RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 WFDC13Q8IUB5 93 aa-0.07□□□□□ -2.42
SMC4-208ENST00000467468 RGPD8O14715 1765 aaPredicted RBP-0.07□□□□□ -2.42
SMC4-208ENST00000467468 RGPD5Q99666 1765 aa-0.07□□□□□ -2.42
SMC4-208ENST00000467468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.08□□□□□ -2.421e-7■■■□□ 17.3
SMC4-208ENST00000467468 SPRR2BP35325 72 aa-0.08□□□□□ -2.42
SMC4-208ENST00000467468 ADIRFQ15847 76 aa-0.08□□□□□ -2.42
SMC4-208ENST00000467468 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.08□□□□□ -2.42
SMC4-208ENST00000467468 POLR1AO95602 1720 aaPredicted RBP-0.08□□□□□ -2.42
SMC4-208ENST00000467468 NCOA2Q15596 1464 aa-0.09□□□□□ -2.42
SMC4-208ENST00000467468 FLNCQ14315 2725 aa-0.09□□□□□ -2.42
SMC4-208ENST00000467468 LTN1O94822 1766 aa-0.1□□□□□ -2.43
SMC4-208ENST00000467468 LRP2P98164 4655 aa-0.1□□□□□ -2.43
SMC4-208ENST00000467468 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
SMC4-208ENST00000467468 DIP2BQ9P265 1576 aa-0.11□□□□□ -2.43
SMC4-208ENST00000467468 ZNF831Q5JPB2 1677 aa-0.11□□□□□ -2.43
SMC4-208ENST00000467468 TIAM2Q8IVF5 1701 aa-0.12□□□□□ -2.43
SMC4-208ENST00000467468 DEFB121Q5J5C9 76 aa-0.12□□□□□ -2.43
SMC4-208ENST00000467468 EP300Q09472 2414 aaPredicted RBP-0.12□□□□□ -2.43
SMC4-208ENST00000467468 ERVK-7P63135 1459 aa-0.12□□□□□ -2.43
SMC4-208ENST00000467468 MAGI3Q5TCQ9 1506 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 NEBP20929 6669 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 ARHGAP35Q9NRY4 1499 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 NDUFA3O95167 84 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 DEFB135Q30KP9 77 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 SPTA1P02549 2419 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 HECTD4Q9Y4D8 3996 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 DCAF1Q9Y4B6 1507 aa-0.13□□□□□ -2.43
SMC4-208ENST00000467468 MUC12Q9UKN1 5478 aa-0.14□□□□□ -2.43
SMC4-208ENST00000467468 ATP5EP2Q5VTU8 51 aa-0.14□□□□□ -2.43
SMC4-208ENST00000467468 PIK3C2BO00750 1634 aa-0.14□□□□□ -2.43
SMC4-208ENST00000467468 STAB1Q9NY15 2570 aa-0.14□□□□□ -2.43
SMC4-208ENST00000467468 DOT1LQ8TEK3 1739 aa-0.15□□□□□ -2.43
SMC4-208ENST00000467468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.15□□□□□ -2.438e-11■■■■■ 62
SMC4-208ENST00000467468 UMAD1C9J7I0 102 aa-0.15□□□□□ -2.43
SMC4-208ENST00000467468 NWD1Q149M9 1564 aa-0.15□□□□□ -2.43
SMC4-208ENST00000467468 LRP1BQ9NZR2 4599 aa-0.16□□□□□ -2.43
SMC4-208ENST00000467468 DOPEY1Q5JWR5 2465 aa-0.16□□□□□ -2.43
SMC4-208ENST00000467468 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.16□□□□□ -2.44
SMC4-208ENST00000467468 H3BUT2 72 aa-0.16□□□□□ -2.44
SMC4-208ENST00000467468 IFI6P09912 130 aa-0.16□□□□□ -2.44
SMC4-208ENST00000467468 CHD8Q9HCK8 2581 aa-0.17□□□□□ -2.44
SMC4-208ENST00000467468 BVES-AS1Q5T3Y7 98 aa-0.17□□□□□ -2.44
SMC4-208ENST00000467468 KDM5DQ9BY66 1539 aa-0.18□□□□□ -2.44
SMC4-208ENST00000467468 IFI27P40305 119 aaPredicted RBP-0.18□□□□□ -2.44
SMC4-208ENST00000467468 CCDC88BA6NC98 1476 aa-0.18□□□□□ -2.44
SMC4-208ENST00000467468 ABCC1P33527 1531 aa-0.18□□□□□ -2.44
SMC4-208ENST00000467468 ARFGEF2Q9Y6D5 1785 aa-0.19□□□□□ -2.44
SMC4-208ENST00000467468 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.19□□□□□ -2.44
SMC4-208ENST00000467468 CICQ96RK0 1608 aaPredicted RBP-0.19□□□□□ -2.44
SMC4-208ENST00000467468 LCE6AA0A183 80 aa-0.19□□□□□ -2.44
SMC4-208ENST00000467468 NSD1Q96L73 2696 aaPredicted RBP-0.2□□□□□ -2.44
SMC4-208ENST00000467468 NESP48681 1621 aa-0.2□□□□□ -2.44
SMC4-208ENST00000467468 DCHS2Q6V1P9 2916 aa-0.2□□□□□ -2.44
SMC4-208ENST00000467468 PTPN23Q9H3S7 1636 aa-0.2□□□□□ -2.44
SMC4-208ENST00000467468 SETXQ7Z333 2677 aaKnown RBP-0.2□□□□□ -2.44
SMC4-208ENST00000467468 C4AP0C0L4 1744 aa-0.21□□□□□ -2.44
SMC4-208ENST00000467468 C4BP0C0L5 1744 aa-0.21□□□□□ -2.44
SMC4-208ENST00000467468 SMIM13P0DJ93 91 aa-0.21□□□□□ -2.44
SMC4-208ENST00000467468 ADAMTS12P58397 1594 aa-0.22□□□□□ -2.44
SMC4-208ENST00000467468 CFAP74Q9C0B2 1584 aa-0.22□□□□□ -2.44
SMC4-208ENST00000467468 A0A087WXM4 84 aa-0.22□□□□□ -2.44
SMC4-208ENST00000467468 C3orf79P0CE67 100 aa-0.22□□□□□ -2.44
SMC4-208ENST00000467468 NREPQ16612 68 aa-0.22□□□□□ -2.44
SMC4-208ENST00000467468 PRO3102Q9H379 93 aa-0.22□□□□□ -2.44
SMC4-208ENST00000467468 WNK1Q9H4A3 2382 aa-0.22□□□□□ -2.44
SMC4-208ENST00000467468 C18orf32Q8TCD1 76 aa-0.23□□□□□ -2.45
SMC4-208ENST00000467468 MUC2Q02817 5179 aa-0.23□□□□□ -2.45
SMC4-208ENST00000467468 SCRIBQ14160 1630 aa-0.24□□□□□ -2.45
SMC4-208ENST00000467468 REV3LO60673 3130 aa-0.24□□□□□ -2.45
SMC4-208ENST00000467468 HMGA1P17096 107 aaKnown RBP-0.24□□□□□ -2.45
SMC4-208ENST00000467468 KRTAP20-2Q3LI61 65 aa-0.24□□□□□ -2.45
SMC4-208ENST00000467468 APC2O95996 2303 aa-0.24□□□□□ -2.45
SMC4-208ENST00000467468 MAP1BP46821 2468 aaKnown RBP-0.24□□□□□ -2.45
SMC4-208ENST00000467468 FLNAP21333 2647 aaKnown RBP-0.24□□□□□ -2.45
SMC4-208ENST00000467468 SPTBN4Q9H254 2564 aa-0.25□□□□□ -2.45
SMC4-208ENST00000467468 NDUFA4O00483 81 aa-0.25□□□□□ -2.45
SMC4-208ENST00000467468 RRBP1Q9P2E9 1410 aaKnown RBP-0.25□□□□□ -2.45
SMC4-208ENST00000467468 PCLOQ9Y6V0 5065 aa-0.25□□□□□ -2.45
SMC4-208ENST00000467468 COL6A3P12111 3177 aa-0.26□□□□□ -2.45
SMC4-208ENST00000467468 WIZO95785 1651 aa-0.26□□□□□ -2.45
SMC4-208ENST00000467468 LINC00158P58513 81 aa-0.26□□□□□ -2.45
SMC4-208ENST00000467468 FLNBO75369 2602 aaKnown RBP-0.26□□□□□ -2.45
SMC4-208ENST00000467468 CREBBPQ92793 2442 aa-0.26□□□□□ -2.45
SMC4-208ENST00000467468 SCN11AQ9UI33 1791 aa-0.27□□□□□ -2.45
SMC4-208ENST00000467468 KMT2CQ8NEZ4 4911 aaKnown RBP-0.27□□□□□ -2.45
SMC4-208ENST00000467468 KRTAP19-7Q3SYF9 63 aa-0.27□□□□□ -2.45
SMC4-208ENST00000467468 PLXNC1O60486 1568 aa-0.28□□□□□ -2.45
SMC4-208ENST00000467468 ANKARQ7Z5J8 1434 aa-0.28□□□□□ -2.45
SMC4-208ENST00000467468 ACANP16112 2415 aa-0.28□□□□□ -2.45
SMC4-208ENST00000467468 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
SMC4-208ENST00000467468 MT4P47944 62 aa-0.28□□□□□ -2.45
SMC4-208ENST00000467468 CD163L1Q9NR16 1453 aa-0.29□□□□□ -2.46
SMC4-208ENST00000467468 CFAP43Q8NDM7 1665 aa-0.29□□□□□ -2.46
SMC4-208ENST00000467468 TENM2Q9NT68 2774 aa-0.29□□□□□ -2.46
SMC4-208ENST00000467468 CNOT1A5YKK6 2376 aaKnown RBP-0.29□□□□□ -2.46
SMC4-208ENST00000467468 H0YGG7 62 aa-0.29□□□□□ -2.46
SMC4-208ENST00000467468 PKHD1P08F94 4074 aa-0.29□□□□□ -2.46
SMC4-208ENST00000467468 ANKRD50Q9ULJ7 1429 aa-0.3□□□□□ -2.46
SMC4-208ENST00000467468 PCNX1Q96RV3 2341 aa-0.3□□□□□ -2.46
SMC4-208ENST00000467468 SPRR2AP35326 72 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms