RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 CRYBG1Q9Y4K1 1723 aa-0.78□□□□□ -2.53
XRN1-205ENST00000465507 ATP10BO94823 1461 aa-0.79□□□□□ -2.54
XRN1-205ENST00000465507 KIF20BQ96Q89 1820 aa-0.79□□□□□ -2.54
XRN1-205ENST00000465507 NMSQ5H8A3 153 aa-0.79□□□□□ -2.54
XRN1-205ENST00000465507 COL14A1Q05707 1796 aaKnown RBP-0.79□□□□□ -2.54
XRN1-205ENST00000465507 AKAP9Q99996 3911 aa-0.8□□□□□ -2.54
XRN1-205ENST00000465507 CLTCQ00610 1675 aaKnown RBP-0.8□□□□□ -2.54
XRN1-205ENST00000465507 NDUFA3O95167 84 aa-0.8□□□□□ -2.54
XRN1-205ENST00000465507 GYPAP02724 150 aa-0.8□□□□□ -2.54
XRN1-205ENST00000465507 CICQ96RK0 1608 aaPredicted RBP-0.8□□□□□ -2.54
XRN1-205ENST00000465507 MYH4Q9Y623 1939 aa-0.8□□□□□ -2.54
XRN1-205ENST00000465507 HTTP42858 3142 aa-0.8□□□□□ -2.54
XRN1-205ENST00000465507 BCORQ6W2J9 1755 aa-0.8□□□□□ -2.54
XRN1-205ENST00000465507 S100A8P05109 93 aa-0.81□□□□□ -2.54
XRN1-205ENST00000465507 PKIAP61925 76 aa-0.81□□□□□ -2.54
XRN1-205ENST00000465507 COX6B2Q6YFQ2 88 aa-0.81□□□□□ -2.54
XRN1-205ENST00000465507 CUBNO60494 3623 aa-0.81□□□□□ -2.54
XRN1-205ENST00000465507 NEXMIFQ5QGS0 1516 aa-0.82□□□□□ -2.54
XRN1-205ENST00000465507 A0A1B0GUT8 65 aa-0.82□□□□□ -2.54
XRN1-205ENST00000465507 H0YGG7 62 aa-0.82□□□□□ -2.54
XRN1-205ENST00000465507 SMIM11AP58511 58 aa-0.82□□□□□ -2.54
XRN1-205ENST00000465507 PLGLAQ15195 96 aa-0.82□□□□□ -2.54
XRN1-205ENST00000465507 GAFA1Q96PS6 74 aa-0.82□□□□□ -2.54
XRN1-205ENST00000465507 UBR3Q6ZT12 1888 aa-0.82□□□□□ -2.54
XRN1-205ENST00000465507 RGPD2P0DJD1 1756 aa-0.83□□□□□ -2.54
XRN1-205ENST00000465507 ATP7BP35670 1465 aa-0.83□□□□□ -2.54
XRN1-205ENST00000465507 IQCF6A8MYZ5 107 aa-0.83□□□□□ -2.54
XRN1-205ENST00000465507 PEA15Q15121 130 aa-0.83□□□□□ -2.54
XRN1-205ENST00000465507 ZZEF1O43149 2961 aa-0.83□□□□□ -2.54
XRN1-205ENST00000465507 HIVEP1P15822 2718 aa-0.83□□□□□ -2.54
XRN1-205ENST00000465507 FASNP49327 2511 aaKnown RBP-0.84□□□□□ -2.54
XRN1-205ENST00000465507 TROQ12816 1431 aaPredicted RBP-0.84□□□□□ -2.54
XRN1-205ENST00000465507 QSER1Q2KHR3 1735 aa-0.84□□□□□ -2.54
XRN1-205ENST00000465507 LRRC7Q96NW7 1537 aa-0.84□□□□□ -2.54
XRN1-205ENST00000465507 DNAH3Q8TD57 4116 aa-0.85□□□□□ -2.55
XRN1-205ENST00000465507 KRTAP20-2Q3LI61 65 aa-0.85□□□□□ -2.55
XRN1-205ENST00000465507 UBR4Q5T4S7 5183 aa-0.85□□□□□ -2.55
XRN1-205ENST00000465507 DMXL1Q9Y485 3027 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 LRRC9Q6ZRR7 1453 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 RGPD1P0DJD0 1748 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 PKD1L3Q7Z443 1732 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 USH2AO75445 5202 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 CEP162Q5TB80 1403 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 TRAV21A0A0B4J279 112 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 RPL38P63173 70 aaKnown RBP-0.86□□□□□ -2.55
XRN1-205ENST00000465507 PREX1Q8TCU6 1659 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 ALKQ9UM73 1620 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 ANKRD26Q9UPS8 1709 aa-0.86□□□□□ -2.55
XRN1-205ENST00000465507 MUC17Q685J3 4493 aa-0.87□□□□□ -2.55
XRN1-205ENST00000465507 SPRR2FQ96RM1 72 aa-0.87□□□□□ -2.55
XRN1-205ENST00000465507 DSPP15924 2871 aaKnown RBP-0.87□□□□□ -2.55
XRN1-205ENST00000465507 APOBP04114 4563 aaKnown RBP-0.88□□□□□ -2.55
XRN1-205ENST00000465507 HERC2O95714 4834 aa-0.88□□□□□ -2.55
XRN1-205ENST00000465507 MYMXA0A1B0GTQ4 84 aa-0.88□□□□□ -2.55
XRN1-205ENST00000465507 CYB5AP00167 134 aa-0.88□□□□□ -2.55
XRN1-205ENST00000465507 MT1AP04731 61 aa-0.88□□□□□ -2.55
XRN1-205ENST00000465507 PYY3Q5JQD4 70 aa-0.88□□□□□ -2.55
XRN1-205ENST00000465507 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.88□□□□□ -2.55
XRN1-205ENST00000465507 RGPD8O14715 1765 aaPredicted RBP-0.89□□□□□ -2.55
XRN1-205ENST00000465507 RGPD5Q99666 1765 aa-0.89□□□□□ -2.55
XRN1-205ENST00000465507 UBR1Q8IWV7 1749 aa-0.9□□□□□ -2.55
XRN1-205ENST00000465507 MYO3AQ8NEV4 1616 aa-0.9□□□□□ -2.55
XRN1-205ENST00000465507 ANK3Q12955 4377 aaKnown RBP-0.91□□□□□ -2.55
XRN1-205ENST00000465507 TEP1Q99973 2627 aaKnown RBP-0.91□□□□□ -2.55
XRN1-205ENST00000465507 MT4P47944 62 aa-0.91□□□□□ -2.56
XRN1-205ENST00000465507 WFDC9Q8NEX5 89 aa-0.91□□□□□ -2.56
XRN1-205ENST00000465507 USP32Q8NFA0 1604 aa-0.91□□□□□ -2.56
XRN1-205ENST00000465507 PKHD1L1Q86WI1 4243 aa-0.91□□□□□ -2.56
XRN1-205ENST00000465507 AKAP12Q02952 1782 aa-0.91□□□□□ -2.56
XRN1-205ENST00000465507 H3BNG1 76 aa-0.92□□□□□ -2.56
XRN1-205ENST00000465507 K7EP34 96 aa-0.92□□□□□ -2.56
XRN1-205ENST00000465507 DNAH11Q96DT5 4516 aa-0.92□□□□□ -2.56
XRN1-205ENST00000465507 CCNB3Q8WWL7 1395 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 PLIN4Q96Q06 1357 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 VPS13BQ7Z7G8 4022 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 LAMA1P25391 3075 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 ITPR3Q14573 2671 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 C3orf79P0CE67 100 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 SNRPFP62306 86 aaKnown RBP-0.93□□□□□ -2.56
XRN1-205ENST00000465507 LINC00643Q86TS7 51 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 S100A16Q96FQ6 103 aaKnown RBP-0.93□□□□□ -2.56
XRN1-205ENST00000465507 C4AP0C0L4 1744 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 C4BP0C0L5 1744 aa-0.93□□□□□ -2.56
XRN1-205ENST00000465507 ANKRD11Q6UB99 2663 aaPredicted RBP-0.93□□□□□ -2.56
XRN1-205ENST00000465507 KALRNO60229 2985 aa-0.94□□□□□ -2.56
XRN1-205ENST00000465507 CEBPZOSA8MTT3 80 aa-0.94□□□□□ -2.56
XRN1-205ENST00000465507 PRO3102Q9H379 93 aa-0.94□□□□□ -2.56
XRN1-205ENST00000465507 Q9H521 79 aa-0.94□□□□□ -2.56
XRN1-205ENST00000465507 RABAC1Q9UI14 185 aa-0.94□□□□□ -2.56
XRN1-205ENST00000465507 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.94□□□□□ -2.56
XRN1-205ENST00000465507 LINC00158P58513 81 aa-0.95□□□□□ -2.56
XRN1-205ENST00000465507 V9GYS6 101 aa-0.95□□□□□ -2.56
XRN1-205ENST00000465507 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.95□□□□□ -2.56
XRN1-205ENST00000465507 NDUFB1O75438 58 aa-0.96□□□□□ -2.56
XRN1-205ENST00000465507 USP9YO00507 2555 aaPredicted RBP-0.96□□□□□ -2.56
XRN1-205ENST00000465507 SUPT6HQ7KZ85 1726 aaKnown RBP-0.96□□□□□ -2.56
XRN1-205ENST00000465507 PVALEFA0A1B0GWK0 134 aa-0.97□□□□□ -2.56
XRN1-205ENST00000465507 C9orf92A6NGG3 77 aa-0.97□□□□□ -2.56
XRN1-205ENST00000465507 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.97□□□□□ -2.56
XRN1-205ENST00000465507 POLR1AO95602 1720 aaPredicted RBP-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms