RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 NDUFA1O15239 70 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 DEFB1P60022 68 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 NREPQ16612 68 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 ATP5EP2Q5VTU8 51 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 Q9Y3F1 56 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 SPTBN2O15020 2390 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 PKDREJQ9NTG1 2253 aa1.36□□□□□ -2.19
VPS8-211ENST00000452140 TECTAO75443 2155 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 CFAP47Q6ZTR5 3102 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 A0A096LNT2 108 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 TRAV21A0A0B4J279 112 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 NDUFC1O43677 76 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 C9orf116Q5BN46 136 aaPredicted RBP1.35□□□□□ -2.19
VPS8-211ENST00000452140 SMIM11BQ8TCY0 68 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 GAFA1Q96PS6 74 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 NBEAQ8NFP9 2946 aa1.35□□□□□ -2.19
VPS8-211ENST00000452140 CACNA1BQ00975 2339 aa1.34□□□□□ -2.19
VPS8-211ENST00000452140 RANBP2P49792 3224 aaKnown RBP1.34□□□□□ -2.19
VPS8-211ENST00000452140 TRGV2A0A075B6R0 118 aa1.34□□□□□ -2.19
VPS8-211ENST00000452140 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.34□□□□□ -2.19
VPS8-211ENST00000452140 HCG22E2RYF7 251 aa1.34□□□□□ -2.19
VPS8-211ENST00000452140 JMJD7-PLA2G4BH0Y9G9 81 aa1.34□□□□□ -2.19
VPS8-211ENST00000452140 CCL3L1P16619 93 aa1.34□□□□□ -2.19
VPS8-211ENST00000452140 COX6A2Q02221 97 aa1.34□□□□□ -2.19
VPS8-211ENST00000452140 MKI67P46013 3256 aaKnown RBP1.34□□□□□ -2.2
VPS8-211ENST00000452140 CFAP54Q96N23 3096 aa1.34□□□□□ -2.2
VPS8-211ENST00000452140 LCE6AA0A183 80 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 NUPR2A6NF83 97 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 CHKB-CPT1BH3BT56 60 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 MRPL33O75394 65 aaKnown RBP1.33□□□□□ -2.2
VPS8-211ENST00000452140 DEFB108BQ8NET1 73 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 PRR15LQ9BU68 103 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 CDKN2A-AS1Q9UH64 79 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 VPS13AQ96RL7 3174 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
VPS8-211ENST00000452140 ROS1P08922 2347 aa1.33□□□□□ -2.2
VPS8-211ENST00000452140 CNOT1A5YKK6 2376 aaKnown RBP1.33□□□□□ -2.2
VPS8-211ENST00000452140 VCANP13611 3396 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 APC2O95996 2303 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 IGKV3-7A0A075B6H7 116 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 M0QY20 66 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 CCL18P55774 89 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 HAMPP81172 84 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 DEFB133Q30KQ1 61 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 DMAC1Q96GE9 116 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 UBL5Q9BZL1 73 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 CYP4F30PQ9H0H9 118 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 EP400Q96L91 3159 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 C5orf42Q9H799 3197 aa1.32□□□□□ -2.2
VPS8-211ENST00000452140 DMDP11532 3685 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 NCOR1O75376 2440 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 SPTY2D1-AS1A0A0U1RR47 76 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 H0YGX0 51 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 PPP1R17O96001 155 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 SPINK7P58062 85 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 FAM74A4Q5TZK3 123 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 Q6ZSA8 131 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 CDC42SE2Q9NRR3 84 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 PLAC8Q9NZF1 115 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 LAMA2P24043 3122 aaKnown RBP1.31□□□□□ -2.2
VPS8-211ENST00000452140 PTPRZ1P23471 2315 aaPredicted RBP1.31□□□□□ -2.2
VPS8-211ENST00000452140 AKAP6Q13023 2319 aa1.31□□□□□ -2.2
VPS8-211ENST00000452140 ZDBF2Q9HCK1 2354 aa1.3□□□□□ -2.2
VPS8-211ENST00000452140 LOC101927531A0A1B0GV80 90 aa1.3□□□□□ -2.2
VPS8-211ENST00000452140 PDE6GP18545 87 aa1.3□□□□□ -2.2
VPS8-211ENST00000452140 RPL37AP61513 92 aaKnown RBP1.3□□□□□ -2.2
VPS8-211ENST00000452140 DEFB119Q8N690 84 aa1.3□□□□□ -2.2
VPS8-211ENST00000452140 COX7B2Q8TF08 81 aa1.3□□□□□ -2.2
VPS8-211ENST00000452140 LAMA3Q16787 3333 aa1.3□□□□□ -2.2
VPS8-211ENST00000452140 CACNA1EQ15878 2313 aa1.3□□□□□ -2.2
VPS8-211ENST00000452140 ACACAQ13085 2346 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 TPRP12270 2363 aaKnown RBP1.29□□□□□ -2.2
VPS8-211ENST00000452140 FREM2Q5SZK8 3169 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 AKAP9Q99996 3911 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 KRTAP4-1Q9BYQ7 146 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 FRYQ5TBA9 3013 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 HTTP42858 3142 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 WNK1Q9H4A3 2382 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 BRCA2P51587 3418 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 ANKRD17O75179 2603 aaKnown RBP1.29□□□□□ -2.2
VPS8-211ENST00000452140 SPENQ96T58 3664 aaKnown RBP1.29□□□□□ -2.2
VPS8-211ENST00000452140 LAMA1P25391 3075 aa1.29□□□□□ -2.2
VPS8-211ENST00000452140 SPEGQ15772 3267 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 WDFY3Q8IZQ1 3526 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 IGF2RP11717 2491 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 ZZEF1O43149 2961 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 CHD7Q9P2D1 2997 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 FRYLO94915 3013 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 TRIOO75962 3097 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 PRUNE2Q8WUY3 3088 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 CSMD1Q96PZ7 3565 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 LINC00959A0A1B0GUT2 108 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 A8MTW9 85 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 INE1O15225 51 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 LINC00158P58513 81 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 LINC00575Q6W349 94 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 LENEPQ9Y5L5 61 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms