RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MAGI3Q5TCQ9 1506 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 ATP10BO94823 1461 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 ACYP1P07311 99 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 IFI6P09912 130 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 DEFB130BP0DP73 79 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 DEFB130AP0DP74 79 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 COX7BP24311 80 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 MRPL54Q6P161 138 aaKnown RBP-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 MYOZ3Q8TDC0 251 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 BTAF1O14981 1849 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 LRRC37AA6NMS7 1700 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 GRIN2AQ12879 1464 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 C1orf167Q5SNV9 1468 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 VPS13AQ96RL7 3174 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 EDC4Q6P2E9 1401 aaKnown RBP-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 A0A1B0GWA3 101 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 M0QY20 66 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 IGLC1P0CG04 106 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 IAPPP10997 89 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 GNGT1P63211 74 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 C6orf201Q7Z4U5 140 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 NXT2Q9NPJ8 142 aaKnown RBP-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 SERP1Q9Y6X1 66 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 C4AP0C0L4 1744 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 C4BP0C0L5 1744 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 XRN1Q8IZH2 1706 aaKnown RBP-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 DIP2CQ9Y2E4 1556 aa-1.3□□□□□ -2.62
CCDC93-209ENST00000488908 BRCA2P51587 3418 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 ZNF831Q5JPB2 1677 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 A0A0G2JND7 137 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 H3BUA1 57 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 ARMS2P0C7Q2 107 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 RPS25P62851 125 aaKnown RBP-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 LCN9Q8WX39 176 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 AP4S1Q9Y587 144 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 SHROOM2Q13796 1616 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 ANKRD36A6QL64 1941 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 MAST1Q9Y2H9 1570 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 PLEKHH2Q8IVE3 1493 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 RGPD2P0DJD1 1756 aa-1.31□□□□□ -2.62
CCDC93-209ENST00000488908 MYOM1P52179 1685 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 TMEM131LA2VDJ0 1609 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 SMARCA2P51531 1590 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 SAA2P0DJI9 122 aaPredicted RBP-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 TSTD1Q8NFU3 115 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 LZICQ8WZA0 190 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 PDCD10Q9BUL8 212 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 ARL2-SNX15V9GYD0 113 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 ANKRD36CQ5JPF3 1778 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 CFTRP13569 1480 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 TOGARAM1Q9Y4F4 1720 aa-1.32□□□□□ -2.62
CCDC93-209ENST00000488908 C20orf202A1L168 122 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 H3BQF6 201 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 PSMG4Q5JS54 123 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 BVES-AS1Q5T3Y7 98 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 SFTA2Q6UW10 78 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 TSLPQ969D9 159 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 PPP3R2Q96LZ3 170 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 UQCR10Q9UDW1 63 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 POLR1AO95602 1720 aaPredicted RBP-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 A2ML1A8K2U0 1454 aa-1.33□□□□□ -2.62
CCDC93-209ENST00000488908 DNMBPQ6XZF7 1577 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 KIAA1551Q9HCM1 1747 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 CRYBG1Q9Y4K1 1723 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 MLH3Q9UHC1 1453 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 LYNX1G3V0Z9 82 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 NDUFC1O43677 76 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 WT1-ASQ06250 92 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 PYDC1Q8WXC3 89 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 RERGLQ9H628 205 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 SCN11AQ9UI33 1791 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 TCHHQ07283 1943 aa-1.34□□□□□ -2.62
CCDC93-209ENST00000488908 LY75O60449 1722 aa-1.35□□□□□ -2.62
CCDC93-209ENST00000488908 PREX1Q8TCU6 1659 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 DEPDC5O75140 1603 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 USP32Q8NFA0 1604 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 H0Y9P7 68 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 CHKB-CPT1BH3BT56 60 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 SMIM21Q3B7S5 101 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 LSM10Q969L4 123 aaKnown RBP-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 VAMP8Q9BV40 100 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 SPANXDQ9BXN6 97 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 RGPD8O14715 1765 aaPredicted RBP-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 RGPD5Q99666 1765 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 TET3O43151 1660 aa-1.35□□□□□ -2.63
CCDC93-209ENST00000488908 TEX14Q8IWB6 1497 aa-1.36□□□□□ -2.63
CCDC93-209ENST00000488908 LEPROTL1O95214 131 aa-1.36□□□□□ -2.63
CCDC93-209ENST00000488908 MRPS10P82664 201 aaKnown RBP-1.36□□□□□ -2.63
CCDC93-209ENST00000488908 PDCD11Q14690 1871 aaKnown RBP-1.36□□□□□ -2.63
CCDC93-209ENST00000488908 PFDN5Q99471 154 aa-1.36□□□□□ -2.63
CCDC93-209ENST00000488908 PLIN4Q96Q06 1357 aa-1.36□□□□□ -2.63
CCDC93-209ENST00000488908 ERVK-7P63135 1459 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 LRRC9Q6ZRR7 1453 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 PKD1L3Q7Z443 1732 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 CPSF1Q10570 1443 aaKnown RBP-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 TRAPPC2P0DI81 140 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 TRAPPC2BP0DI82 140 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 DEFB107AQ8IZN7 70 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.37□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms