RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ADAMTS12P58397 1594 aa-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 LAMA5O15230 3695 aa-0.41□□□□□ -2.47
CCDC93-205ENST00000466171 NDUFA3O95167 84 aa-0.41□□□□□ -2.48
CCDC93-205ENST00000466171 CYB5AP00167 134 aa-0.41□□□□□ -2.48
CCDC93-205ENST00000466171 ATP7BP35670 1465 aa-0.41□□□□□ -2.48
CCDC93-205ENST00000466171 CICQ96RK0 1608 aaPredicted RBP-0.42□□□□□ -2.48
CCDC93-205ENST00000466171 PTPN23Q9H3S7 1636 aa-0.42□□□□□ -2.48
CCDC93-205ENST00000466171 SPRR2EP22531 72 aa-0.42□□□□□ -2.48
CCDC93-205ENST00000466171 WFDC9Q8NEX5 89 aa-0.42□□□□□ -2.48
CCDC93-205ENST00000466171 RGPD1P0DJD0 1748 aa-0.42□□□□□ -2.48
CCDC93-205ENST00000466171 HERC1Q15751 4861 aa-0.42□□□□□ -2.48
CCDC93-205ENST00000466171 NEBP20929 6669 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 NEXMIFQ5QGS0 1516 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 C4AP0C0L4 1744 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 C4BP0C0L5 1744 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 UBR1Q8IWV7 1749 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 CEP162Q5TB80 1403 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 LYSTQ99698 3801 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 Q9H521 79 aa-0.43□□□□□ -2.48
CCDC93-205ENST00000466171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.43□□□□□ -2.485e-9■■■■□ 23.3
CCDC93-205ENST00000466171 SUPT6HQ7KZ85 1726 aaKnown RBP-0.44□□□□□ -2.48
CCDC93-205ENST00000466171 TRAV21A0A0B4J279 112 aa-0.44□□□□□ -2.48
CCDC93-205ENST00000466171 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.44□□□□□ -2.48
CCDC93-205ENST00000466171 KNL1Q8NG31 2342 aa-0.44□□□□□ -2.48
CCDC93-205ENST00000466171 RGPD8O14715 1765 aaPredicted RBP-0.45□□□□□ -2.48
CCDC93-205ENST00000466171 RGPD4Q7Z3J3 1758 aa-0.45□□□□□ -2.48
CCDC93-205ENST00000466171 RGPD5Q99666 1765 aa-0.45□□□□□ -2.48
CCDC93-205ENST00000466171 SPTBN4Q9H254 2564 aa-0.45□□□□□ -2.48
CCDC93-205ENST00000466171 MYMXA0A1B0GTQ4 84 aa-0.45□□□□□ -2.48
CCDC93-205ENST00000466171 COX6B2Q6YFQ2 88 aa-0.45□□□□□ -2.48
CCDC93-205ENST00000466171 DNAH6Q9C0G6 4158 aa-0.46□□□□□ -2.48
CCDC93-205ENST00000466171 NF1P21359 2839 aa-0.46□□□□□ -2.48
CCDC93-205ENST00000466171 TROQ12816 1431 aaPredicted RBP-0.46□□□□□ -2.48
CCDC93-205ENST00000466171 FAT1Q14517 4588 aa-0.46□□□□□ -2.48
CCDC93-205ENST00000466171 DOPEY1Q5JWR5 2465 aa-0.46□□□□□ -2.48
CCDC93-205ENST00000466171 RGPD3A6NKT7 1758 aaPredicted RBP-0.46□□□□□ -2.48
CCDC93-205ENST00000466171 REV3LO60673 3130 aa-0.47□□□□□ -2.48
CCDC93-205ENST00000466171 POLR1AO95602 1720 aaPredicted RBP-0.47□□□□□ -2.48
CCDC93-205ENST00000466171 AKAP13Q12802 2813 aa-0.47□□□□□ -2.48
CCDC93-205ENST00000466171 NBPF19A0A087WUL8 3843 aa-0.47□□□□□ -2.48
CCDC93-205ENST00000466171 H3BNG1 76 aa-0.47□□□□□ -2.48
CCDC93-205ENST00000466171 K7EP34 96 aa-0.47□□□□□ -2.48
CCDC93-205ENST00000466171 S100A16Q96FQ6 103 aaKnown RBP-0.47□□□□□ -2.48
CCDC93-205ENST00000466171 CCNB3Q8WWL7 1395 aa-0.47□□□□□ -2.49
CCDC93-205ENST00000466171 TIAM2Q8IVF5 1701 aa-0.47□□□□□ -2.49
CCDC93-205ENST00000466171 TGP01266 2768 aa-0.47□□□□□ -2.49
CCDC93-205ENST00000466171 LTN1O94822 1766 aa-0.47□□□□□ -2.49
CCDC93-205ENST00000466171 FAT3Q8TDW7 4589 aa-0.48□□□□□ -2.49
CCDC93-205ENST00000466171 TMEM131LA2VDJ0 1609 aa-0.48□□□□□ -2.49
CCDC93-205ENST00000466171 CEBPZOSA8MTT3 80 aa-0.48□□□□□ -2.49
CCDC93-205ENST00000466171 SNRPFP62306 86 aaKnown RBP-0.48□□□□□ -2.49
CCDC93-205ENST00000466171 PYY3Q5JQD4 70 aa-0.48□□□□□ -2.49
CCDC93-205ENST00000466171 PRO3102Q9H379 93 aa-0.48□□□□□ -2.49
CCDC93-205ENST00000466171 NBASA2RRP1 2371 aa-0.48□□□□□ -2.49
CCDC93-205ENST00000466171 NWD1Q149M9 1564 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 USP32Q8NFA0 1604 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 DNAH9Q9NYC9 4486 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 AKAP9Q99996 3911 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 MXRA5Q9NR99 2828 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 TRANK1O15050 2925 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 KRTAP20-2Q3LI61 65 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 V9GYS6 101 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 STARD9Q9P2P6 4700 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 PLIN4Q96Q06 1357 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 NESP48681 1621 aa-0.49□□□□□ -2.49
CCDC93-205ENST00000466171 SCN11AQ9UI33 1791 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 SONP18583 2426 aaKnown RBP-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 NDUFB1O75438 58 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 ACYP1P07311 99 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 LINC00158P58513 81 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 DEFA5Q01523 94 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 LINC00643Q86TS7 51 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 NCOA2Q15596 1464 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 TNRC18O15417 2968 aaPredicted RBP-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 ABCC3O15438 1527 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 DOT1LQ8TEK3 1739 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 PDE4DIPQ5VU43 2346 aa-0.5□□□□□ -2.49
CCDC93-205ENST00000466171 C3orf79P0CE67 100 aa-0.51□□□□□ -2.49
CCDC93-205ENST00000466171 KIF14Q15058 1648 aa-0.51□□□□□ -2.49
CCDC93-205ENST00000466171 ZNF831Q5JPB2 1677 aa-0.51□□□□□ -2.49
CCDC93-205ENST00000466171 RABAC1Q9UI14 185 aa-0.51□□□□□ -2.49
CCDC93-205ENST00000466171 TTC37Q6PGP7 1564 aa-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 URB2Q14146 1524 aaKnown RBP-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 PRRC2CQ9Y520 2896 aaKnown RBP-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 ANKRD50Q9ULJ7 1429 aa-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 PKHD1L1Q86WI1 4243 aa-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 VPS13BQ7Z7G8 4022 aa-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 PVALEFA0A1B0GWK0 134 aa-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 SPRR2FQ96RM1 72 aa-0.52□□□□□ -2.49
CCDC93-205ENST00000466171 MAP3K4Q9Y6R4 1608 aa-0.53□□□□□ -2.49
CCDC93-205ENST00000466171 PLXNC1O60486 1568 aa-0.53□□□□□ -2.49
CCDC93-205ENST00000466171 HERC2O95714 4834 aa-0.53□□□□□ -2.49
CCDC93-205ENST00000466171 HECTD1Q9ULT8 2610 aa-0.53□□□□□ -2.49
CCDC93-205ENST00000466171 EPG5Q9HCE0 2579 aa-0.53□□□□□ -2.5
CCDC93-205ENST00000466171 UBR4Q5T4S7 5183 aa-0.54□□□□□ -2.5
CCDC93-205ENST00000466171 UMAD1C9J7I0 102 aa-0.54□□□□□ -2.5
CCDC93-205ENST00000466171 IFI27P40305 119 aaPredicted RBP-0.54□□□□□ -2.5
CCDC93-205ENST00000466171 DNAH3Q8TD57 4116 aa-0.54□□□□□ -2.5
CCDC93-205ENST00000466171 SPG11Q96JI7 2443 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms