RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 NDUFA3O95167 84 aa-0.83□□□□□ -2.54
GCFC2-209ENST00000486016 TROQ12816 1431 aaPredicted RBP-0.83□□□□□ -2.54
GCFC2-209ENST00000486016 TRANK1O15050 2925 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 PKD1P98161 4303 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 ATP7BP35670 1465 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 PDE4DIPQ5VU43 2346 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 A0A1B0GUT8 65 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 IQCF6A8MYZ5 107 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 GYPAP02724 150 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 SMIM11AP58511 58 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 RPL38P63173 70 aaKnown RBP-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 PLGLAQ15195 96 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 GAFA1Q96PS6 74 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 C20orf78Q9BR46 151 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 SNHG12Q9BXW3 62 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 SPG11Q96JI7 2443 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 RGPD1P0DJD0 1748 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 ANKRD26Q9UPS8 1709 aa-0.84□□□□□ -2.54
GCFC2-209ENST00000486016 RGPD8O14715 1765 aaPredicted RBP-0.85□□□□□ -2.55
GCFC2-209ENST00000486016 RGPD5Q99666 1765 aa-0.85□□□□□ -2.55
GCFC2-209ENST00000486016 PEA15Q15121 130 aa-0.85□□□□□ -2.55
GCFC2-209ENST00000486016 VPS8Q8N3P4 1428 aa-0.85□□□□□ -2.55
GCFC2-209ENST00000486016 SPRR2FQ96RM1 72 aa-0.85□□□□□ -2.55
GCFC2-209ENST00000486016 TNRC18O15417 2968 aaPredicted RBP-0.86□□□□□ -2.55
GCFC2-209ENST00000486016 NEXMIFQ5QGS0 1516 aa-0.86□□□□□ -2.55
GCFC2-209ENST00000486016 EPG5Q9HCE0 2579 aa-0.86□□□□□ -2.55
GCFC2-209ENST00000486016 MYO3AQ8NEV4 1616 aa-0.86□□□□□ -2.55
GCFC2-209ENST00000486016 C4AP0C0L4 1744 aa-0.86□□□□□ -2.55
GCFC2-209ENST00000486016 C4BP0C0L5 1744 aa-0.86□□□□□ -2.55
GCFC2-209ENST00000486016 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.87□□□□□ -2.55
GCFC2-209ENST00000486016 PRRC2CQ9Y520 2896 aaKnown RBP-0.87□□□□□ -2.55
GCFC2-209ENST00000486016 HECTD1Q9ULT8 2610 aa-0.87□□□□□ -2.55
GCFC2-209ENST00000486016 PKIAP61925 76 aa-0.87□□□□□ -2.55
GCFC2-209ENST00000486016 CEP162Q5TB80 1403 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 FAT1Q14517 4588 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 UBR1Q8IWV7 1749 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 CYB5AP00167 134 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 MT1AP04731 61 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 S100A8P05109 93 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 MT4P47944 62 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 AKAP12Q02952 1782 aa-0.88□□□□□ -2.55
GCFC2-209ENST00000486016 TRAV21A0A0B4J279 112 aa-0.89□□□□□ -2.55
GCFC2-209ENST00000486016 H3BNG1 76 aa-0.89□□□□□ -2.55
GCFC2-209ENST00000486016 SUPT6HQ7KZ85 1726 aaKnown RBP-0.89□□□□□ -2.55
GCFC2-209ENST00000486016 WFDC9Q8NEX5 89 aa-0.91□□□□□ -2.56
GCFC2-209ENST00000486016 TACC2O95359 2948 aa-0.91□□□□□ -2.56
GCFC2-209ENST00000486016 DNAH6Q9C0G6 4158 aa-0.91□□□□□ -2.56
GCFC2-209ENST00000486016 TIAM2Q8IVF5 1701 aa-0.92□□□□□ -2.56
GCFC2-209ENST00000486016 HIVEP1P15822 2718 aa-0.92□□□□□ -2.56
GCFC2-209ENST00000486016 STARD9Q9P2P6 4700 aa-0.92□□□□□ -2.56
GCFC2-209ENST00000486016 MYMXA0A1B0GTQ4 84 aa-0.92□□□□□ -2.56
GCFC2-209ENST00000486016 POLR1AO95602 1720 aaPredicted RBP-0.92□□□□□ -2.56
GCFC2-209ENST00000486016 USP32Q8NFA0 1604 aa-0.93□□□□□ -2.56
GCFC2-209ENST00000486016 FAT3Q8TDW7 4589 aa-0.94□□□□□ -2.56
GCFC2-209ENST00000486016 HTTP42858 3142 aa-0.94□□□□□ -2.56
GCFC2-209ENST00000486016 FASNP49327 2511 aaKnown RBP-0.94□□□□□ -2.56
GCFC2-209ENST00000486016 C3orf79P0CE67 100 aa-0.94□□□□□ -2.56
GCFC2-209ENST00000486016 PRO3102Q9H379 93 aa-0.94□□□□□ -2.56
GCFC2-209ENST00000486016 RGPD4Q7Z3J3 1758 aa-0.94□□□□□ -2.56
GCFC2-209ENST00000486016 C9orf92A6NGG3 77 aa-0.95□□□□□ -2.56
GCFC2-209ENST00000486016 LINC00158P58513 81 aa-0.95□□□□□ -2.56
GCFC2-209ENST00000486016 PYY3Q5JQD4 70 aa-0.95□□□□□ -2.56
GCFC2-209ENST00000486016 TEP1Q99973 2627 aaKnown RBP-0.95□□□□□ -2.56
GCFC2-209ENST00000486016 DNAH9Q9NYC9 4486 aa-0.95□□□□□ -2.56
GCFC2-209ENST00000486016 PLXNC1O60486 1568 aa-0.96□□□□□ -2.56
GCFC2-209ENST00000486016 NWD1Q149M9 1564 aa-0.96□□□□□ -2.56
GCFC2-209ENST00000486016 RGPD3A6NKT7 1758 aaPredicted RBP-0.96□□□□□ -2.56
GCFC2-209ENST00000486016 USH2AO75445 5202 aa-0.96□□□□□ -2.56
GCFC2-209ENST00000486016 LTN1O94822 1766 aa-0.96□□□□□ -2.56
GCFC2-209ENST00000486016 SCN11AQ9UI33 1791 aa-0.96□□□□□ -2.56
GCFC2-209ENST00000486016 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.96□□□□□ -2.56
GCFC2-209ENST00000486016 TMEM131LA2VDJ0 1609 aa-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 NESP48681 1621 aa-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 DOT1LQ8TEK3 1739 aa-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 ZZEF1O43149 2961 aa-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 CEBPZOSA8MTT3 80 aa-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 SNRPFP62306 86 aaKnown RBP-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 LINC00643Q86TS7 51 aa-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 S100A16Q96FQ6 103 aaKnown RBP-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 Q9H521 79 aa-0.97□□□□□ -2.56
GCFC2-209ENST00000486016 PLIN4Q96Q06 1357 aa-0.97□□□□□ -2.57
GCFC2-209ENST00000486016 DMXL1Q9Y485 3027 aa-0.97□□□□□ -2.57
GCFC2-209ENST00000486016 ANKRD50Q9ULJ7 1429 aa-0.98□□□□□ -2.57
GCFC2-209ENST00000486016 K7EP34 96 aa-0.98□□□□□ -2.57
GCFC2-209ENST00000486016 NDUFB1O75438 58 aa-0.98□□□□□ -2.57
GCFC2-209ENST00000486016 RABAC1Q9UI14 185 aa-0.98□□□□□ -2.57
GCFC2-209ENST00000486016 WIZO95785 1651 aa-0.98□□□□□ -2.57
GCFC2-209ENST00000486016 LYSTQ99698 3801 aa-0.98□□□□□ -2.57
GCFC2-209ENST00000486016 NCOA2Q15596 1464 aa-0.99□□□□□ -2.57
GCFC2-209ENST00000486016 ZNF831Q5JPB2 1677 aa-0.99□□□□□ -2.57
GCFC2-209ENST00000486016 UBR4Q5T4S7 5183 aa-0.99□□□□□ -2.57
GCFC2-209ENST00000486016 CUBNO60494 3623 aa-0.99□□□□□ -2.57
GCFC2-209ENST00000486016 CCNB3Q8WWL7 1395 aa-0.99□□□□□ -2.57
GCFC2-209ENST00000486016 HERC2O95714 4834 aa-1□□□□□ -2.57
GCFC2-209ENST00000486016 V9GYS6 101 aa-1□□□□□ -2.57
GCFC2-209ENST00000486016 NBPF19A0A087WUL8 3843 aa-1□□□□□ -2.57
GCFC2-209ENST00000486016 H0YAA0 97 aa-1.01□□□□□ -2.57
GCFC2-209ENST00000486016 ACYP1P07311 99 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms