RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 NCOA2Q15596 1464 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 LRRC9Q6ZRR7 1453 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 TENM2Q9NT68 2774 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 BCORQ6W2J9 1755 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 H3BVH4 76 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 C3orf79P0CE67 100 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 SMIM13P0DJ93 91 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 SPRR2BP35325 72 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 ST20Q9HBF5 79 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 HSPG2P98160 4391 aa-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 EPRSP07814 1512 aaKnown RBP-0.08□□□□□ -2.42
NDUFA4-202ENST00000463308 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 NBEAL1Q6ZS30 2694 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 RGPD3A6NKT7 1758 aaPredicted RBP-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 RGPD4Q7Z3J3 1758 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 FAT1Q14517 4588 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 FANCAO15360 1455 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 ATP7BP35670 1465 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 ATRQ13535 2644 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 FAT2Q9NYQ8 4349 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 ANKRD26Q9UPS8 1709 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 GVINP1Q7Z2Y8 2422 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 TROQ12816 1431 aaPredicted RBP-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 PRKDCP78527 4128 aaKnown RBP-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 NDUFA4O00483 81 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 NREPQ16612 68 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 USH2AO75445 5202 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 FLGP20930 4061 aaPredicted RBP-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 RYR1P21817 5038 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 MAP1BP46821 2468 aaKnown RBP-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 LPAP08519 4548 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
NDUFA4-202ENST00000463308 WNK1Q9H4A3 2382 aa-0.1□□□□□ -2.42
NDUFA4-202ENST00000463308 LAMA5O15230 3695 aa-0.1□□□□□ -2.42
NDUFA4-202ENST00000463308 UACAQ9BZF9 1416 aa-0.1□□□□□ -2.43
NDUFA4-202ENST00000463308 STAB2Q8WWQ8 2551 aa-0.1□□□□□ -2.43
NDUFA4-202ENST00000463308 COX6B2Q6YFQ2 88 aa-0.1□□□□□ -2.43
NDUFA4-202ENST00000463308 RYR3Q15413 4870 aa-0.1□□□□□ -2.43
NDUFA4-202ENST00000463308 RGPD1P0DJD0 1748 aa-0.1□□□□□ -2.43
NDUFA4-202ENST00000463308 APC2O95996 2303 aa-0.1□□□□□ -2.43
NDUFA4-202ENST00000463308 BIRC6Q9NR09 4857 aa-0.1□□□□□ -2.43
NDUFA4-202ENST00000463308 ZFHX3Q15911 3703 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 CNOT1A5YKK6 2376 aaKnown RBP-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 CEP162Q5TB80 1403 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 RNF213Q63HN8 5207 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 MYO3AQ8NEV4 1616 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 KRTAP19-8Q3LI54 63 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 KRTAP6-2Q3LI66 62 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 TGP01266 2768 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 COL6A3P12111 3177 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 CHD8Q9HCK8 2581 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 PREX1Q8TCU6 1659 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 DNAH3Q8TD57 4116 aa-0.11□□□□□ -2.43
NDUFA4-202ENST00000463308 EP300Q09472 2414 aaPredicted RBP-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 URB2Q14146 1524 aaKnown RBP-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 KIF14Q15058 1648 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 SUPT6HQ7KZ85 1726 aaKnown RBP-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 UBR1Q8IWV7 1749 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 KIAA1551Q9HCM1 1747 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 PKHD1P08F94 4074 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 DEFB130BP0DP73 79 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 DEFB130AP0DP74 79 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 IAPPP10997 89 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 BVES-AS1Q5T3Y7 98 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 ATP5EP2Q5VTU8 51 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 AKAP9Q99996 3911 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 SPTA1P02549 2419 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 SMARCA2P51531 1590 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 TTC37Q6PGP7 1564 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 PKHD1L1Q86WI1 4243 aa-0.12□□□□□ -2.43
NDUFA4-202ENST00000463308 CICQ96RK0 1608 aaPredicted RBP-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 RYR2Q92736 4967 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 MXRA5Q9NR99 2828 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 PRRC2CQ9Y520 2896 aaKnown RBP-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 DEFB106AQ8N104 65 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 REV3LO60673 3130 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 ACANP16112 2415 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 CREBBPQ92793 2442 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 PCNX1Q96RV3 2341 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 STARD9Q9P2P6 4700 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 C4AP0C0L4 1744 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 C4BP0C0L5 1744 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 QSER1Q2KHR3 1735 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 DOT1LQ8TEK3 1739 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 USP32Q8NFA0 1604 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 USP9YO00507 2555 aaPredicted RBP-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 ABCC3O15438 1527 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 LRP1BQ9NZR2 4599 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 ANKRD50Q9ULJ7 1429 aa-0.13□□□□□ -2.43
NDUFA4-202ENST00000463308 NIPBLQ6KC79 2804 aaeCLIP-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 VPS13BQ7Z7G8 4022 aa-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 RGPD8O14715 1765 aaPredicted RBP-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 LTN1O94822 1766 aa-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 RGPD5Q99666 1765 aa-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 CCDC18Q5T9S5 1454 aa-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 TRANK1O15050 2925 aa-0.14□□□□□ -2.43
NDUFA4-202ENST00000463308 H0YAA0 97 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms