RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 SPENQ96T58 3664 aaKnown RBP2.4□□□□□ -2.03
ITGA4-205ENST00000468948 PDZD2O15018 2839 aa2.4□□□□□ -2.03
ITGA4-205ENST00000468948 AKAP6Q13023 2319 aa2.4□□□□□ -2.03
ITGA4-205ENST00000468948 NAV3Q8IVL0 2385 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 MTORP42345 2549 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 NF1P21359 2839 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 HIVEP1P15822 2718 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 HMGN2P05204 90 aaKnown RBP2.39□□□□□ -2.03
ITGA4-205ENST00000468948 GCHFRP30047 84 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 BAGE3Q86Y29 109 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 BAGE2Q86Y30 109 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 CCL19Q99731 98 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 CSMD1Q96PZ7 3565 aa2.39□□□□□ -2.03
ITGA4-205ENST00000468948 CSMD2Q7Z408 3487 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 FLNAP21333 2647 aaKnown RBP2.38□□□□□ -2.03
ITGA4-205ENST00000468948 ABCA2Q9BZC7 2435 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 TRBV25-1A0A075B6N4 114 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 A0A1B0GWA3 101 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 PPYP01298 95 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 COX6CP09669 75 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 DCHS2Q6V1P9 2916 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 FAM223AQ8IWN6 122 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 Q8N6K4 173 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 IFI27L1Q96BM0 104 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 LIMD2Q9BT23 127 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 MAP1AP78559 2803 aaPredicted RBP2.38□□□□□ -2.03
ITGA4-205ENST00000468948 ANKHD1Q8IWZ3 2542 aaKnown RBP2.38□□□□□ -2.03
ITGA4-205ENST00000468948 NBPF19A0A087WUL8 3843 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 ABCA4P78363 2273 aa2.38□□□□□ -2.03
ITGA4-205ENST00000468948 ACANP16112 2415 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 SPG11Q96JI7 2443 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 TRAV22A0A0B4J277 110 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 MYMXA0A1B0GTQ4 84 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 NDUFA11Q86Y39 141 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 DEFB107AQ8IZN7 70 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 SPTSSBQ8NFR3 76 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 BSNQ9UPA5 3926 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 DNAJC13O75165 2243 aa2.37□□□□□ -2.03
ITGA4-205ENST00000468948 IQCF6A8MYZ5 107 aa2.36□□□□□ -2.03
ITGA4-205ENST00000468948 JMJD7-PLA2G4BH0Y9G9 81 aa2.36□□□□□ -2.03
ITGA4-205ENST00000468948 Q5VV11 94 aa2.36□□□□□ -2.03
ITGA4-205ENST00000468948 ZNF818PQ6ZRF7 136 aa2.36□□□□□ -2.03
ITGA4-205ENST00000468948 BPESC1Q9GZL8 116 aa2.36□□□□□ -2.03
ITGA4-205ENST00000468948 HILPDAQ9Y5L2 63 aa2.36□□□□□ -2.03
ITGA4-205ENST00000468948 ARL2-SNX15V9GYD0 113 aa2.36□□□□□ -2.03
ITGA4-205ENST00000468948 NCOA6Q14686 2063 aaPredicted RBP2.36□□□□□ -2.03
ITGA4-205ENST00000468948 JMJD1CQ15652 2540 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 NIPBLQ6KC79 2804 aaeCLIP2.35□□□□□ -2.03
ITGA4-205ENST00000468948 CEBPZOSA8MTT3 80 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 TMEM14DPA8MWL7 114 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 TFF3Q07654 80 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 ATP5EP2Q5VTU8 51 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 Q6JHZ5 121 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 C20orf197Q8N268 126 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 TOMM5Q8N4H5 51 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 WFDC10AQ9H1F0 79 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 NINQ8N4C6 2090 aa2.35□□□□□ -2.03
ITGA4-205ENST00000468948 HRNRQ86YZ3 2850 aaPredicted RBP2.35□□□□□ -2.03
ITGA4-205ENST00000468948 MED12Q93074 2177 aa2.34□□□□□ -2.03
ITGA4-205ENST00000468948 FBN3Q75N90 2809 aa2.34□□□□□ -2.03
ITGA4-205ENST00000468948 TRAV23DV6A0A075B6W5 121 aa2.34□□□□□ -2.03
ITGA4-205ENST00000468948 EDDM3BP56851 147 aa2.34□□□□□ -2.03
ITGA4-205ENST00000468948 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
ITGA4-205ENST00000468948 PLGLAQ15195 96 aa2.34□□□□□ -2.03
ITGA4-205ENST00000468948 RPS27LQ71UM5 84 aaKnown RBP2.34□□□□□ -2.03
ITGA4-205ENST00000468948 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.03
ITGA4-205ENST00000468948 TLN2Q9Y4G6 2542 aa2.33□□□□□ -2.04
ITGA4-205ENST00000468948 LOC101927531A0A1B0GV80 90 aa2.33□□□□□ -2.04
ITGA4-205ENST00000468948 TMEM30CPA0ZSE6 113 aa2.33□□□□□ -2.04
ITGA4-205ENST00000468948 FAM223BA6NKX1 122 aa2.33□□□□□ -2.04
ITGA4-205ENST00000468948 F8WEM9 126 aa2.33□□□□□ -2.04
ITGA4-205ENST00000468948 IGHV3-33P01772 117 aa2.33□□□□□ -2.04
ITGA4-205ENST00000468948 IFI27P40305 119 aaPredicted RBP2.33□□□□□ -2.04
ITGA4-205ENST00000468948 ZNF815PA8K554 130 aa2.32□□□□□ -2.04
ITGA4-205ENST00000468948 CHKB-CPT1BH3BT56 60 aa2.32□□□□□ -2.04
ITGA4-205ENST00000468948 FAM103A1Q9BTL3 118 aaKnown RBP2.32□□□□□ -2.04
ITGA4-205ENST00000468948 UBE2D4Q9Y2X8 147 aa2.32□□□□□ -2.04
ITGA4-205ENST00000468948 SONP18583 2426 aaKnown RBP2.32□□□□□ -2.04
ITGA4-205ENST00000468948 CSPG4Q6UVK1 2322 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 NSD1Q96L73 2696 aaPredicted RBP2.31□□□□□ -2.04
ITGA4-205ENST00000468948 DEFB108AA8MXU0 73 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 ATXN8Q156A1 80 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 C10orf128Q5T292 105 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 NMES1Q9C002 83 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 TMEM14BQ9NUH8 114 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 GNG13Q9P2W3 67 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 USF3Q68DE3 2245 aa2.31□□□□□ -2.04
ITGA4-205ENST00000468948 ZFHX3Q15911 3703 aa2.3□□□□□ -2.04
ITGA4-205ENST00000468948 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
ITGA4-205ENST00000468948 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
ITGA4-205ENST00000468948 SAA2P0DJI9 122 aaPredicted RBP2.3□□□□□ -2.04
ITGA4-205ENST00000468948 UBE2D1P51668 147 aa2.3□□□□□ -2.04
ITGA4-205ENST00000468948 SMIM4Q8WVI0 70 aa2.3□□□□□ -2.04
ITGA4-205ENST00000468948 PROK2Q9HC23 129 aa2.3□□□□□ -2.04
ITGA4-205ENST00000468948 PSENENQ9NZ42 101 aa2.3□□□□□ -2.04
ITGA4-205ENST00000468948 NBEAL1Q6ZS30 2694 aa2.29□□□□□ -2.04
ITGA4-205ENST00000468948 COL6A5A8TX70 2615 aa2.29□□□□□ -2.04
ITGA4-205ENST00000468948 TRBV10-1A0A0K0K1A3 114 aa2.29□□□□□ -2.04
ITGA4-205ENST00000468948 LYNX1G3V0Z9 82 aa2.29□□□□□ -2.04
ITGA4-205ENST00000468948 H3BVH4 76 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms