RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 MUSTN1Q8IVN3 82 aa7.31□□□□□ -1.24
SDC3-204ENST00000487984 LINC00308Q8TCZ7 52 aa7.31□□□□□ -1.24
SDC3-204ENST00000487984 IGLV5-37A0A075B6J1 123 aa7.3□□□□□ -1.24
SDC3-204ENST00000487984 A6NDN8 102 aa7.3□□□□□ -1.24
SDC3-204ENST00000487984 HINT1P49773 126 aaPredicted RBP7.3□□□□□ -1.24
SDC3-204ENST00000487984 DAND5Q8N907 189 aa7.3□□□□□ -1.24
SDC3-204ENST00000487984 BVES-AS1Q5T3Y7 98 aa7.29□□□□□ -1.24
SDC3-204ENST00000487984 NKAPP1Q8N9T2 125 aa7.29□□□□□ -1.24
SDC3-204ENST00000487984 A0A087X002 238 aa7.28□□□□□ -1.24
SDC3-204ENST00000487984 LOC107984156A0A0G2JMH3 177 aa7.28□□□□□ -1.24
SDC3-204ENST00000487984 NPC2P61916 151 aa7.28□□□□□ -1.24
SDC3-204ENST00000487984 BATFQ16520 125 aa7.28□□□□□ -1.24
SDC3-204ENST00000487984 ARL17AQ8IVW1 177 aa7.28□□□□□ -1.24
SDC3-204ENST00000487984 SND1-IT1Q9HBX3 110 aa7.28□□□□□ -1.24
SDC3-204ENST00000487984 KRTAP13-1Q8IUC0 172 aa7.27□□□□□ -1.25
SDC3-204ENST00000487984 IGKV2-28A0A075B6P5 120 aa7.26□□□□□ -1.25
SDC3-204ENST00000487984 A4D1N5 150 aa7.26□□□□□ -1.25
SDC3-204ENST00000487984 NDUFC2O95298 119 aa7.26□□□□□ -1.25
SDC3-204ENST00000487984 IGKV2D-28P01615 120 aa7.26□□□□□ -1.25
SDC3-204ENST00000487984 FXYD2P54710 66 aa7.26□□□□□ -1.25
SDC3-204ENST00000487984 PRR4Q16378 134 aa7.26□□□□□ -1.25
SDC3-204ENST00000487984 CRYGAP11844 174 aa7.25□□□□□ -1.25
SDC3-204ENST00000487984 UBE2AP49459 152 aa7.25□□□□□ -1.25
SDC3-204ENST00000487984 RAB37Q96AX2 223 aa7.25□□□□□ -1.25
SDC3-204ENST00000487984 NHP2Q9NX24 153 aaKnown RBP7.25□□□□□ -1.25
SDC3-204ENST00000487984 ANAPC11Q9NYG5 84 aa7.25□□□□□ -1.25
SDC3-204ENST00000487984 TSPAN13O95857 204 aa7.24□□□□□ -1.25
SDC3-204ENST00000487984 VPREB1P12018 145 aa7.24□□□□□ -1.25
SDC3-204ENST00000487984 COL5A1-AS1Q5SY13 56 aa7.24□□□□□ -1.25
SDC3-204ENST00000487984 SOSTDC1Q6X4U4 206 aa7.24□□□□□ -1.25
SDC3-204ENST00000487984 SNHG12Q9BXW3 62 aa7.24□□□□□ -1.25
SDC3-204ENST00000487984 TRAV13-2A0A0B4J235 113 aa7.23□□□□□ -1.25
SDC3-204ENST00000487984 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
SDC3-204ENST00000487984 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
SDC3-204ENST00000487984 A0A1B0GWB2 263 aa7.22□□□□□ -1.25
SDC3-204ENST00000487984 KRTAP13-2Q52LG2 175 aa7.22□□□□□ -1.25
SDC3-204ENST00000487984 Q8NDZ9 215 aa7.22□□□□□ -1.25
SDC3-204ENST00000487984 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.26
SDC3-204ENST00000487984 CFC1BP0CG36 223 aa7.21□□□□□ -1.26
SDC3-204ENST00000487984 CFC1P0CG37 223 aa7.21□□□□□ -1.26
SDC3-204ENST00000487984 PRLHP81277 87 aa7.21□□□□□ -1.26
SDC3-204ENST00000487984 PRO1854Q9UHT4 67 aa7.21□□□□□ -1.26
SDC3-204ENST00000487984 CBY1Q9Y3M2 126 aa7.21□□□□□ -1.26
SDC3-204ENST00000487984 EIF4EBP3O60516 100 aaPredicted RBP7.2□□□□□ -1.26
SDC3-204ENST00000487984 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
SDC3-204ENST00000487984 TMEM126AQ9H061 195 aa7.2□□□□□ -1.26
SDC3-204ENST00000487984 MUC2Q02817 5179 aa7.2□□□□□ -1.26
SDC3-204ENST00000487984 M0R378 163 aa7.19□□□□□ -1.26
SDC3-204ENST00000487984 FAM229BQ4G0N7 80 aa7.19□□□□□ -1.26
SDC3-204ENST00000487984 S100A7L2Q5SY68 101 aa7.19□□□□□ -1.26
SDC3-204ENST00000487984 OR13C6PQ8NH95 151 aa7.19□□□□□ -1.26
SDC3-204ENST00000487984 Q1RN00 199 aa7.18□□□□□ -1.26
SDC3-204ENST00000487984 K7ERJ3 54 aa7.16□□□□□ -1.26
SDC3-204ENST00000487984 NCR3O14931 201 aa7.16□□□□□ -1.26
SDC3-204ENST00000487984 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
SDC3-204ENST00000487984 LYRM7Q5U5X0 104 aa7.15□□□□□ -1.26
SDC3-204ENST00000487984 LINC00337Q8N6G1 96 aa7.15□□□□□ -1.26
SDC3-204ENST00000487984 C9orf118A6NHY6 69 aa7.14□□□□□ -1.27
SDC3-204ENST00000487984 H7C2G1 150 aa7.14□□□□□ -1.27
SDC3-204ENST00000487984 COX6CP09669 75 aa7.14□□□□□ -1.27
SDC3-204ENST00000487984 PSMB2P49721 201 aa7.14□□□□□ -1.27
SDC3-204ENST00000487984 TAX1BP3O14907 124 aa7.13□□□□□ -1.27
SDC3-204ENST00000487984 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
SDC3-204ENST00000487984 HIGD2AQ9BW72 106 aa7.13□□□□□ -1.27
SDC3-204ENST00000487984 IGLV6-57P01721 117 aa7.12□□□□□ -1.27
SDC3-204ENST00000487984 VAMP3Q15836 100 aa7.12□□□□□ -1.27
SDC3-204ENST00000487984 C3orf22Q8N5N4 141 aa7.12□□□□□ -1.27
SDC3-204ENST00000487984 TRBV10-3A0A0K0K1G6 114 aa7.11□□□□□ -1.27
SDC3-204ENST00000487984 H3BUT2 72 aa7.11□□□□□ -1.27
SDC3-204ENST00000487984 SCGB1C2P0DMR2 95 aa7.11□□□□□ -1.27
SDC3-204ENST00000487984 TRAV23DV6A0A075B6W5 121 aa7.1□□□□□ -1.27
SDC3-204ENST00000487984 FABP2P12104 132 aa7.1□□□□□ -1.27
SDC3-204ENST00000487984 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
SDC3-204ENST00000487984 PRYO14603 147 aa7.09□□□□□ -1.27
SDC3-204ENST00000487984 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
SDC3-204ENST00000487984 A0A1W2PPM0 123 aa7.08□□□□□ -1.28
SDC3-204ENST00000487984 H0YGX0 51 aa7.08□□□□□ -1.28
SDC3-204ENST00000487984 SNCGO76070 127 aa7.08□□□□□ -1.28
SDC3-204ENST00000487984 SPRR1AP35321 89 aa7.08□□□□□ -1.28
SDC3-204ENST00000487984 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
SDC3-204ENST00000487984 TRBV7-6A0A0J9YX20 115 aa7.07□□□□□ -1.28
SDC3-204ENST00000487984 TRIAP1O43715 76 aa7.07□□□□□ -1.28
SDC3-204ENST00000487984 ZNF73O43830 326 aaPredicted RBP7.07□□□□□ -1.28
SDC3-204ENST00000487984 ZNF706Q9Y5V0 76 aaPredicted RBP7.07□□□□□ -1.28
SDC3-204ENST00000487984 TRBV20-1A0A075B6N2 111 aa7.06□□□□□ -1.28
SDC3-204ENST00000487984 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
SDC3-204ENST00000487984 NAA38Q9BRA0 125 aaKnown RBP7.06□□□□□ -1.28
SDC3-204ENST00000487984 IGLV7-46A0A075B6I9 117 aa7.05□□□□□ -1.28
SDC3-204ENST00000487984 ETDCA0A1B0GVM5 59 aa7.05□□□□□ -1.28
SDC3-204ENST00000487984 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
SDC3-204ENST00000487984 C6orf99Q4VX62 202 aa7.05□□□□□ -1.28
SDC3-204ENST00000487984 COX7BP24311 80 aa7.04□□□□□ -1.28
SDC3-204ENST00000487984 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
SDC3-204ENST00000487984 SMCR5Q8TEV8 140 aa7.04□□□□□ -1.28
SDC3-204ENST00000487984 A0A0U1RQV1 116 aa7.03□□□□□ -1.28
SDC3-204ENST00000487984 SLC25A20O43772 301 aa7.03□□□□□ -1.28
SDC3-204ENST00000487984 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
SDC3-204ENST00000487984 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
SDC3-204ENST00000487984 CDIP1Q9H305 208 aa7.03□□□□□ -1.28
SDC3-204ENST00000487984 SPCS1Q9Y6A9 102 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms