RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.14□□□□□ -2.43
SMN2-208ENST00000508258 DIP2BQ9P265 1576 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 CEBPZOSA8MTT3 80 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 DEFB135Q30KP9 77 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 COX6B2Q6YFQ2 88 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 WFDC13Q8IUB5 93 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 DOT1LQ8TEK3 1739 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 GPR98Q8WXG9 6306 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 URB2Q14146 1524 aaKnown RBP-0.14□□□□□ -2.43
SMN2-208ENST00000508258 DCHS2Q6V1P9 2916 aa-0.14□□□□□ -2.43
SMN2-208ENST00000508258 ADAMTS12P58397 1594 aa-0.15□□□□□ -2.43
SMN2-208ENST00000508258 PIK3C2BO00750 1634 aa-0.15□□□□□ -2.43
SMN2-208ENST00000508258 PTPN23Q9H3S7 1636 aa-0.15□□□□□ -2.43
SMN2-208ENST00000508258 RPL38P63173 70 aaKnown RBP-0.15□□□□□ -2.43
SMN2-208ENST00000508258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.15□□□□□ -2.43
SMN2-208ENST00000508258 SPTA1P02549 2419 aa-0.15□□□□□ -2.43
SMN2-208ENST00000508258 NSD1Q96L73 2696 aaPredicted RBP-0.15□□□□□ -2.43
SMN2-208ENST00000508258 NWD1Q149M9 1564 aa-0.15□□□□□ -2.43
SMN2-208ENST00000508258 C4AP0C0L4 1744 aa-0.16□□□□□ -2.43
SMN2-208ENST00000508258 C4BP0C0L5 1744 aa-0.16□□□□□ -2.43
SMN2-208ENST00000508258 NCOA2Q15596 1464 aa-0.16□□□□□ -2.43
SMN2-208ENST00000508258 NESP48681 1621 aa-0.16□□□□□ -2.43
SMN2-208ENST00000508258 CICQ96RK0 1608 aaPredicted RBP-0.16□□□□□ -2.43
SMN2-208ENST00000508258 SETXQ7Z333 2677 aaKnown RBP-0.16□□□□□ -2.43
SMN2-208ENST00000508258 KANTRA0A1W2PQU2 76 aa-0.16□□□□□ -2.44
SMN2-208ENST00000508258 WFDC9Q8NEX5 89 aa-0.16□□□□□ -2.44
SMN2-208ENST00000508258 MUC2Q02817 5179 aa-0.16□□□□□ -2.44
SMN2-208ENST00000508258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.16□□□□□ -2.44
SMN2-208ENST00000508258 DCAF1Q9Y4B6 1507 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 CHD8Q9HCK8 2581 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 SSPOA2VEC9 5147 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 NDUFB1O75438 58 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 NDUFA3O95167 84 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 ZANQ9Y493 2812 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 ARFGEF2Q9Y6D5 1785 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 CCDC88BA6NC98 1476 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 CCDC18Q5T9S5 1454 aa-0.17□□□□□ -2.44
SMN2-208ENST00000508258 FLNAP21333 2647 aaKnown RBP-0.17□□□□□ -2.44
SMN2-208ENST00000508258 TENM2Q9NT68 2774 aa-0.18□□□□□ -2.44
SMN2-208ENST00000508258 ST20Q9HBF5 79 aa-0.18□□□□□ -2.44
SMN2-208ENST00000508258 ERVK-7P63135 1459 aa-0.18□□□□□ -2.44
SMN2-208ENST00000508258 ARHGAP35Q9NRY4 1499 aa-0.18□□□□□ -2.44
SMN2-208ENST00000508258 STAB1Q9NY15 2570 aa-0.18□□□□□ -2.44
SMN2-208ENST00000508258 KDM5DQ9BY66 1539 aa-0.18□□□□□ -2.44
SMN2-208ENST00000508258 PLXNC1O60486 1568 aa-0.19□□□□□ -2.44
SMN2-208ENST00000508258 WNK1Q9H4A3 2382 aa-0.19□□□□□ -2.44
SMN2-208ENST00000508258 FLNBO75369 2602 aaKnown RBP-0.19□□□□□ -2.44
SMN2-208ENST00000508258 DEFB121Q5J5C9 76 aa-0.19□□□□□ -2.44
SMN2-208ENST00000508258 WIZO95785 1651 aa-0.19□□□□□ -2.44
SMN2-208ENST00000508258 SCN11AQ9UI33 1791 aa-0.19□□□□□ -2.44
SMN2-208ENST00000508258 CFAP74Q9C0B2 1584 aa-0.19□□□□□ -2.44
SMN2-208ENST00000508258 APC2O95996 2303 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 SVEP1Q4LDE5 3571 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 ACANP16112 2415 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 LCE6AA0A183 80 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 IFI6P09912 130 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 SPRR2AP35326 72 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 ADIRFQ15847 76 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 KRTAP6-2Q3LI66 62 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 ATP5EP2Q5VTU8 51 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 S100A13Q99584 98 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 FSIP2Q5CZC0 6907 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 MAP1BP46821 2468 aaKnown RBP-0.2□□□□□ -2.44
SMN2-208ENST00000508258 PKHD1P08F94 4074 aa-0.2□□□□□ -2.44
SMN2-208ENST00000508258 CFAP43Q8NDM7 1665 aa-0.21□□□□□ -2.44
SMN2-208ENST00000508258 FLGP20930 4061 aaPredicted RBP-0.21□□□□□ -2.44
SMN2-208ENST00000508258 PCNX1Q96RV3 2341 aa-0.21□□□□□ -2.44
SMN2-208ENST00000508258 ABCC1P33527 1531 aa-0.21□□□□□ -2.44
SMN2-208ENST00000508258 UMAD1C9J7I0 102 aa-0.21□□□□□ -2.44
SMN2-208ENST00000508258 MAP1AP78559 2803 aaPredicted RBP-0.22□□□□□ -2.44
SMN2-208ENST00000508258 H3BUT2 72 aa-0.22□□□□□ -2.44
SMN2-208ENST00000508258 BVES-AS1Q5T3Y7 98 aa-0.22□□□□□ -2.44
SMN2-208ENST00000508258 PLCH1Q4KWH8 1693 aa-0.22□□□□□ -2.44
SMN2-208ENST00000508258 TRANK1O15050 2925 aa-0.22□□□□□ -2.45
SMN2-208ENST00000508258 SYNE2Q8WXH0 6885 aaKnown RBP-0.22□□□□□ -2.45
SMN2-208ENST00000508258 CD163L1Q9NR16 1453 aa-0.22□□□□□ -2.45
SMN2-208ENST00000508258 DEPDC5O75140 1603 aa-0.23□□□□□ -2.45
SMN2-208ENST00000508258 MUC12Q9UKN1 5478 aa-0.23□□□□□ -2.45
SMN2-208ENST00000508258 C3orf79P0CE67 100 aa-0.23□□□□□ -2.45
SMN2-208ENST00000508258 HMGA1P17096 107 aaKnown RBP-0.23□□□□□ -2.45
SMN2-208ENST00000508258 IFI27P40305 119 aaPredicted RBP-0.23□□□□□ -2.45
SMN2-208ENST00000508258 NREPQ16612 68 aa-0.23□□□□□ -2.45
SMN2-208ENST00000508258 PRO3102Q9H379 93 aa-0.23□□□□□ -2.45
SMN2-208ENST00000508258 PDZD2O15018 2839 aa-0.23□□□□□ -2.45
SMN2-208ENST00000508258 AKAP13Q12802 2813 aa-0.23□□□□□ -2.45
SMN2-208ENST00000508258 SRRM2Q9UQ35 2752 aaKnown RBP-0.23□□□□□ -2.45
SMN2-208ENST00000508258 SCRIBQ14160 1630 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 DDX60LQ5H9U9 1706 aaKnown RBP-0.24□□□□□ -2.45
SMN2-208ENST00000508258 RICTORQ6R327 1708 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 H0YAA0 97 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 NDUFA4O00483 81 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 SPRR2EP22531 72 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 LINC00158P58513 81 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 KRTAP19-7Q3SYF9 63 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 CNOT1A5YKK6 2376 aaKnown RBP-0.24□□□□□ -2.45
SMN2-208ENST00000508258 ABCA8O94911 1581 aa-0.24□□□□□ -2.45
SMN2-208ENST00000508258 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.24□□□□□ -2.45
SMN2-208ENST00000508258 PKD1P98161 4303 aa-0.25□□□□□ -2.45
SMN2-208ENST00000508258 FAT3Q8TDW7 4589 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms