RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SCN11AQ9UI33 1791 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 ARFGEF2Q9Y6D5 1785 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 HSPG2P98160 4391 aa0.07□□□□□ -2.4
HMGN3P1-201ENST00000453847 S100A13Q99584 98 aa0.07□□□□□ -2.4
HMGN3P1-201ENST00000453847 TNRC6CQ9HCJ0 1690 aaKnown RBP0.07□□□□□ -2.4
HMGN3P1-201ENST00000453847 CFAP74Q9C0B2 1584 aa0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 CCL22O00626 93 aa0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 RGPD8O14715 1765 aaPredicted RBP0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 RGPD5Q99666 1765 aa0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 ADIRFQ15847 76 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 WFDC9Q8NEX5 89 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 NWD1Q149M9 1564 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 NESP48681 1621 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 C4AP0C0L4 1744 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 C4BP0C0L5 1744 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 H3BUT2 72 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 BVES-AS1Q5T3Y7 98 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 EP300Q09472 2414 aaPredicted RBP0.03□□□□□ -2.4
HMGN3P1-201ENST00000453847 DEFB121Q5J5C9 76 aa0.03□□□□□ -2.4
HMGN3P1-201ENST00000453847 HEPN1Q6WQI6 88 aa0.03□□□□□ -2.4
HMGN3P1-201ENST00000453847 CFAP43Q8NDM7 1665 aa0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 HECTD4Q9Y4D8 3996 aa0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 ABCA8O94911 1581 aa0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 LRRIQ1Q96JM4 1722 aa0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 CNOT1A5YKK6 2376 aaKnown RBP0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 LOC730098B7Z3J9 87 aa0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 WFDC13Q8IUB5 93 aa0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 RRBP1Q9P2E9 1410 aaKnown RBP0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 CHD8Q9HCK8 2581 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 FLNCQ14315 2725 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 IFI6P09912 130 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 ABCC1P33527 1531 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 CDKN2A-AS1Q9UH64 79 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 PLCH1Q4KWH8 1693 aa-0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 NDUFB1O75438 58 aa-0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 M0R2T5 61 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 NDUFA3O95167 84 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 PTPN23Q9H3S7 1636 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 ADAMTS12P58397 1594 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 KNL1Q8NG31 2342 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 RICTORQ6R327 1708 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 LCE6AA0A183 80 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 RPL38P63173 70 aaKnown RBP-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 ATP5EP2Q5VTU8 51 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 MAP1BP46821 2468 aaKnown RBP-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 WNK1Q9H4A3 2382 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 MAP3K1Q13233 1512 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 CD163L1Q9NR16 1453 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 LRP2P98164 4655 aa-0.04□□□□□ -2.42
HMGN3P1-201ENST00000453847 DCHS2Q6V1P9 2916 aa-0.05□□□□□ -2.42
HMGN3P1-201ENST00000453847 UMAD1C9J7I0 102 aa-0.05□□□□□ -2.42
HMGN3P1-201ENST00000453847 COX6B2Q6YFQ2 88 aa-0.05□□□□□ -2.42
HMGN3P1-201ENST00000453847 SMIM13P0DJ93 91 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 HMGA1P17096 107 aaKnown RBP-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 C18orf32Q8TCD1 76 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 CCDC88BA6NC98 1476 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 SETXQ7Z333 2677 aaKnown RBP-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 GPR98Q8WXG9 6306 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 NREPQ16612 68 aa-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 IQGAP3Q86VI3 1631 aa-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 CICQ96RK0 1608 aaPredicted RBP-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 SPRR2BP35325 72 aa-0.08□□□□□ -2.42
HMGN3P1-201ENST00000453847 MYO5CQ9NQX4 1742 aa-0.08□□□□□ -2.42
HMGN3P1-201ENST00000453847 LRP1BQ9NZR2 4599 aa-0.08□□□□□ -2.42
HMGN3P1-201ENST00000453847 DDX60LQ5H9U9 1706 aaKnown RBP-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 PARP4Q9UKK3 1724 aaKnown RBP-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 WIZO95785 1651 aa-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 APC2O95996 2303 aa-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 ANKARQ7Z5J8 1434 aa-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 IFI27P40305 119 aaPredicted RBP-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 DEFB135Q30KP9 77 aa-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 SYNE2Q8WXH0 6885 aaKnown RBP-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 COL6A3P12111 3177 aa-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 PLXNC1O60486 1568 aa-0.11□□□□□ -2.43
HMGN3P1-201ENST00000453847 FSIP2Q5CZC0 6907 aa-0.11□□□□□ -2.43
HMGN3P1-201ENST00000453847 A0A087WXM4 84 aa-0.11□□□□□ -2.43
HMGN3P1-201ENST00000453847 TRANK1O15050 2925 aa-0.12□□□□□ -2.43
HMGN3P1-201ENST00000453847 NDUFA4O00483 81 aa-0.12□□□□□ -2.43
HMGN3P1-201ENST00000453847 ACANP16112 2415 aa-0.12□□□□□ -2.43
HMGN3P1-201ENST00000453847 TJP1Q07157 1748 aa-0.13□□□□□ -2.43
HMGN3P1-201ENST00000453847 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
HMGN3P1-201ENST00000453847 H0YAA0 97 aa-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 FLNBO75369 2602 aaKnown RBP-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 FLNAP21333 2647 aaKnown RBP-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 TENM2Q9NT68 2774 aa-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 PKHD1P08F94 4074 aa-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 RNF17Q9BXT8 1623 aaKnown RBP-0.16□□□□□ -2.43
HMGN3P1-201ENST00000453847 AKAP13Q12802 2813 aa-0.16□□□□□ -2.43
HMGN3P1-201ENST00000453847 PCNX1Q96RV3 2341 aa-0.16□□□□□ -2.44
HMGN3P1-201ENST00000453847 NRAPQ86VF7 1730 aa-0.17□□□□□ -2.44
HMGN3P1-201ENST00000453847 PRO3102Q9H379 93 aa-0.17□□□□□ -2.44
HMGN3P1-201ENST00000453847 ANKRD50Q9ULJ7 1429 aa-0.17□□□□□ -2.44
HMGN3P1-201ENST00000453847 LMTK2Q8IWU2 1503 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 ITSN1Q15811 1721 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 LINC00158P58513 81 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 UGGT2Q9NYU1 1516 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 PKD1P98161 4303 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms