RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-208ENST00000490993 CNBPP62633 177 aaKnown RBP4.8□□□□□ -1.64
NPHP3-208ENST00000490993 PRLHP81277 87 aa4.8□□□□□ -1.64
NPHP3-208ENST00000490993 UTP20O75691 2785 aaKnown RBP4.8□□□□□ -1.64
NPHP3-208ENST00000490993 ZZEF1O43149 2961 aa4.79□□□□□ -1.64
NPHP3-208ENST00000490993 A0A096LNI7 61 aa4.79□□□□□ -1.64
NPHP3-208ENST00000490993 COL12A1Q99715 3063 aa4.79□□□□□ -1.64
NPHP3-208ENST00000490993 NDUFS5O43920 106 aa4.79□□□□□ -1.64
NPHP3-208ENST00000490993 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
NPHP3-208ENST00000490993 FAM168BA1KXE4 195 aa4.79□□□□□ -1.64
NPHP3-208ENST00000490993 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
NPHP3-208ENST00000490993 Q8NBF4 154 aa4.78□□□□□ -1.64
NPHP3-208ENST00000490993 KALRNO60229 2985 aa4.78□□□□□ -1.64
NPHP3-208ENST00000490993 TRBV7-4A0A0J9YYF1 115 aa4.78□□□□□ -1.64
NPHP3-208ENST00000490993 C4orf48Q5BLP8 95 aa4.78□□□□□ -1.64
NPHP3-208ENST00000490993 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
NPHP3-208ENST00000490993 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
NPHP3-208ENST00000490993 IGLV9-49A0A0B4J1Y8 123 aa4.77□□□□□ -1.65
NPHP3-208ENST00000490993 A6NED7 52 aa4.77□□□□□ -1.65
NPHP3-208ENST00000490993 PHF5AQ7RTV0 110 aaKnown RBP4.77□□□□□ -1.65
NPHP3-208ENST00000490993 CRYGAP11844 174 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 C9orf163Q8N9P6 203 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 A0A087WSZ3 146 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 EPM2AB3EWF7 344 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 K7ERS5 55 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 RTL8CO15255 209 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 CASC10Q5T4H9 136 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 CHD6Q8TD26 2715 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 ST20-AS1Q8NBB2 130 aa4.76□□□□□ -1.65
NPHP3-208ENST00000490993 APCP25054 2843 aa4.75□□□□□ -1.65
NPHP3-208ENST00000490993 LINC00476Q8WZB0 136 aa4.75□□□□□ -1.65
NPHP3-208ENST00000490993 ATRQ13535 2644 aa4.75□□□□□ -1.65
NPHP3-208ENST00000490993 CHKB-CPT1BH3BT56 60 aa4.75□□□□□ -1.65
NPHP3-208ENST00000490993 Q8N377 158 aa4.75□□□□□ -1.65
NPHP3-208ENST00000490993 CFAP47Q6ZTR5 3102 aa4.74□□□□□ -1.65
NPHP3-208ENST00000490993 TACC2O95359 2948 aa4.74□□□□□ -1.65
NPHP3-208ENST00000490993 ZFHX4Q86UP3 3567 aa4.74□□□□□ -1.65
NPHP3-208ENST00000490993 WFDC13Q8IUB5 93 aa4.74□□□□□ -1.65
NPHP3-208ENST00000490993 SNURFQ9Y675 71 aa4.74□□□□□ -1.65
NPHP3-208ENST00000490993 HCG22E2RYF7 251 aa4.73□□□□□ -1.65
NPHP3-208ENST00000490993 CHTF8P0CG12 524 aa4.73□□□□□ -1.65
NPHP3-208ENST00000490993 Q8NDZ9 215 aa4.73□□□□□ -1.65
NPHP3-208ENST00000490993 WWC2-AS2Q96NR7 200 aa4.73□□□□□ -1.65
NPHP3-208ENST00000490993 FAM30AQ9NZY2 134 aa4.73□□□□□ -1.65
NPHP3-208ENST00000490993 FLNBO75369 2602 aaKnown RBP4.72□□□□□ -1.65
NPHP3-208ENST00000490993 MAP1AP78559 2803 aaPredicted RBP4.72□□□□□ -1.65
NPHP3-208ENST00000490993 SEC61GP60059 68 aa4.72□□□□□ -1.65
NPHP3-208ENST00000490993 SETXQ7Z333 2677 aaKnown RBP4.72□□□□□ -1.65
NPHP3-208ENST00000490993 A0A087WTM6 91 aa4.72□□□□□ -1.65
NPHP3-208ENST00000490993 IGLV5-48A0A075B6I7 105 aa4.72□□□□□ -1.65
NPHP3-208ENST00000490993 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
NPHP3-208ENST00000490993 HRCT1Q6UXD1 115 aa4.71□□□□□ -1.65
NPHP3-208ENST00000490993 CASC2Q6XLA1 102 aa4.71□□□□□ -1.66
NPHP3-208ENST00000490993 TMEM254Q8TBM7 123 aa4.71□□□□□ -1.66
NPHP3-208ENST00000490993 LAMA5O15230 3695 aa4.7□□□□□ -1.66
NPHP3-208ENST00000490993 A0A1W2PNN7 141 aa4.7□□□□□ -1.66
NPHP3-208ENST00000490993 H3BS24 57 aa4.7□□□□□ -1.66
NPHP3-208ENST00000490993 SPRR1AP35321 89 aa4.7□□□□□ -1.66
NPHP3-208ENST00000490993 Q8N9L7 120 aa4.7□□□□□ -1.66
NPHP3-208ENST00000490993 IGKV4-1P06312 121 aa4.7□□□□□ -1.66
NPHP3-208ENST00000490993 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
NPHP3-208ENST00000490993 BSNQ9UPA5 3926 aa4.69□□□□□ -1.66
NPHP3-208ENST00000490993 LRCOL1A6NCL2 159 aa4.69□□□□□ -1.66
NPHP3-208ENST00000490993 ERC2-IT1O76042 136 aa4.69□□□□□ -1.66
NPHP3-208ENST00000490993 RPL37AP61513 92 aaKnown RBP4.69□□□□□ -1.66
NPHP3-208ENST00000490993 ASPMQ8IZT6 3477 aa4.69□□□□□ -1.66
NPHP3-208ENST00000490993 DCHS1Q96JQ0 3298 aa4.68□□□□□ -1.66
NPHP3-208ENST00000490993 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
NPHP3-208ENST00000490993 SMIM29Q86T20 159 aa4.68□□□□□ -1.66
NPHP3-208ENST00000490993 CIRBP-AS1Q8TBR5 109 aa4.67□□□□□ -1.66
NPHP3-208ENST00000490993 DEFB116Q30KQ4 102 aa4.67□□□□□ -1.66
NPHP3-208ENST00000490993 SPINK6Q6UWN8 80 aa4.67□□□□□ -1.66
NPHP3-208ENST00000490993 TEP1Q99973 2627 aaKnown RBP4.67□□□□□ -1.66
NPHP3-208ENST00000490993 KMT2BQ9UMN6 2715 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-208ENST00000490993 FBN2P35556 2912 aa4.66□□□□□ -1.66
NPHP3-208ENST00000490993 RELNP78509 3460 aa4.66□□□□□ -1.66
NPHP3-208ENST00000490993 RPS28P62857 69 aaKnown RBP4.66□□□□□ -1.66
NPHP3-208ENST00000490993 MOBPQ13875 183 aa4.66□□□□□ -1.66
NPHP3-208ENST00000490993 A0A1W2PNM2 257 aa4.65□□□□□ -1.66
NPHP3-208ENST00000490993 IGHV6-1A0A0B4J1U7 121 aa4.65□□□□□ -1.67
NPHP3-208ENST00000490993 H3BPC8 53 aa4.65□□□□□ -1.67
NPHP3-208ENST00000490993 ZNF861PO60384 105 aa4.65□□□□□ -1.67
NPHP3-208ENST00000490993 LIMD2Q9BT23 127 aa4.65□□□□□ -1.67
NPHP3-208ENST00000490993 TP53AIP1Q9HCN2 124 aa4.65□□□□□ -1.67
NPHP3-208ENST00000490993 ZANQ9Y493 2812 aa4.65□□□□□ -1.67
NPHP3-208ENST00000490993 DCHS2Q6V1P9 2916 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 SMIM26A0A096LP01 95 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 LINC00208Q96KT6 92 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 hDV103S1A0JD37 113 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 A8MWP4 228 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 SPRR4Q96PI1 79 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 ITPR2Q14571 2701 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 H0Y9P7 68 aa4.64□□□□□ -1.67
NPHP3-208ENST00000490993 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
NPHP3-208ENST00000490993 MAST4O15021 2626 aa4.63□□□□□ -1.67
NPHP3-208ENST00000490993 K7EQZ3 153 aa4.62□□□□□ -1.67
NPHP3-208ENST00000490993 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
NPHP3-208ENST00000490993 SPACA4Q8TDM5 124 aa4.62□□□□□ -1.67
NPHP3-208ENST00000490993 GCN1Q92616 2671 aaKnown RBP4.62□□□□□ -1.67
NPHP3-208ENST00000490993 PRR15LQ9BU68 103 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms