RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 CHD9Q3L8U1 2897 aa1.18□□□□□ -2.22
VPS8-202ENST00000421069 LAMA2P24043 3122 aaKnown RBP1.18□□□□□ -2.22
VPS8-202ENST00000421069 ROS1P08922 2347 aa1.18□□□□□ -2.22
VPS8-202ENST00000421069 C5orf42Q9H799 3197 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 TRGV1A0A0A0MS02 117 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 TRBV30A0A0K0K1B3 111 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 H3BSH0 61 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 K7EMI3 77 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 NDUFB1O75438 58 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 COX17Q14061 63 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 C10orf113Q5VZT2 155 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 Q6ZQY7 126 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 CMC2Q9NRP2 79 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 LINC00846Q9NV44 126 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 CEP290O15078 2479 aa1.17□□□□□ -2.22
VPS8-202ENST00000421069 REV3LO60673 3130 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 CPSF4LA6NMK7 179 aaKnown RBP1.16□□□□□ -2.22
VPS8-202ENST00000421069 MRPL33O75394 65 aaKnown RBP1.16□□□□□ -2.22
VPS8-202ENST00000421069 ACYP2P14621 99 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 DEFB112Q30KQ8 113 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 ENHOQ6UWT2 76 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 Q96NJ1 140 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 SPRR4Q96PI1 79 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 TTTY10Q9BZA0 68 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 VCANP13611 3396 aa1.16□□□□□ -2.22
VPS8-202ENST00000421069 MED13LQ71F56 2210 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 TRBV6-1A0A0K0K1D8 114 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 LYNX1G3V0Z9 82 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 PRB3Q04118 309 aaPredicted RBP1.15□□□□□ -2.23
VPS8-202ENST00000421069 DEFB108BQ8NET1 73 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 GAFA1Q96PS6 74 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 UBL5Q9BZL1 73 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 ABRACLQ9P1F3 81 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 A0A0C4DFX4 3053 aa1.15□□□□□ -2.23
VPS8-202ENST00000421069 WDFY4Q6ZS81 3184 aa1.14□□□□□ -2.23
VPS8-202ENST00000421069 ZFHX3Q15911 3703 aa1.14□□□□□ -2.23
VPS8-202ENST00000421069 A0A1B0GU69 56 aa1.14□□□□□ -2.23
VPS8-202ENST00000421069 SPATA8Q6RVD6 105 aa1.14□□□□□ -2.23
VPS8-202ENST00000421069 LINC00472Q9H8W2 130 aa1.14□□□□□ -2.23
VPS8-202ENST00000421069 LCE6AA0A183 80 aa1.13□□□□□ -2.23
VPS8-202ENST00000421069 RPS27P42677 84 aaKnown RBP1.13□□□□□ -2.23
VPS8-202ENST00000421069 CACNA1CQ13936 2221 aa1.13□□□□□ -2.23
VPS8-202ENST00000421069 ZDBF2Q9HCK1 2354 aa1.12□□□□□ -2.23
VPS8-202ENST00000421069 M0R1W7 72 aa1.12□□□□□ -2.23
VPS8-202ENST00000421069 NDUFA4O00483 81 aa1.12□□□□□ -2.23
VPS8-202ENST00000421069 CAV3P56539 151 aa1.12□□□□□ -2.23
VPS8-202ENST00000421069 ABCA1O95477 2261 aa1.12□□□□□ -2.23
VPS8-202ENST00000421069 NCOR1O75376 2440 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 F5P12259 2224 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 CFAP54Q96N23 3096 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 SPTBN5Q9NRC6 3674 aaKnown RBP1.11□□□□□ -2.23
VPS8-202ENST00000421069 LINC00959A0A1B0GUT2 108 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 DEFB108AA8MXU0 73 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 COX7BP24311 80 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 PLNP26678 52 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 HAMPP81172 84 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 TIMM8BQ9Y5J9 83 aaPredicted RBP1.11□□□□□ -2.23
VPS8-202ENST00000421069 PTPRZ1P23471 2315 aaPredicted RBP1.11□□□□□ -2.23
VPS8-202ENST00000421069 CNTRLQ7Z7A1 2325 aa1.11□□□□□ -2.23
VPS8-202ENST00000421069 TRANK1O15050 2925 aa1.1□□□□□ -2.23
VPS8-202ENST00000421069 SMIM27A0A1W2PRY6 76 aa1.1□□□□□ -2.23
VPS8-202ENST00000421069 TFF3Q07654 80 aa1.1□□□□□ -2.23
VPS8-202ENST00000421069 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.1□□□□□ -2.23
VPS8-202ENST00000421069 VPS13AQ96RL7 3174 aa1.1□□□□□ -2.23
VPS8-202ENST00000421069 NCOR2Q9Y618 2525 aa1.1□□□□□ -2.23
VPS8-202ENST00000421069 CADP27708 2225 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 ASCC3Q8N3C0 2202 aaKnown RBP1.09□□□□□ -2.23
VPS8-202ENST00000421069 MUC3AQ02505 3323 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 TTC28Q96AY4 2481 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 DMXL1Q9Y485 3027 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 G3V318 75 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 H3BUX3 64 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 I3L3M4 83 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 SPINK4O60575 86 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 APELAP0DMC3 54 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 SERF2P84101 59 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 SSBP3-AS1Q7Z2R9 100 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 SMIM11BQ8TCY0 68 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 LEAP2Q969E1 77 aa1.09□□□□□ -2.23
VPS8-202ENST00000421069 USP34Q70CQ2 3546 aa1.09□□□□□ -2.24
VPS8-202ENST00000421069 EP300Q09472 2414 aaPredicted RBP1.09□□□□□ -2.24
VPS8-202ENST00000421069 FRYQ5TBA9 3013 aa1.09□□□□□ -2.24
VPS8-202ENST00000421069 TNCP24821 2201 aa1.08□□□□□ -2.24
VPS8-202ENST00000421069 CACNA1EQ15878 2313 aa1.08□□□□□ -2.24
VPS8-202ENST00000421069 Q6ZRX8 168 aa1.08□□□□□ -2.24
VPS8-202ENST00000421069 ZFHX4Q86UP3 3567 aa1.08□□□□□ -2.24
VPS8-202ENST00000421069 URB1O60287 2271 aaKnown RBP1.08□□□□□ -2.24
VPS8-202ENST00000421069 FRYLO94915 3013 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 SPEGQ15772 3267 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 A0A096LNT2 108 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 GVQW2A0A096LPI5 108 aaPredicted RBP1.07□□□□□ -2.24
VPS8-202ENST00000421069 ETDCA0A1B0GVM5 59 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 IGIPA6NJ69 53 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 PIN1P1O15428 100 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 LY6G6CO95867 125 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 DEFB136Q30KP8 78 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 DEFB114Q30KQ6 69 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 PLAC4Q8WY50 150 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 TRIOO75962 3097 aa1.07□□□□□ -2.24
VPS8-202ENST00000421069 BDP1A6H8Y1 2624 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms