RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 GAFA1Q96PS6 74 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 V9GYS6 101 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 REV3LO60673 3130 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 UBR1Q8IWV7 1749 aa-0.41□□□□□ -2.47
CLK1-213ENST00000492793 MYO3AQ8NEV4 1616 aa-0.41□□□□□ -2.47
CLK1-213ENST00000492793 LRRC7Q96NW7 1537 aa-0.41□□□□□ -2.48
CLK1-213ENST00000492793 MYMXA0A1B0GTQ4 84 aa-0.41□□□□□ -2.48
CLK1-213ENST00000492793 S100A16Q96FQ6 103 aaKnown RBP-0.41□□□□□ -2.48
CLK1-213ENST00000492793 RGPD1P0DJD0 1748 aa-0.41□□□□□ -2.48
CLK1-213ENST00000492793 EPPK1P58107 5090 aaKnown RBP-0.41□□□□□ -2.48
CLK1-213ENST00000492793 HERC2O95714 4834 aa-0.41□□□□□ -2.48
CLK1-213ENST00000492793 ALKQ9UM73 1620 aa-0.42□□□□□ -2.48
CLK1-213ENST00000492793 FLGP20930 4061 aaPredicted RBP-0.42□□□□□ -2.48
CLK1-213ENST00000492793 PLIN4Q96Q06 1357 aa-0.42□□□□□ -2.48
CLK1-213ENST00000492793 FAT1Q14517 4588 aa-0.42□□□□□ -2.48
CLK1-213ENST00000492793 TRAV21A0A0B4J279 112 aa-0.42□□□□□ -2.48
CLK1-213ENST00000492793 NDUFA3O95167 84 aa-0.42□□□□□ -2.48
CLK1-213ENST00000492793 CYB5AP00167 134 aa-0.42□□□□□ -2.48
CLK1-213ENST00000492793 QSER1Q2KHR3 1735 aa-0.42□□□□□ -2.48
CLK1-213ENST00000492793 MAP1AP78559 2803 aaPredicted RBP-0.43□□□□□ -2.48
CLK1-213ENST00000492793 SPRR2AP35326 72 aa-0.43□□□□□ -2.48
CLK1-213ENST00000492793 SNRPFP62306 86 aaKnown RBP-0.43□□□□□ -2.48
CLK1-213ENST00000492793 RGPD4Q7Z3J3 1758 aa-0.43□□□□□ -2.48
CLK1-213ENST00000492793 PVALEFA0A1B0GWK0 134 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 RPL38P63173 70 aaKnown RBP-0.44□□□□□ -2.48
CLK1-213ENST00000492793 KRTAP20-2Q3LI61 65 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 COX6B2Q6YFQ2 88 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 LINC00643Q86TS7 51 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 NBASA2RRP1 2371 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 STAB2Q8WWQ8 2551 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 LRRC9Q6ZRR7 1453 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 PDE4DIPQ5VU43 2346 aa-0.44□□□□□ -2.48
CLK1-213ENST00000492793 RGPD3A6NKT7 1758 aaPredicted RBP-0.45□□□□□ -2.48
CLK1-213ENST00000492793 NBEAL1Q6ZS30 2694 aa-0.45□□□□□ -2.48
CLK1-213ENST00000492793 WFDC9Q8NEX5 89 aa-0.45□□□□□ -2.48
CLK1-213ENST00000492793 PREX1Q8TCU6 1659 aa-0.46□□□□□ -2.48
CLK1-213ENST00000492793 CEBPZOSA8MTT3 80 aa-0.46□□□□□ -2.48
CLK1-213ENST00000492793 PDZD2O15018 2839 aa-0.46□□□□□ -2.48
CLK1-213ENST00000492793 ADAMTS12P58397 1594 aa-0.46□□□□□ -2.48
CLK1-213ENST00000492793 TTC37Q6PGP7 1564 aa-0.46□□□□□ -2.48
CLK1-213ENST00000492793 CICQ96RK0 1608 aaPredicted RBP-0.46□□□□□ -2.48
CLK1-213ENST00000492793 PTPN23Q9H3S7 1636 aa-0.46□□□□□ -2.48
CLK1-213ENST00000492793 LYSTQ99698 3801 aa-0.46□□□□□ -2.48
CLK1-213ENST00000492793 MT4P47944 62 aa-0.47□□□□□ -2.48
CLK1-213ENST00000492793 TDRG1Q3Y452 100 aa-0.47□□□□□ -2.48
CLK1-213ENST00000492793 RABAC1Q9UI14 185 aa-0.47□□□□□ -2.48
CLK1-213ENST00000492793 SETD2Q9BYW2 2564 aaPredicted RBP-0.47□□□□□ -2.48
CLK1-213ENST00000492793 RGPD8O14715 1765 aaPredicted RBP-0.47□□□□□ -2.49
CLK1-213ENST00000492793 RGPD5Q99666 1765 aa-0.47□□□□□ -2.49
CLK1-213ENST00000492793 USP32Q8NFA0 1604 aa-0.48□□□□□ -2.49
CLK1-213ENST00000492793 SPRR2EP22531 72 aa-0.48□□□□□ -2.49
CLK1-213ENST00000492793 ABCA13Q86UQ4 5058 aa-0.48□□□□□ -2.49
CLK1-213ENST00000492793 PKD1P98161 4303 aa-0.48□□□□□ -2.49
CLK1-213ENST00000492793 RYR2Q92736 4967 aa-0.48□□□□□ -2.49
CLK1-213ENST00000492793 ABCC3O15438 1527 aa-0.48□□□□□ -2.49
CLK1-213ENST00000492793 TMEM131LA2VDJ0 1609 aa-0.49□□□□□ -2.49
CLK1-213ENST00000492793 SUPT6HQ7KZ85 1726 aaKnown RBP-0.49□□□□□ -2.49
CLK1-213ENST00000492793 DOPEY1Q5JWR5 2465 aa-0.49□□□□□ -2.49
CLK1-213ENST00000492793 H0YGG7 62 aa-0.49□□□□□ -2.49
CLK1-213ENST00000492793 ACYP1P07311 99 aa-0.49□□□□□ -2.49
CLK1-213ENST00000492793 LAMA5O15230 3695 aa-0.49□□□□□ -2.49
CLK1-213ENST00000492793 SONP18583 2426 aaKnown RBP-0.5□□□□□ -2.49
CLK1-213ENST00000492793 TRANK1O15050 2925 aa-0.51□□□□□ -2.49
CLK1-213ENST00000492793 NDUFB1O75438 58 aa-0.51□□□□□ -2.49
CLK1-213ENST00000492793 AKAP13Q12802 2813 aa-0.51□□□□□ -2.49
CLK1-213ENST00000492793 NCOA2Q15596 1464 aa-0.51□□□□□ -2.49
CLK1-213ENST00000492793 STARD9Q9P2P6 4700 aa-0.51□□□□□ -2.49
CLK1-213ENST00000492793 SPTBN4Q9H254 2564 aa-0.51□□□□□ -2.49
CLK1-213ENST00000492793 POLR1AO95602 1720 aaPredicted RBP-0.52□□□□□ -2.49
CLK1-213ENST00000492793 C4AP0C0L4 1744 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 C4BP0C0L5 1744 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 ZNF831Q5JPB2 1677 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.52□□□□□ -2.49
CLK1-213ENST00000492793 NF1P21359 2839 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 TGP01266 2768 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 HIVEP1P15822 2718 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 LTN1O94822 1766 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 DOT1LQ8TEK3 1739 aa-0.52□□□□□ -2.49
CLK1-213ENST00000492793 KIF14Q15058 1648 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.53□□□□□ -2.49
CLK1-213ENST00000492793 DNAH9Q9NYC9 4486 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 BIRC6Q9NR09 4857 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 HECTD1Q9ULT8 2610 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 KANTRA0A1W2PQU2 76 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 C3orf79P0CE67 100 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 GNG2P59768 71 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 KRTAP19-8Q3LI54 63 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 PRO3102Q9H379 93 aa-0.53□□□□□ -2.49
CLK1-213ENST00000492793 TNRC18O15417 2968 aaPredicted RBP-0.53□□□□□ -2.49
CLK1-213ENST00000492793 PPLO60437 1756 aa-0.54□□□□□ -2.5
CLK1-213ENST00000492793 LINC00158P58513 81 aa-0.54□□□□□ -2.5
CLK1-213ENST00000492793 SPG11Q96JI7 2443 aa-0.54□□□□□ -2.5
CLK1-213ENST00000492793 URB2Q14146 1524 aaKnown RBP-0.54□□□□□ -2.5
CLK1-213ENST00000492793 PRRC2CQ9Y520 2896 aaKnown RBP-0.55□□□□□ -2.5
CLK1-213ENST00000492793 UACAQ9BZF9 1416 aa-0.55□□□□□ -2.5
CLK1-213ENST00000492793 FAT3Q8TDW7 4589 aa-0.55□□□□□ -2.5
CLK1-213ENST00000492793 TIAM2Q8IVF5 1701 aa-0.55□□□□□ -2.5
CLK1-213ENST00000492793 UMAD1C9J7I0 102 aa-0.55□□□□□ -2.5
CLK1-213ENST00000492793 IFI6P09912 130 aa-0.55□□□□□ -2.5
CLK1-213ENST00000492793 NWD1Q149M9 1564 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms