RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 BIVM-ERCC5R4GMW8 1640 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 ABCC6O95255 1503 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 VPS13DQ5THJ4 4388 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 TRBV6-1A0A0K0K1D8 114 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 UMAD1C9J7I0 102 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 PLXNC1O60486 1568 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 NWD1Q149M9 1564 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 ALS2Q96Q42 1657 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 TNRC6CQ9HCJ0 1690 aaKnown RBP0.3□□□□□ -2.36
VPS26A-208ENST00000497022 TRANK1O15050 2925 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 LRRC37AA6NMS7 1700 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 FAT3Q8TDW7 4589 aa0.3□□□□□ -2.36
VPS26A-208ENST00000497022 AHCTF1Q8WYP5 2266 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 DNAH6Q9C0G6 4158 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 KANTRA0A1W2PQU2 76 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 K7EQZ3 153 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 ACYP1P07311 99 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 DEFB123Q8N688 67 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 SMIM4Q8WVI0 70 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 SMR3AQ99954 134 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 C4AP0C0L4 1744 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 C4BP0C0L5 1744 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 DNAH7Q8WXX0 4024 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 PLCE1Q9P212 2302 aa0.29□□□□□ -2.36
VPS26A-208ENST00000497022 CLASP1Q7Z460 1538 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 DNAH10Q8IVF4 4471 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 ATRQ13535 2644 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 LY75O60449 1722 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 A0A1B0GUT8 65 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 K7EMI3 77 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 PIN1P1O15428 100 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 COX8AP10176 69 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 IFI27P40305 119 aaPredicted RBP0.28□□□□□ -2.36
VPS26A-208ENST00000497022 GNGT1P63211 74 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 HMGN3Q15651 99 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 NREPQ16612 68 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 SPINK6Q6UWN8 80 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 UBE2DNLQ8IWF7 75 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 WFDC9Q8NEX5 89 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 F8P00451 2351 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
VPS26A-208ENST00000497022 DSPP15924 2871 aaKnown RBP0.27□□□□□ -2.37
VPS26A-208ENST00000497022 C3P01024 1663 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 ANK3Q12955 4377 aaKnown RBP0.27□□□□□ -2.37
VPS26A-208ENST00000497022 LRP1BQ9NZR2 4599 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 DNAH8Q96JB1 4490 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 LOC730098B7Z3J9 87 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 C3orf79P0CE67 100 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 COX7BP24311 80 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 COX6A2Q02221 97 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
VPS26A-208ENST00000497022 C2CD3Q4AC94 2353 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 ABCA10Q8WWZ4 1543 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 MAST1Q9Y2H9 1570 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 PDZD2O15018 2839 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 TOGARAM1Q9Y4F4 1720 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 DNAH1Q9P2D7 4330 aa0.27□□□□□ -2.37
VPS26A-208ENST00000497022 IGF2RP11717 2491 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 ABCA12Q86UK0 2595 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 A0A0D9SFI3 127 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 H0YAA0 97 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 SFTA3P0C7M3 94 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 SPRR1AP35321 89 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 KRTAP21-1Q3LI58 79 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 ATP5EP2Q5VTU8 51 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 GAFA1Q96PS6 74 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 PRO3102Q9H379 93 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 TP53AIP1Q9HCN2 124 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 UGGT1Q9NYU2 1555 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 NRXN3Q9Y4C0 1643 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 VWFP04275 2813 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 CELSR1Q9NYQ6 3014 aa0.26□□□□□ -2.37
VPS26A-208ENST00000497022 PLECQ15149 4684 aaKnown RBP0.25□□□□□ -2.37
VPS26A-208ENST00000497022 DYNC1H1Q14204 4646 aaKnown RBP0.25□□□□□ -2.37
VPS26A-208ENST00000497022 BPTFQ12830 3046 aa0.25□□□□□ -2.37
VPS26A-208ENST00000497022 PRRC2CQ9Y520 2896 aaKnown RBP0.25□□□□□ -2.37
VPS26A-208ENST00000497022 DDX60LQ5H9U9 1706 aaKnown RBP0.25□□□□□ -2.37
VPS26A-208ENST00000497022 ANKRD50Q9ULJ7 1429 aa0.25□□□□□ -2.37
VPS26A-208ENST00000497022 A0A087WWC5 75 aa0.25□□□□□ -2.37
VPS26A-208ENST00000497022 H3BVH4 76 aa0.25□□□□□ -2.37
VPS26A-208ENST00000497022 SMIM11AP58511 58 aa0.25□□□□□ -2.37
VPS26A-208ENST00000497022 KLK9Q2XQG4 91 aa0.25□□□□□ -2.37
VPS26A-208ENST00000497022 PRO0255Q9UI72 69 aa0.25□□□□□ -2.37
VPS26A-208ENST00000497022 FLGP20930 4061 aaPredicted RBP0.25□□□□□ -2.37
VPS26A-208ENST00000497022 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 LRP2P98164 4655 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 SYCP2Q9BX26 1530 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 CNOT1A5YKK6 2376 aaKnown RBP0.24□□□□□ -2.37
VPS26A-208ENST00000497022 PTPRZ1P23471 2315 aaPredicted RBP0.24□□□□□ -2.37
VPS26A-208ENST00000497022 AKAP9Q99996 3911 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 A0A087WXM4 84 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 CPSF4LA6NMK7 179 aaKnown RBP0.24□□□□□ -2.37
VPS26A-208ENST00000497022 NDUFA4O00483 81 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 ENHOQ6UWT2 76 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 MRPL34Q9BQ48 92 aaKnown RBP0.24□□□□□ -2.37
VPS26A-208ENST00000497022 TENM4Q6N022 2769 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 DYNC2H1Q8NCM8 4307 aaKnown RBP0.24□□□□□ -2.37
VPS26A-208ENST00000497022 NBPF19A0A087WUL8 3843 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 SPTBN2O15020 2390 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms