RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RGPD8O14715 1765 aaPredicted RBP0.34□□□□□ -2.36
TRAPPC13-209ENST00000508304 RGPD5Q99666 1765 aa0.34□□□□□ -2.36
TRAPPC13-209ENST00000508304 CNOT1A5YKK6 2376 aaKnown RBP0.33□□□□□ -2.36
TRAPPC13-209ENST00000508304 EP300Q09472 2414 aaPredicted RBP0.32□□□□□ -2.36
TRAPPC13-209ENST00000508304 FSIP2Q5CZC0 6907 aa0.32□□□□□ -2.36
TRAPPC13-209ENST00000508304 M0R2T5 61 aa0.32□□□□□ -2.36
TRAPPC13-209ENST00000508304 SMIM13P0DJ93 91 aa0.32□□□□□ -2.36
TRAPPC13-209ENST00000508304 POLR1AO95602 1720 aaPredicted RBP0.32□□□□□ -2.36
TRAPPC13-209ENST00000508304 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
TRAPPC13-209ENST00000508304 IFI6P09912 130 aa0.31□□□□□ -2.36
TRAPPC13-209ENST00000508304 LELP1Q5T871 98 aa0.31□□□□□ -2.36
TRAPPC13-209ENST00000508304 CACNA1AO00555 2505 aa0.31□□□□□ -2.36
TRAPPC13-209ENST00000508304 REV3LO60673 3130 aa0.31□□□□□ -2.36
TRAPPC13-209ENST00000508304 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
TRAPPC13-209ENST00000508304 RRBP1Q9P2E9 1410 aaKnown RBP0.3□□□□□ -2.36
TRAPPC13-209ENST00000508304 TIAM2Q8IVF5 1701 aa0.3□□□□□ -2.36
TRAPPC13-209ENST00000508304 MAGI3Q5TCQ9 1506 aa0.3□□□□□ -2.36
TRAPPC13-209ENST00000508304 WNK1Q9H4A3 2382 aa0.3□□□□□ -2.36
TRAPPC13-209ENST00000508304 PRM1P04553 51 aa0.3□□□□□ -2.36
TRAPPC13-209ENST00000508304 NREPQ16612 68 aa0.3□□□□□ -2.36
TRAPPC13-209ENST00000508304 DEFB121Q5J5C9 76 aa0.3□□□□□ -2.36
TRAPPC13-209ENST00000508304 NDUFA3O95167 84 aa0.29□□□□□ -2.36
TRAPPC13-209ENST00000508304 ANKARQ7Z5J8 1434 aa0.29□□□□□ -2.36
TRAPPC13-209ENST00000508304 NWD1Q149M9 1564 aa0.28□□□□□ -2.36
TRAPPC13-209ENST00000508304 TNRC6CQ9HCJ0 1690 aaKnown RBP0.28□□□□□ -2.36
TRAPPC13-209ENST00000508304 DEFB135Q30KP9 77 aa0.28□□□□□ -2.36
TRAPPC13-209ENST00000508304 C18orf32Q8TCD1 76 aa0.28□□□□□ -2.36
TRAPPC13-209ENST00000508304 APC2O95996 2303 aa0.28□□□□□ -2.36
TRAPPC13-209ENST00000508304 FLNCQ14315 2725 aa0.28□□□□□ -2.37
TRAPPC13-209ENST00000508304 CFAP74Q9C0B2 1584 aa0.28□□□□□ -2.37
TRAPPC13-209ENST00000508304 KNL1Q8NG31 2342 aa0.27□□□□□ -2.37
TRAPPC13-209ENST00000508304 CCDC88BA6NC98 1476 aa0.27□□□□□ -2.37
TRAPPC13-209ENST00000508304 CEP170BQ9Y4F5 1589 aaPredicted RBP0.27□□□□□ -2.37
TRAPPC13-209ENST00000508304 DOT1LQ8TEK3 1739 aa0.27□□□□□ -2.37
TRAPPC13-209ENST00000508304 ARFGEF2Q9Y6D5 1785 aa0.27□□□□□ -2.37
TRAPPC13-209ENST00000508304 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
TRAPPC13-209ENST00000508304 NDUFA4O00483 81 aa0.26□□□□□ -2.37
TRAPPC13-209ENST00000508304 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
TRAPPC13-209ENST00000508304 DCHS2Q6V1P9 2916 aa0.26□□□□□ -2.37
TRAPPC13-209ENST00000508304 BSNQ9UPA5 3926 aa0.25□□□□□ -2.37
TRAPPC13-209ENST00000508304 C3orf79P0CE67 100 aa0.25□□□□□ -2.37
TRAPPC13-209ENST00000508304 SPRR2DP22532 72 aa0.25□□□□□ -2.37
TRAPPC13-209ENST00000508304 PRO3102Q9H379 93 aa0.25□□□□□ -2.37
TRAPPC13-209ENST00000508304 ZNF831Q5JPB2 1677 aa0.24□□□□□ -2.37
TRAPPC13-209ENST00000508304 H0YGG7 62 aa0.24□□□□□ -2.37
TRAPPC13-209ENST00000508304 H3BVH4 76 aa0.24□□□□□ -2.37
TRAPPC13-209ENST00000508304 HMGA1P17096 107 aaKnown RBP0.24□□□□□ -2.37
TRAPPC13-209ENST00000508304 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
TRAPPC13-209ENST00000508304 FAT2Q9NYQ8 4349 aa0.24□□□□□ -2.37
TRAPPC13-209ENST00000508304 NESP48681 1621 aa0.24□□□□□ -2.37
TRAPPC13-209ENST00000508304 MAP3K1Q13233 1512 aa0.23□□□□□ -2.37
TRAPPC13-209ENST00000508304 SETXQ7Z333 2677 aaKnown RBP0.23□□□□□ -2.37
TRAPPC13-209ENST00000508304 FLNAP21333 2647 aaKnown RBP0.23□□□□□ -2.37
TRAPPC13-209ENST00000508304 PDE4DIPQ5VU43 2346 aa0.22□□□□□ -2.37
TRAPPC13-209ENST00000508304 CFAP43Q8NDM7 1665 aa0.22□□□□□ -2.37
TRAPPC13-209ENST00000508304 LINC00158P58513 81 aa0.22□□□□□ -2.37
TRAPPC13-209ENST00000508304 PTPN23Q9H3S7 1636 aa0.22□□□□□ -2.37
TRAPPC13-209ENST00000508304 TNXBP22105 4242 aa0.21□□□□□ -2.38
TRAPPC13-209ENST00000508304 TRANK1O15050 2925 aa0.21□□□□□ -2.38
TRAPPC13-209ENST00000508304 DEFA5Q01523 94 aa0.21□□□□□ -2.38
TRAPPC13-209ENST00000508304 C4AP0C0L4 1744 aa0.21□□□□□ -2.38
TRAPPC13-209ENST00000508304 C4BP0C0L5 1744 aa0.21□□□□□ -2.38
TRAPPC13-209ENST00000508304 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
TRAPPC13-209ENST00000508304 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
TRAPPC13-209ENST00000508304 MRPL33O75394 65 aaKnown RBP0.19□□□□□ -2.38
TRAPPC13-209ENST00000508304 HFM1A2PYH4 1435 aa0.19□□□□□ -2.38
TRAPPC13-209ENST00000508304 ANKRD50Q9ULJ7 1429 aa0.19□□□□□ -2.38
TRAPPC13-209ENST00000508304 LCE6AA0A183 80 aa0.18□□□□□ -2.38
TRAPPC13-209ENST00000508304 SMCO4Q9NRQ5 59 aa0.18□□□□□ -2.38
TRAPPC13-209ENST00000508304 ACANP16112 2415 aa0.18□□□□□ -2.38
TRAPPC13-209ENST00000508304 ABCA8O94911 1581 aa0.17□□□□□ -2.38
TRAPPC13-209ENST00000508304 DDX60LQ5H9U9 1706 aaKnown RBP0.17□□□□□ -2.38
TRAPPC13-209ENST00000508304 RICTORQ6R327 1708 aa0.17□□□□□ -2.38
TRAPPC13-209ENST00000508304 UBL5Q9BZL1 73 aa0.17□□□□□ -2.38
TRAPPC13-209ENST00000508304 PLCH1Q4KWH8 1693 aa0.17□□□□□ -2.38
TRAPPC13-209ENST00000508304 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
TRAPPC13-209ENST00000508304 CICQ96RK0 1608 aaPredicted RBP0.16□□□□□ -2.38
TRAPPC13-209ENST00000508304 RALGAPBQ86X10 1494 aa0.16□□□□□ -2.38
TRAPPC13-209ENST00000508304 MYCBP2O75592 4640 aa0.16□□□□□ -2.38
TRAPPC13-209ENST00000508304 LMTK2Q8IWU2 1503 aa0.16□□□□□ -2.38
TRAPPC13-209ENST00000508304 SCN11AQ9UI33 1791 aa0.16□□□□□ -2.38
TRAPPC13-209ENST00000508304 LPAP08519 4548 aa0.16□□□□□ -2.38
TRAPPC13-209ENST00000508304 PDCD5O14737 125 aa0.15□□□□□ -2.39
TRAPPC13-209ENST00000508304 GNG13Q9P2W3 67 aa0.15□□□□□ -2.39
TRAPPC13-209ENST00000508304 HECTD4Q9Y4D8 3996 aa0.14□□□□□ -2.39
TRAPPC13-209ENST00000508304 ALMS1Q8TCU4 4167 aa0.14□□□□□ -2.39
TRAPPC13-209ENST00000508304 HSPG2P98160 4391 aa0.14□□□□□ -2.39
TRAPPC13-209ENST00000508304 PCNX1Q96RV3 2341 aa0.14□□□□□ -2.39
TRAPPC13-209ENST00000508304 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
TRAPPC13-209ENST00000508304 UGGT2Q9NYU1 1516 aa0.13□□□□□ -2.39
TRAPPC13-209ENST00000508304 ADAMTS12P58397 1594 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 DEFB131BA0A096LNP1 70 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 SPRR2BP35325 72 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 ATXN8Q156A1 80 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 ENHOQ6UWT2 76 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 MYO5CQ9NQX4 1742 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 DUOX2Q9NRD8 1548 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 CREBBPQ92793 2442 aa0.12□□□□□ -2.39
TRAPPC13-209ENST00000508304 THOC2Q8NI27 1593 aaKnown RBP0.11□□□□□ -2.39
TRAPPC13-209ENST00000508304 PRKDCP78527 4128 aaKnown RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms