RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 CDC42SE2Q9NRR3 84 aa6.88□□□□□ -1.31
MRPL40-203ENST00000471259 LPAP08519 4548 aa6.88□□□□□ -1.31
MRPL40-203ENST00000471259 TRBV6-5A0A0K0K1A5 114 aa6.87□□□□□ -1.31
MRPL40-203ENST00000471259 PMVKQ15126 192 aa6.87□□□□□ -1.31
MRPL40-203ENST00000471259 TMEM170BQ5T4T1 132 aa6.87□□□□□ -1.31
MRPL40-203ENST00000471259 RPL39LQ96EH5 51 aaKnown RBP6.87□□□□□ -1.31
MRPL40-203ENST00000471259 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
MRPL40-203ENST00000471259 CFC1P0CG37 223 aa6.86□□□□□ -1.31
MRPL40-203ENST00000471259 C2orf66Q6UXQ4 117 aa6.86□□□□□ -1.31
MRPL40-203ENST00000471259 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
MRPL40-203ENST00000471259 A0A1B0GX51 115 aa6.85□□□□□ -1.31
MRPL40-203ENST00000471259 COX6CP09669 75 aa6.85□□□□□ -1.31
MRPL40-203ENST00000471259 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
MRPL40-203ENST00000471259 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
MRPL40-203ENST00000471259 HERV-K104P63124 156 aa6.84□□□□□ -1.31
MRPL40-203ENST00000471259 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
MRPL40-203ENST00000471259 C9JAW5 83 aa6.83□□□□□ -1.32
MRPL40-203ENST00000471259 LEPROTO15243 131 aa6.83□□□□□ -1.32
MRPL40-203ENST00000471259 LGALS3P17931 250 aaKnown RBP6.83□□□□□ -1.32
MRPL40-203ENST00000471259 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
MRPL40-203ENST00000471259 UBE2BP63146 152 aa6.83□□□□□ -1.32
MRPL40-203ENST00000471259 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
MRPL40-203ENST00000471259 PPDPFQ9H3Y8 114 aa6.83□□□□□ -1.32
MRPL40-203ENST00000471259 TRBV27A0A0K0K1C4 114 aa6.82□□□□□ -1.32
MRPL40-203ENST00000471259 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
MRPL40-203ENST00000471259 VCYO14598 125 aa6.82□□□□□ -1.32
MRPL40-203ENST00000471259 NDUFA1O15239 70 aa6.82□□□□□ -1.32
MRPL40-203ENST00000471259 TSHBP01222 138 aa6.82□□□□□ -1.32
MRPL40-203ENST00000471259 CXCL5P42830 114 aa6.82□□□□□ -1.32
MRPL40-203ENST00000471259 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
MRPL40-203ENST00000471259 MUC2Q02817 5179 aa6.81□□□□□ -1.32
MRPL40-203ENST00000471259 TRAV13-1A0A0B4J241 112 aa6.81□□□□□ -1.32
MRPL40-203ENST00000471259 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
MRPL40-203ENST00000471259 J3QQQ9 107 aa6.81□□□□□ -1.32
MRPL40-203ENST00000471259 SMIM20Q8N5G0 67 aa6.81□□□□□ -1.32
MRPL40-203ENST00000471259 COPS9Q8WXC6 57 aa6.81□□□□□ -1.32
MRPL40-203ENST00000471259 OPRPNQ99935 248 aaPredicted RBP6.81□□□□□ -1.32
MRPL40-203ENST00000471259 UQCRQO14949 82 aa6.8□□□□□ -1.32
MRPL40-203ENST00000471259 TIMM17BO60830 172 aa6.8□□□□□ -1.32
MRPL40-203ENST00000471259 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
MRPL40-203ENST00000471259 POLR2KP53803 58 aaKnown RBP6.8□□□□□ -1.32
MRPL40-203ENST00000471259 MEIG1Q5JSS6 88 aa6.8□□□□□ -1.32
MRPL40-203ENST00000471259 C5orf38Q86SI9 138 aa6.8□□□□□ -1.32
MRPL40-203ENST00000471259 AMELXQ99217 191 aa6.8□□□□□ -1.32
MRPL40-203ENST00000471259 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
MRPL40-203ENST00000471259 KRTAP1-4P0C5Y4 121 aa6.79□□□□□ -1.32
MRPL40-203ENST00000471259 C5orf47Q569G3 176 aa6.79□□□□□ -1.32
MRPL40-203ENST00000471259 LINC00643Q86TS7 51 aa6.79□□□□□ -1.32
MRPL40-203ENST00000471259 A4D1N5 150 aa6.78□□□□□ -1.32
MRPL40-203ENST00000471259 FAM19A5Q7Z5A7 132 aaPredicted RBP6.78□□□□□ -1.32
MRPL40-203ENST00000471259 TIMM21Q9BVV7 248 aa6.78□□□□□ -1.32
MRPL40-203ENST00000471259 UBE2D4Q9Y2X8 147 aa6.78□□□□□ -1.32
MRPL40-203ENST00000471259 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
MRPL40-203ENST00000471259 J3KT08 172 aa6.77□□□□□ -1.33
MRPL40-203ENST00000471259 LST1O00453 97 aa6.77□□□□□ -1.33
MRPL40-203ENST00000471259 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
MRPL40-203ENST00000471259 ZNF861PO60384 105 aa6.76□□□□□ -1.33
MRPL40-203ENST00000471259 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
MRPL40-203ENST00000471259 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
MRPL40-203ENST00000471259 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
MRPL40-203ENST00000471259 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
MRPL40-203ENST00000471259 Q1RN00 199 aa6.75□□□□□ -1.33
MRPL40-203ENST00000471259 DAND5Q8N907 189 aa6.75□□□□□ -1.33
MRPL40-203ENST00000471259 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
MRPL40-203ENST00000471259 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
MRPL40-203ENST00000471259 FAM168BA1KXE4 195 aa6.74□□□□□ -1.33
MRPL40-203ENST00000471259 RNASE13Q5GAN3 156 aaKnown RBP6.74□□□□□ -1.33
MRPL40-203ENST00000471259 OR13C6PQ8NH95 151 aa6.74□□□□□ -1.33
MRPL40-203ENST00000471259 IGHV3OR16-9A0A0B4J2B5 98 aa6.73□□□□□ -1.33
MRPL40-203ENST00000471259 ATOX1O00244 68 aa6.73□□□□□ -1.33
MRPL40-203ENST00000471259 CRYGAP11844 174 aa6.73□□□□□ -1.33
MRPL40-203ENST00000471259 TEX49A0A1B0GTD5 131 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 NDUFC2-KCTD14E9PQ53 114 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 TRIAP1O43715 76 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 TRACP01848 142 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 RPL28P46779 137 aaKnown RBP6.72□□□□□ -1.33
MRPL40-203ENST00000471259 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 MUSTN1Q8IVN3 82 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 TYMSOSQ8TAI1 123 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
MRPL40-203ENST00000471259 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
MRPL40-203ENST00000471259 MRPS36P82909 103 aaKnown RBP6.71□□□□□ -1.34
MRPL40-203ENST00000471259 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.34
MRPL40-203ENST00000471259 KRTAP11-1Q8IUC1 163 aa6.71□□□□□ -1.34
MRPL40-203ENST00000471259 COX7CP15954 63 aa6.7□□□□□ -1.34
MRPL40-203ENST00000471259 TMEM258P61165 79 aa6.7□□□□□ -1.34
MRPL40-203ENST00000471259 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
MRPL40-203ENST00000471259 HIST1H4AP62805 103 aaKnown RBP6.69□□□□□ -1.34
MRPL40-203ENST00000471259 LITAFQ99732 161 aa6.69□□□□□ -1.34
MRPL40-203ENST00000471259 FAM236AA0A1B0GUQ0 79 aa6.68□□□□□ -1.34
MRPL40-203ENST00000471259 FAM236BA0A1B0GV22 79 aa6.68□□□□□ -1.34
MRPL40-203ENST00000471259 TINCRA0A1B0GVN0 87 aa6.68□□□□□ -1.34
MRPL40-203ENST00000471259 PRSS2P07478 247 aa6.68□□□□□ -1.34
MRPL40-203ENST00000471259 SFTA2Q6UW10 78 aa6.68□□□□□ -1.34
MRPL40-203ENST00000471259 LINC01561Q8N1V8 128 aa6.68□□□□□ -1.34
MRPL40-203ENST00000471259 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
MRPL40-203ENST00000471259 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
MRPL40-203ENST00000471259 C22orf24Q9Y442 160 aa6.66□□□□□ -1.34
MRPL40-203ENST00000471259 IGLV4-3A0A075B6K6 122 aa6.65□□□□□ -1.34
MRPL40-203ENST00000471259 BCE1O60756 84 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms