RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 PLA2G2DQ9UNK4 145 aa4.7□□□□□ -1.66
SYNPO2-205ENST00000504178 CHD7Q9P2D1 2997 aa4.7□□□□□ -1.66
SYNPO2-205ENST00000504178 SSBP3-AS1Q7Z2R9 100 aa4.7□□□□□ -1.66
SYNPO2-205ENST00000504178 TLX1NBP0CAT3 122 aa4.7□□□□□ -1.66
SYNPO2-205ENST00000504178 GIG44P09565 113 aaPredicted RBP4.7□□□□□ -1.66
SYNPO2-205ENST00000504178 LINC01600Q96MT4 127 aa4.7□□□□□ -1.66
SYNPO2-205ENST00000504178 ERC2-IT1O76042 136 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 NCOR2Q9Y618 2525 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 LINC00336Q6ZUF6 198 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 PRR15Q8IV56 129 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 CSPG4Q6UVK1 2322 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 BPTFQ12830 3046 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 SONP18583 2426 aaKnown RBP4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 ATRXP46100 2492 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 LINC00612Q8N6U2 182 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 ANAPC11Q9NYG5 84 aa4.69□□□□□ -1.66
SYNPO2-205ENST00000504178 ACACBO00763 2458 aa4.68□□□□□ -1.66
SYNPO2-205ENST00000504178 Q8N377 158 aa4.68□□□□□ -1.66
SYNPO2-205ENST00000504178 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
SYNPO2-205ENST00000504178 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
SYNPO2-205ENST00000504178 SPTBN4Q9H254 2564 aa4.68□□□□□ -1.66
SYNPO2-205ENST00000504178 IGLV5-37A0A075B6J1 123 aa4.67□□□□□ -1.66
SYNPO2-205ENST00000504178 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
SYNPO2-205ENST00000504178 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
SYNPO2-205ENST00000504178 CASC10Q5T4H9 136 aa4.66□□□□□ -1.66
SYNPO2-205ENST00000504178 PSORS1C2Q9UIG4 136 aa4.66□□□□□ -1.66
SYNPO2-205ENST00000504178 TRIOO75962 3097 aa4.66□□□□□ -1.66
SYNPO2-205ENST00000504178 WDFY3Q8IZQ1 3526 aa4.65□□□□□ -1.66
SYNPO2-205ENST00000504178 UQCR11O14957 56 aa4.65□□□□□ -1.66
SYNPO2-205ENST00000504178 CFAP54Q96N23 3096 aa4.65□□□□□ -1.66
SYNPO2-205ENST00000504178 EIF4EBP3O60516 100 aaPredicted RBP4.65□□□□□ -1.67
SYNPO2-205ENST00000504178 ZNF575Q86XF7 245 aa4.65□□□□□ -1.67
SYNPO2-205ENST00000504178 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
SYNPO2-205ENST00000504178 LAMA1P25391 3075 aa4.65□□□□□ -1.67
SYNPO2-205ENST00000504178 KRTAP1-3Q8IUG1 177 aa4.65□□□□□ -1.67
SYNPO2-205ENST00000504178 NAV2Q8IVL1 2488 aa4.64□□□□□ -1.67
SYNPO2-205ENST00000504178 A8MUN3 132 aa4.64□□□□□ -1.67
SYNPO2-205ENST00000504178 CNBPP62633 177 aaKnown RBP4.64□□□□□ -1.67
SYNPO2-205ENST00000504178 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
SYNPO2-205ENST00000504178 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
SYNPO2-205ENST00000504178 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
SYNPO2-205ENST00000504178 ABCA2Q9BZC7 2435 aa4.63□□□□□ -1.67
SYNPO2-205ENST00000504178 MYO18BQ8IUG5 2567 aa4.62□□□□□ -1.67
SYNPO2-205ENST00000504178 KRTAP1-1Q07627 177 aa4.61□□□□□ -1.67
SYNPO2-205ENST00000504178 ASPMQ8IZT6 3477 aa4.6□□□□□ -1.67
SYNPO2-205ENST00000504178 CCDC168Q8NDH2 2452 aa4.6□□□□□ -1.67
SYNPO2-205ENST00000504178 LINC01554Q52M75 96 aa4.59□□□□□ -1.67
SYNPO2-205ENST00000504178 Q8N1X5 172 aa4.59□□□□□ -1.67
SYNPO2-205ENST00000504178 FREM2Q5SZK8 3169 aa4.59□□□□□ -1.67
SYNPO2-205ENST00000504178 IGLV5-48A0A075B6I7 105 aa4.59□□□□□ -1.68
SYNPO2-205ENST00000504178 A0A0D9SG42 100 aa4.58□□□□□ -1.68
SYNPO2-205ENST00000504178 CHD8Q9HCK8 2581 aa4.57□□□□□ -1.68
SYNPO2-205ENST00000504178 A0A1W2PNM2 257 aa4.57□□□□□ -1.68
SYNPO2-205ENST00000504178 KLKP1Q107X0 134 aa4.57□□□□□ -1.68
SYNPO2-205ENST00000504178 TNP2Q05952 138 aa4.57□□□□□ -1.68
SYNPO2-205ENST00000504178 FAM104AQ969W3 186 aa4.57□□□□□ -1.68
SYNPO2-205ENST00000504178 Q6ZSA8 131 aa4.55□□□□□ -1.68
SYNPO2-205ENST00000504178 ZFYVE26Q68DK2 2539 aa4.55□□□□□ -1.68
SYNPO2-205ENST00000504178 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
SYNPO2-205ENST00000504178 CD164Q04900 197 aa4.54□□□□□ -1.68
SYNPO2-205ENST00000504178 LRRK2Q5S007 2527 aa4.54□□□□□ -1.68
SYNPO2-205ENST00000504178 PIEZO1Q92508 2521 aa4.54□□□□□ -1.68
SYNPO2-205ENST00000504178 PRRC2CQ9Y520 2896 aaKnown RBP4.54□□□□□ -1.68
SYNPO2-205ENST00000504178 H7BZZ5 65 aa4.53□□□□□ -1.68
SYNPO2-205ENST00000504178 SPANXA2-OT1Q8N9U9 137 aa4.53□□□□□ -1.68
SYNPO2-205ENST00000504178 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
SYNPO2-205ENST00000504178 PRR26Q8N8Z3 221 aa4.53□□□□□ -1.68
SYNPO2-205ENST00000504178 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.52□□□□□ -1.69
SYNPO2-205ENST00000504178 ZNF462Q96JM2 2506 aa4.52□□□□□ -1.69
SYNPO2-205ENST00000504178 DMDP11532 3685 aa4.52□□□□□ -1.69
SYNPO2-205ENST00000504178 ANKRD11Q6UB99 2663 aaPredicted RBP4.52□□□□□ -1.69
SYNPO2-205ENST00000504178 REV3LO60673 3130 aa4.51□□□□□ -1.69
SYNPO2-205ENST00000504178 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
SYNPO2-205ENST00000504178 CACNA1AO00555 2505 aa4.51□□□□□ -1.69
SYNPO2-205ENST00000504178 CFAP47Q6ZTR5 3102 aa4.51□□□□□ -1.69
SYNPO2-205ENST00000504178 TNRC18O15417 2968 aaPredicted RBP4.51□□□□□ -1.69
SYNPO2-205ENST00000504178 MUC4Q99102 2169 aa4.51□□□□□ -1.69
SYNPO2-205ENST00000504178 M0R2T5 61 aa4.49□□□□□ -1.69
SYNPO2-205ENST00000504178 JMJD1CQ15652 2540 aa4.48□□□□□ -1.69
SYNPO2-205ENST00000504178 FASNP49327 2511 aaKnown RBP4.48□□□□□ -1.69
SYNPO2-205ENST00000504178 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
SYNPO2-205ENST00000504178 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
SYNPO2-205ENST00000504178 PLAC8Q9NZF1 115 aa4.46□□□□□ -1.7
SYNPO2-205ENST00000504178 S4R3F8 94 aa4.45□□□□□ -1.7
SYNPO2-205ENST00000504178 MGAQ8IWI9 3026 aa4.45□□□□□ -1.7
SYNPO2-205ENST00000504178 DOPEY1Q5JWR5 2465 aa4.45□□□□□ -1.7
SYNPO2-205ENST00000504178 ANKRD17O75179 2603 aaKnown RBP4.45□□□□□ -1.7
SYNPO2-205ENST00000504178 LCA10Q71F78 164 aa4.45□□□□□ -1.7
SYNPO2-205ENST00000504178 HRES1P13985 223 aa4.44□□□□□ -1.7
SYNPO2-205ENST00000504178 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
SYNPO2-205ENST00000504178 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
SYNPO2-205ENST00000504178 POLQO75417 2590 aa4.44□□□□□ -1.7
SYNPO2-205ENST00000504178 TLN2Q9Y4G6 2542 aa4.44□□□□□ -1.7
SYNPO2-205ENST00000504178 ZCCHC13Q8WW36 166 aaKnown RBP4.44□□□□□ -1.7
SYNPO2-205ENST00000504178 ZFHX4Q86UP3 3567 aa4.43□□□□□ -1.7
SYNPO2-205ENST00000504178 FRYLO94915 3013 aa4.43□□□□□ -1.7
SYNPO2-205ENST00000504178 CHD9Q3L8U1 2897 aa4.43□□□□□ -1.7
SYNPO2-205ENST00000504178 WIPF1O43516 503 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms