RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 SPG11Q96JI7 2443 aa-0.8□□□□□ -2.54
SPC25-204ENST00000479309 ANKRD11Q6UB99 2663 aaPredicted RBP-0.81□□□□□ -2.54
SPC25-204ENST00000479309 ZZEF1O43149 2961 aa-0.81□□□□□ -2.54
SPC25-204ENST00000479309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.81□□□□□ -2.541e-8■■■■■ 27.8
SPC25-204ENST00000479309 USP9YO00507 2555 aaPredicted RBP-0.81□□□□□ -2.54
SPC25-204ENST00000479309 DNAH6Q9C0G6 4158 aa-0.81□□□□□ -2.54
SPC25-204ENST00000479309 RPL38P63173 70 aaKnown RBP-0.81□□□□□ -2.54
SPC25-204ENST00000479309 UBE2D4Q9Y2X8 147 aa-0.81□□□□□ -2.54
SPC25-204ENST00000479309 C4AP0C0L4 1744 aa-0.81□□□□□ -2.54
SPC25-204ENST00000479309 C4BP0C0L5 1744 aa-0.81□□□□□ -2.54
SPC25-204ENST00000479309 UBR3Q6ZT12 1888 aa-0.82□□□□□ -2.54
SPC25-204ENST00000479309 HERC2O95714 4834 aa-0.82□□□□□ -2.54
SPC25-204ENST00000479309 KNL1Q8NG31 2342 aa-0.82□□□□□ -2.54
SPC25-204ENST00000479309 MT1AP04731 61 aa-0.82□□□□□ -2.54
SPC25-204ENST00000479309 COX7BP24311 80 aa-0.82□□□□□ -2.54
SPC25-204ENST00000479309 CNTLNQ9NXG0 1405 aa-0.82□□□□□ -2.54
SPC25-204ENST00000479309 LRRC7Q96NW7 1537 aa-0.83□□□□□ -2.54
SPC25-204ENST00000479309 TIAM2Q8IVF5 1701 aa-0.83□□□□□ -2.54
SPC25-204ENST00000479309 FAUP35544 74 aaKnown RBP-0.83□□□□□ -2.54
SPC25-204ENST00000479309 C14orf144Q96I85 54 aa-0.83□□□□□ -2.54
SPC25-204ENST00000479309 DPY30Q9C005 99 aa-0.83□□□□□ -2.54
SPC25-204ENST00000479309 UBR4Q5T4S7 5183 aa-0.83□□□□□ -2.54
SPC25-204ENST00000479309 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.84□□□□□ -2.54
SPC25-204ENST00000479309 DMXL1Q9Y485 3027 aa-0.84□□□□□ -2.54
SPC25-204ENST00000479309 FAT3Q8TDW7 4589 aa-0.84□□□□□ -2.54
SPC25-204ENST00000479309 LAMA1P25391 3075 aa-0.85□□□□□ -2.54
SPC25-204ENST00000479309 ATP10BO94823 1461 aa-0.85□□□□□ -2.55
SPC25-204ENST00000479309 MYO3AQ8NEV4 1616 aa-0.85□□□□□ -2.55
SPC25-204ENST00000479309 H3BNG1 76 aa-0.85□□□□□ -2.55
SPC25-204ENST00000479309 PEG3Q9GZU2 1588 aa-0.85□□□□□ -2.55
SPC25-204ENST00000479309 FASNP49327 2511 aaKnown RBP-0.85□□□□□ -2.55
SPC25-204ENST00000479309 MYH4Q9Y623 1939 aa-0.85□□□□□ -2.55
SPC25-204ENST00000479309 STARD9Q9P2P6 4700 aa-0.86□□□□□ -2.55
SPC25-204ENST00000479309 SUPT6HQ7KZ85 1726 aaKnown RBP-0.86□□□□□ -2.55
SPC25-204ENST00000479309 A0A1B0GUT8 65 aa-0.86□□□□□ -2.55
SPC25-204ENST00000479309 C9orf92A6NGG3 77 aa-0.86□□□□□ -2.55
SPC25-204ENST00000479309 NDUFA3O95167 84 aa-0.86□□□□□ -2.55
SPC25-204ENST00000479309 ACBD7Q8N6N7 88 aa-0.86□□□□□ -2.55
SPC25-204ENST00000479309 ATP7BP35670 1465 aa-0.86□□□□□ -2.55
SPC25-204ENST00000479309 RGPD1P0DJD0 1748 aa-0.86□□□□□ -2.55
SPC25-204ENST00000479309 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.87□□□□□ -2.55
SPC25-204ENST00000479309 LYSTQ99698 3801 aa-0.87□□□□□ -2.55
SPC25-204ENST00000479309 AKAP9Q99996 3911 aa-0.87□□□□□ -2.55
SPC25-204ENST00000479309 KALRNO60229 2985 aa-0.87□□□□□ -2.55
SPC25-204ENST00000479309 RBP2P50120 134 aa-0.87□□□□□ -2.55
SPC25-204ENST00000479309 MYO18BQ8IUG5 2567 aa-0.87□□□□□ -2.55
SPC25-204ENST00000479309 CUBNO60494 3623 aa-0.87□□□□□ -2.55
SPC25-204ENST00000479309 ANKRD50Q9ULJ7 1429 aa-0.88□□□□□ -2.55
SPC25-204ENST00000479309 PDE4DIPQ5VU43 2346 aa-0.88□□□□□ -2.55
SPC25-204ENST00000479309 ANKRD26Q9UPS8 1709 aa-0.88□□□□□ -2.55
SPC25-204ENST00000479309 ATP6V1G2-DDX39BF2Z307 99 aa-0.88□□□□□ -2.55
SPC25-204ENST00000479309 HMGN2P05204 90 aaKnown RBP-0.88□□□□□ -2.55
SPC25-204ENST00000479309 PLGLAQ15195 96 aa-0.88□□□□□ -2.55
SPC25-204ENST00000479309 GAFA1Q96PS6 74 aa-0.88□□□□□ -2.55
SPC25-204ENST00000479309 POLR1AO95602 1720 aaPredicted RBP-0.89□□□□□ -2.55
SPC25-204ENST00000479309 IQCF6A8MYZ5 107 aa-0.89□□□□□ -2.55
SPC25-204ENST00000479309 CYB5AP00167 134 aa-0.89□□□□□ -2.55
SPC25-204ENST00000479309 SMIM11AP58511 58 aa-0.89□□□□□ -2.55
SPC25-204ENST00000479309 PLXNC1O60486 1568 aa-0.89□□□□□ -2.55
SPC25-204ENST00000479309 GCN1Q92616 2671 aaKnown RBP-0.89□□□□□ -2.55
SPC25-204ENST00000479309 PEA15Q15121 130 aa-0.9□□□□□ -2.55
SPC25-204ENST00000479309 UBR1Q8IWV7 1749 aa-0.9□□□□□ -2.55
SPC25-204ENST00000479309 NESP48681 1621 aa-0.9□□□□□ -2.55
SPC25-204ENST00000479309 GYPAP02724 150 aa-0.91□□□□□ -2.56
SPC25-204ENST00000479309 USP32Q8NFA0 1604 aa-0.91□□□□□ -2.56
SPC25-204ENST00000479309 NEBP20929 6669 aa-0.91□□□□□ -2.56
SPC25-204ENST00000479309 RGPD3A6NKT7 1758 aaPredicted RBP-0.91□□□□□ -2.56
SPC25-204ENST00000479309 RGPD4Q7Z3J3 1758 aa-0.91□□□□□ -2.56
SPC25-204ENST00000479309 CEP162Q5TB80 1403 aa-0.91□□□□□ -2.56
SPC25-204ENST00000479309 WDR87Q6ZQQ6 2873 aa-0.91□□□□□ -2.56
SPC25-204ENST00000479309 NWD1Q149M9 1564 aa-0.91□□□□□ -2.56
SPC25-204ENST00000479309 LTN1O94822 1766 aa-0.92□□□□□ -2.56
SPC25-204ENST00000479309 NCMAPQ5T1S8 102 aa-0.92□□□□□ -2.56
SPC25-204ENST00000479309 PKHD1L1Q86WI1 4243 aa-0.92□□□□□ -2.56
SPC25-204ENST00000479309 AKAP12Q02952 1782 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 EPPK1P58107 5090 aaKnown RBP-0.93□□□□□ -2.56
SPC25-204ENST00000479309 M0R143 59 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 C3orf79P0CE67 100 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 PRO3102Q9H379 93 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 DNAH3Q8TD57 4116 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 DNAH9Q9NYC9 4486 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 ABCC10Q5T3U5 1492 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 SCN11AQ9UI33 1791 aa-0.93□□□□□ -2.56
SPC25-204ENST00000479309 NEXMIFQ5QGS0 1516 aa-0.94□□□□□ -2.56
SPC25-204ENST00000479309 NBEAQ8NFP9 2946 aa-0.94□□□□□ -2.56
SPC25-204ENST00000479309 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.94□□□□□ -2.56
SPC25-204ENST00000479309 VPS8Q8N3P4 1428 aa-0.94□□□□□ -2.56
SPC25-204ENST00000479309 WFDC9Q8NEX5 89 aa-0.94□□□□□ -2.56
SPC25-204ENST00000479309 DSPP15924 2871 aaKnown RBP-0.94□□□□□ -2.56
SPC25-204ENST00000479309 MUC17Q685J3 4493 aa-0.94□□□□□ -2.56
SPC25-204ENST00000479309 DOPEY1Q5JWR5 2465 aa-0.94□□□□□ -2.56
SPC25-204ENST00000479309 WIZO95785 1651 aa-0.94□□□□□ -2.56
SPC25-204ENST00000479309 UTP20O75691 2785 aaKnown RBP-0.95□□□□□ -2.56
SPC25-204ENST00000479309 VPS13DQ5THJ4 4388 aa-0.95□□□□□ -2.56
SPC25-204ENST00000479309 DEPDC5O75140 1603 aa-0.95□□□□□ -2.56
SPC25-204ENST00000479309 TRAV21A0A0B4J279 112 aa-0.95□□□□□ -2.56
SPC25-204ENST00000479309 LINC00158P58513 81 aa-0.95□□□□□ -2.56
SPC25-204ENST00000479309 MAP3K1Q13233 1512 aa-0.95□□□□□ -2.56
SPC25-204ENST00000479309 MTORP42345 2549 aa-0.95□□□□□ -2.56
SPC25-204ENST00000479309 MGAM2Q2M2H8 2515 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms