RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
VPS8-211ENST00000452140 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
VPS8-211ENST00000452140 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
VPS8-211ENST00000452140 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
VPS8-211ENST00000452140 FOXD1Q16676 465 aa16.16■□□□□ 0.18
VPS8-211ENST00000452140 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
VPS8-211ENST00000452140 MSH5O43196 834 aa15.23■□□□□ 0.03
VPS8-211ENST00000452140 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
VPS8-211ENST00000452140 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
VPS8-211ENST00000452140 ADRA2BP18089 450 aa15.03■□□□□ -0
VPS8-211ENST00000452140 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
VPS8-211ENST00000452140 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.19
VPS8-211ENST00000452140 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
VPS8-211ENST00000452140 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
VPS8-211ENST00000452140 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
VPS8-211ENST00000452140 KCNA4P22459 653 aa13.39□□□□□ -0.27
VPS8-211ENST00000452140 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
VPS8-211ENST00000452140 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
VPS8-211ENST00000452140 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
VPS8-211ENST00000452140 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
VPS8-211ENST00000452140 CACNB1Q02641 598 aaPredicted RBP13.07□□□□□ -0.32
VPS8-211ENST00000452140 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
VPS8-211ENST00000452140 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
VPS8-211ENST00000452140 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
VPS8-211ENST00000452140 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
VPS8-211ENST00000452140 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
VPS8-211ENST00000452140 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
VPS8-211ENST00000452140 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
VPS8-211ENST00000452140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.38
VPS8-211ENST00000452140 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
VPS8-211ENST00000452140 ZBTB22O15209 634 aa12.35□□□□□ -0.43
VPS8-211ENST00000452140 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
VPS8-211ENST00000452140 CAPN15O75808 1086 aa12.2□□□□□ -0.46
VPS8-211ENST00000452140 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
VPS8-211ENST00000452140 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
VPS8-211ENST00000452140 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
VPS8-211ENST00000452140 APLP2Q06481 763 aa12.13□□□□□ -0.47
VPS8-211ENST00000452140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
VPS8-211ENST00000452140 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
VPS8-211ENST00000452140 DSG3P32926 999 aa12.1□□□□□ -0.47
VPS8-211ENST00000452140 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
VPS8-211ENST00000452140 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
VPS8-211ENST00000452140 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
VPS8-211ENST00000452140 ABCB7O75027 752 aa11.87□□□□□ -0.51
VPS8-211ENST00000452140 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
VPS8-211ENST00000452140 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
VPS8-211ENST00000452140 POLA2Q14181 598 aa11.67□□□□□ -0.54
VPS8-211ENST00000452140 POTEHQ6S545 545 aa11.64□□□□□ -0.55
VPS8-211ENST00000452140 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
VPS8-211ENST00000452140 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
VPS8-211ENST00000452140 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
VPS8-211ENST00000452140 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
VPS8-211ENST00000452140 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
VPS8-211ENST00000452140 FKBP8Q14318 412 aa11.28□□□□□ -0.6
VPS8-211ENST00000452140 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
VPS8-211ENST00000452140 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
VPS8-211ENST00000452140 FBLN2P98095 1184 aa11.18□□□□□ -0.62
VPS8-211ENST00000452140 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
VPS8-211ENST00000452140 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
VPS8-211ENST00000452140 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
VPS8-211ENST00000452140 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
VPS8-211ENST00000452140 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
VPS8-211ENST00000452140 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
VPS8-211ENST00000452140 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS8-211ENST00000452140 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
VPS8-211ENST00000452140 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
VPS8-211ENST00000452140 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
VPS8-211ENST00000452140 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
VPS8-211ENST00000452140 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
VPS8-211ENST00000452140 HAX1O00165 279 aa10.89□□□□□ -0.67
VPS8-211ENST00000452140 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
VPS8-211ENST00000452140 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
VPS8-211ENST00000452140 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
VPS8-211ENST00000452140 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
VPS8-211ENST00000452140 PROM2Q8N271 834 aa10.77□□□□□ -0.69
VPS8-211ENST00000452140 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
VPS8-211ENST00000452140 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
VPS8-211ENST00000452140 FBXO3Q9UK99 471 aa10.71□□□□□ -0.69
VPS8-211ENST00000452140 EVX2Q03828 476 aa10.65□□□□□ -0.7
VPS8-211ENST00000452140 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
VPS8-211ENST00000452140 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
VPS8-211ENST00000452140 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
VPS8-211ENST00000452140 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
VPS8-211ENST00000452140 IFNLR1Q8IU57 520 aaPredicted RBP10.51□□□□□ -0.73
VPS8-211ENST00000452140 FARP1Q9Y4F1 1045 aaPredicted RBP10.51□□□□□ -0.73
VPS8-211ENST00000452140 GABBR2O75899 941 aa10.48□□□□□ -0.73
VPS8-211ENST00000452140 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
VPS8-211ENST00000452140 CLCN6P51797 869 aa10.41□□□□□ -0.74
VPS8-211ENST00000452140 KLHL34Q8N239 644 aa10.38□□□□□ -0.75
VPS8-211ENST00000452140 PLCD3Q8N3E9 789 aa10.38□□□□□ -0.75
VPS8-211ENST00000452140 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
VPS8-211ENST00000452140 MIER1Q8N108 512 aa10.37□□□□□ -0.75
VPS8-211ENST00000452140 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
VPS8-211ENST00000452140 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
VPS8-211ENST00000452140 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
VPS8-211ENST00000452140 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPS8-211ENST00000452140 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
VPS8-211ENST00000452140 PKD2Q13563 968 aa10.27□□□□□ -0.77
VPS8-211ENST00000452140 LHX8Q68G74 356 aa10.24□□□□□ -0.77
VPS8-211ENST00000452140 DCBLD2Q96PD2 775 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms