RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 SPTBN4Q9H254 2564 aa6.6□□□□□ -1.35
LINC00488-201ENST00000494582 RBM12B-AS1Q9P1G2 102 aa6.59□□□□□ -1.35
LINC00488-201ENST00000494582 PRR34Q9NV39 138 aa6.59□□□□□ -1.35
LINC00488-201ENST00000494582 ABCA12Q86UK0 2595 aa6.59□□□□□ -1.36
LINC00488-201ENST00000494582 OTOGQ6ZRI0 2925 aa6.59□□□□□ -1.36
LINC00488-201ENST00000494582 DSCR9P59020 149 aa6.58□□□□□ -1.36
LINC00488-201ENST00000494582 DEFB116Q30KQ4 102 aa6.58□□□□□ -1.36
LINC00488-201ENST00000494582 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
LINC00488-201ENST00000494582 CMC4P56277 68 aaPredicted RBP6.57□□□□□ -1.36
LINC00488-201ENST00000494582 LCA10Q71F78 164 aa6.57□□□□□ -1.36
LINC00488-201ENST00000494582 Q8N9P0 234 aaPredicted RBP6.57□□□□□ -1.36
LINC00488-201ENST00000494582 TNP2Q05952 138 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 A0A0G2JQZ4 141 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 A0A1W2PNN7 141 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 UBE2BP63146 152 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 C1orf137Q5JT78 98 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 CCDC168Q8NDH2 2452 aa6.56□□□□□ -1.36
LINC00488-201ENST00000494582 VWFP04275 2813 aa6.55□□□□□ -1.36
LINC00488-201ENST00000494582 Q8NBF4 154 aa6.55□□□□□ -1.36
LINC00488-201ENST00000494582 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
LINC00488-201ENST00000494582 B9D2Q9BPU9 175 aa6.55□□□□□ -1.36
LINC00488-201ENST00000494582 MYO18BQ8IUG5 2567 aa6.55□□□□□ -1.36
LINC00488-201ENST00000494582 HCG22E2RYF7 251 aa6.54□□□□□ -1.36
LINC00488-201ENST00000494582 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
LINC00488-201ENST00000494582 Q9BRP9 147 aa6.54□□□□□ -1.36
LINC00488-201ENST00000494582 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
LINC00488-201ENST00000494582 SERTAD4-AS1Q5TG53 156 aa6.54□□□□□ -1.36
LINC00488-201ENST00000494582 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
LINC00488-201ENST00000494582 PKD1L2Q7Z442 2459 aa6.53□□□□□ -1.36
LINC00488-201ENST00000494582 UBE2AP49459 152 aa6.53□□□□□ -1.36
LINC00488-201ENST00000494582 EGFEM1PQ0D2K5 195 aa6.53□□□□□ -1.36
LINC00488-201ENST00000494582 LELP1Q5T871 98 aa6.53□□□□□ -1.36
LINC00488-201ENST00000494582 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
LINC00488-201ENST00000494582 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
LINC00488-201ENST00000494582 ACACBO00763 2458 aa6.53□□□□□ -1.36
LINC00488-201ENST00000494582 HTN3P15516 51 aa6.52□□□□□ -1.37
LINC00488-201ENST00000494582 KRTAP26-1Q6PEX3 210 aa6.52□□□□□ -1.37
LINC00488-201ENST00000494582 C15orf56Q8N910 161 aa6.52□□□□□ -1.37
LINC00488-201ENST00000494582 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
LINC00488-201ENST00000494582 C7orf33Q8WU49 177 aa6.52□□□□□ -1.37
LINC00488-201ENST00000494582 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
LINC00488-201ENST00000494582 FAM208BQ5VWN6 2430 aa6.52□□□□□ -1.37
LINC00488-201ENST00000494582 A6NN06 94 aa6.51□□□□□ -1.37
LINC00488-201ENST00000494582 UNC79Q9P2D8 2635 aa6.51□□□□□ -1.37
LINC00488-201ENST00000494582 DEFB135Q30KP9 77 aa6.5□□□□□ -1.37
LINC00488-201ENST00000494582 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
LINC00488-201ENST00000494582 LYRM9A8MSI8 78 aa6.5□□□□□ -1.37
LINC00488-201ENST00000494582 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
LINC00488-201ENST00000494582 ITPR3Q14573 2671 aa6.5□□□□□ -1.37
LINC00488-201ENST00000494582 HIVEP2P31629 2446 aa6.5□□□□□ -1.37
LINC00488-201ENST00000494582 NDUFB1O75438 58 aa6.49□□□□□ -1.37
LINC00488-201ENST00000494582 A0A1B0GW54 56 aa6.49□□□□□ -1.37
LINC00488-201ENST00000494582 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
LINC00488-201ENST00000494582 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
LINC00488-201ENST00000494582 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
LINC00488-201ENST00000494582 F8P00451 2351 aa6.48□□□□□ -1.37
LINC00488-201ENST00000494582 Q6ZRX8 168 aa6.48□□□□□ -1.37
LINC00488-201ENST00000494582 HIVEP1P15822 2718 aa6.48□□□□□ -1.37
LINC00488-201ENST00000494582 MTORP42345 2549 aa6.48□□□□□ -1.37
LINC00488-201ENST00000494582 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
LINC00488-201ENST00000494582 LIMD2Q9BT23 127 aa6.48□□□□□ -1.37
LINC00488-201ENST00000494582 PIEZO1Q92508 2521 aa6.47□□□□□ -1.37
LINC00488-201ENST00000494582 IGSF10Q6WRI0 2623 aa6.47□□□□□ -1.37
LINC00488-201ENST00000494582 FAM168BA1KXE4 195 aa6.47□□□□□ -1.37
LINC00488-201ENST00000494582 MP68P56378 58 aa6.47□□□□□ -1.37
LINC00488-201ENST00000494582 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
LINC00488-201ENST00000494582 Q75L30 129 aa6.47□□□□□ -1.37
LINC00488-201ENST00000494582 IGKV2D-24A0A075B6R9 120 aa6.46□□□□□ -1.37
LINC00488-201ENST00000494582 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.38
LINC00488-201ENST00000494582 A6NED7 52 aa6.46□□□□□ -1.38
LINC00488-201ENST00000494582 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.38
LINC00488-201ENST00000494582 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
LINC00488-201ENST00000494582 DHRS4-AS1Q9P1J3 65 aa6.45□□□□□ -1.38
LINC00488-201ENST00000494582 H0Y9P7 68 aa6.45□□□□□ -1.38
LINC00488-201ENST00000494582 PHF5AQ7RTV0 110 aaKnown RBP6.45□□□□□ -1.38
LINC00488-201ENST00000494582 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
LINC00488-201ENST00000494582 FLNAP21333 2647 aaKnown RBP6.45□□□□□ -1.38
LINC00488-201ENST00000494582 CACNA1AO00555 2505 aa6.45□□□□□ -1.38
LINC00488-201ENST00000494582 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
LINC00488-201ENST00000494582 LINC00476Q8WZB0 136 aa6.44□□□□□ -1.38
LINC00488-201ENST00000494582 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
LINC00488-201ENST00000494582 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
LINC00488-201ENST00000494582 Q8NAQ8 132 aa6.44□□□□□ -1.38
LINC00488-201ENST00000494582 C11orf45Q8TAV5 145 aa6.44□□□□□ -1.38
LINC00488-201ENST00000494582 COA5Q86WW8 74 aa6.43□□□□□ -1.38
LINC00488-201ENST00000494582 MOBPQ13875 183 aa6.42□□□□□ -1.38
LINC00488-201ENST00000494582 ACANP16112 2415 aa6.42□□□□□ -1.38
LINC00488-201ENST00000494582 NDUFS5O43920 106 aa6.42□□□□□ -1.38
LINC00488-201ENST00000494582 SPRR1AP35321 89 aa6.42□□□□□ -1.38
LINC00488-201ENST00000494582 IGFL1Q6UW32 110 aa6.42□□□□□ -1.38
LINC00488-201ENST00000494582 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
LINC00488-201ENST00000494582 KRTAP1-3Q8IUG1 177 aa6.41□□□□□ -1.38
LINC00488-201ENST00000494582 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
LINC00488-201ENST00000494582 A0A087WSZ3 146 aa6.4□□□□□ -1.38
LINC00488-201ENST00000494582 KRTAP10-3P60369 221 aa6.4□□□□□ -1.38
LINC00488-201ENST00000494582 CSMD3Q7Z407 3707 aa6.4□□□□□ -1.39
LINC00488-201ENST00000494582 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.39
LINC00488-201ENST00000494582 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms