RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 USH2AO75445 5202 aa3.47□□□□□ -1.85
PTCH1-211ENST00000488809 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
PTCH1-211ENST00000488809 H7C2G1 150 aa3.46□□□□□ -1.86
PTCH1-211ENST00000488809 SPRR1BP22528 89 aa3.46□□□□□ -1.86
PTCH1-211ENST00000488809 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
PTCH1-211ENST00000488809 C18orf32Q8TCD1 76 aa3.46□□□□□ -1.86
PTCH1-211ENST00000488809 PRO1933Q9H354 126 aa3.46□□□□□ -1.86
PTCH1-211ENST00000488809 DHRS4-AS1Q9P1J3 65 aa3.46□□□□□ -1.86
PTCH1-211ENST00000488809 Q5XG85 94 aa3.45□□□□□ -1.86
PTCH1-211ENST00000488809 Q6Q795 121 aa3.45□□□□□ -1.86
PTCH1-211ENST00000488809 IFI27L1Q96BM0 104 aa3.45□□□□□ -1.86
PTCH1-211ENST00000488809 TRAPPC1Q9Y5R8 145 aa3.45□□□□□ -1.86
PTCH1-211ENST00000488809 UQCC3Q6UW78 93 aa3.44□□□□□ -1.86
PTCH1-211ENST00000488809 URB1-AS1Q96HZ7 61 aa3.44□□□□□ -1.86
PTCH1-211ENST00000488809 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
PTCH1-211ENST00000488809 LEPROTO15243 131 aa3.43□□□□□ -1.86
PTCH1-211ENST00000488809 NMUP48645 174 aa3.43□□□□□ -1.86
PTCH1-211ENST00000488809 AKR1D1P51857 326 aa3.43□□□□□ -1.86
PTCH1-211ENST00000488809 HERVK_113P61574 105 aa3.43□□□□□ -1.86
PTCH1-211ENST00000488809 TAL2Q16559 108 aa3.43□□□□□ -1.86
PTCH1-211ENST00000488809 TMEM218A2RU14 115 aa3.42□□□□□ -1.86
PTCH1-211ENST00000488809 J3QQQ9 107 aa3.42□□□□□ -1.86
PTCH1-211ENST00000488809 TCL1BO95988 128 aa3.42□□□□□ -1.86
PTCH1-211ENST00000488809 LGALS3P17931 250 aaKnown RBP3.42□□□□□ -1.86
PTCH1-211ENST00000488809 RHEBQ15382 184 aa3.42□□□□□ -1.86
PTCH1-211ENST00000488809 Q1RN00 199 aa3.42□□□□□ -1.86
PTCH1-211ENST00000488809 C1orf195Q5TG92 126 aa3.42□□□□□ -1.86
PTCH1-211ENST00000488809 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
PTCH1-211ENST00000488809 CHCHD1Q96BP2 118 aaKnown RBP3.42□□□□□ -1.86
PTCH1-211ENST00000488809 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
PTCH1-211ENST00000488809 TEX49A0A1B0GTD5 131 aa3.41□□□□□ -1.86
PTCH1-211ENST00000488809 H0Y8G0 127 aa3.41□□□□□ -1.86
PTCH1-211ENST00000488809 PLNP26678 52 aa3.41□□□□□ -1.86
PTCH1-211ENST00000488809 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
PTCH1-211ENST00000488809 SMIM29Q86T20 159 aa3.41□□□□□ -1.86
PTCH1-211ENST00000488809 OR13C6PQ8NH95 151 aa3.41□□□□□ -1.86
PTCH1-211ENST00000488809 RPS10P5Q9NQ39 176 aa3.41□□□□□ -1.86
PTCH1-211ENST00000488809 C20orf202A1L168 122 aa3.4□□□□□ -1.87
PTCH1-211ENST00000488809 COX7BP24311 80 aa3.4□□□□□ -1.87
PTCH1-211ENST00000488809 TSPEAR-AS2P59090 65 aa3.4□□□□□ -1.87
PTCH1-211ENST00000488809 NPC2P61916 151 aa3.4□□□□□ -1.87
PTCH1-211ENST00000488809 DEFB105AQ8NG35 78 aa3.4□□□□□ -1.87
PTCH1-211ENST00000488809 SPANXCQ9NY87 97 aa3.4□□□□□ -1.87
PTCH1-211ENST00000488809 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
PTCH1-211ENST00000488809 HSBP1O75506 76 aa3.39□□□□□ -1.87
PTCH1-211ENST00000488809 ELOF1P60002 83 aaKnown RBP3.39□□□□□ -1.87
PTCH1-211ENST00000488809 C10orf91Q5T1B1 145 aa3.39□□□□□ -1.87
PTCH1-211ENST00000488809 SPANXDQ9BXN6 97 aa3.39□□□□□ -1.87
PTCH1-211ENST00000488809 LINC00846Q9NV44 126 aa3.39□□□□□ -1.87
PTCH1-211ENST00000488809 TRBV20-1A0A075B6N2 111 aa3.38□□□□□ -1.87
PTCH1-211ENST00000488809 SOSTDC1Q6X4U4 206 aa3.38□□□□□ -1.87
PTCH1-211ENST00000488809 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
PTCH1-211ENST00000488809 LINC00518Q8N0U6 118 aa3.38□□□□□ -1.87
PTCH1-211ENST00000488809 A0A0J9YXY3 114 aa3.37□□□□□ -1.87
PTCH1-211ENST00000488809 DPM2O94777 84 aa3.37□□□□□ -1.87
PTCH1-211ENST00000488809 LEPROTL1O95214 131 aa3.37□□□□□ -1.87
PTCH1-211ENST00000488809 IGKCP01834 107 aa3.37□□□□□ -1.87
PTCH1-211ENST00000488809 C6orf99Q4VX62 202 aa3.37□□□□□ -1.87
PTCH1-211ENST00000488809 Q75L30 129 aa3.37□□□□□ -1.87
PTCH1-211ENST00000488809 TRBV7-6A0A0J9YX20 115 aa3.36□□□□□ -1.87
PTCH1-211ENST00000488809 F8WEM9 126 aa3.36□□□□□ -1.87
PTCH1-211ENST00000488809 ADAMTSL4-AS1Q5T5F5 129 aa3.36□□□□□ -1.87
PTCH1-211ENST00000488809 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
PTCH1-211ENST00000488809 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
PTCH1-211ENST00000488809 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
PTCH1-211ENST00000488809 HSPB8Q9UJY1 196 aa3.36□□□□□ -1.87
PTCH1-211ENST00000488809 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
PTCH1-211ENST00000488809 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
PTCH1-211ENST00000488809 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
PTCH1-211ENST00000488809 A4D1N5 150 aa3.34□□□□□ -1.87
PTCH1-211ENST00000488809 E9PLD3 99 aa3.34□□□□□ -1.87
PTCH1-211ENST00000488809 EIF4EBP3O60516 100 aaPredicted RBP3.34□□□□□ -1.87
PTCH1-211ENST00000488809 TIMM17BO60830 172 aa3.34□□□□□ -1.87
PTCH1-211ENST00000488809 COPS9Q8WXC6 57 aa3.34□□□□□ -1.87
PTCH1-211ENST00000488809 OBSCN-AS1Q96MR7 158 aa3.34□□□□□ -1.87
PTCH1-211ENST00000488809 NDUFA5Q16718 116 aa3.33□□□□□ -1.88
PTCH1-211ENST00000488809 A0A0G2JQZ4 141 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 FAM236DA0A1B0GTK5 79 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 SNAPINO95295 136 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 FAM236CP0DP71 79 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 Q6JHZ5 121 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 CLEC2BQ92478 149 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 PMCHL2Q9BQD1 86 aa3.32□□□□□ -1.88
PTCH1-211ENST00000488809 TRBV7-7A0A0K0K1E9 115 aa3.31□□□□□ -1.88
PTCH1-211ENST00000488809 APOC3P02656 99 aa3.31□□□□□ -1.88
PTCH1-211ENST00000488809 MT2AP02795 61 aa3.31□□□□□ -1.88
PTCH1-211ENST00000488809 FABP4P15090 132 aa3.31□□□□□ -1.88
PTCH1-211ENST00000488809 SVBPQ8N300 66 aa3.31□□□□□ -1.88
PTCH1-211ENST00000488809 Q96NJ1 140 aa3.31□□□□□ -1.88
PTCH1-211ENST00000488809 LITAFQ99732 161 aa3.31□□□□□ -1.88
PTCH1-211ENST00000488809 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
PTCH1-211ENST00000488809 A6NDN8 102 aa3.3□□□□□ -1.88
PTCH1-211ENST00000488809 LST1O00453 97 aa3.3□□□□□ -1.88
PTCH1-211ENST00000488809 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
PTCH1-211ENST00000488809 IGFL1Q6UW32 110 aa3.3□□□□□ -1.88
PTCH1-211ENST00000488809 LCE2BO14633 110 aa3.29□□□□□ -1.88
PTCH1-211ENST00000488809 SERF1AO75920 110 aa3.29□□□□□ -1.88
PTCH1-211ENST00000488809 SLC7A5P1Q8MH63 180 aa3.29□□□□□ -1.88
PTCH1-211ENST00000488809 C20orf166-AS1Q96NR2 134 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms