RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 FAM218AQ96MZ4 157 aa7.36□□□□□ -1.23
CACNA1C-210ENST00000399606 CDH23Q9H251 3354 aa7.35□□□□□ -1.23
CACNA1C-210ENST00000399606 SZT2Q5T011 3432 aa7.35□□□□□ -1.23
CACNA1C-210ENST00000399606 A8MWP4 228 aa7.34□□□□□ -1.23
CACNA1C-210ENST00000399606 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
CACNA1C-210ENST00000399606 GVQW2A0A096LPI5 108 aaPredicted RBP7.33□□□□□ -1.24
CACNA1C-210ENST00000399606 A0A0G2JQZ4 141 aa7.33□□□□□ -1.24
CACNA1C-210ENST00000399606 A0A1W2PNN7 141 aa7.33□□□□□ -1.24
CACNA1C-210ENST00000399606 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
CACNA1C-210ENST00000399606 DNAH14Q0VDD8 3507 aa7.32□□□□□ -1.24
CACNA1C-210ENST00000399606 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
CACNA1C-210ENST00000399606 ZNF861PO60384 105 aa7.32□□□□□ -1.24
CACNA1C-210ENST00000399606 NCOR2Q9Y618 2525 aa7.31□□□□□ -1.24
CACNA1C-210ENST00000399606 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
CACNA1C-210ENST00000399606 TRBV7-4A0A0J9YYF1 115 aa7.3□□□□□ -1.24
CACNA1C-210ENST00000399606 CASC10Q5T4H9 136 aa7.3□□□□□ -1.24
CACNA1C-210ENST00000399606 MYO18BQ8IUG5 2567 aa7.3□□□□□ -1.24
CACNA1C-210ENST00000399606 H3BS24 57 aa7.29□□□□□ -1.24
CACNA1C-210ENST00000399606 IGLV7-43P04211 117 aa7.28□□□□□ -1.24
CACNA1C-210ENST00000399606 COL27A1Q8IZC6 1860 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-210ENST00000399606 C9orf163Q8N9P6 203 aa7.27□□□□□ -1.25
CACNA1C-210ENST00000399606 CD164Q04900 197 aa7.26□□□□□ -1.25
CACNA1C-210ENST00000399606 LCA10Q71F78 164 aa7.25□□□□□ -1.25
CACNA1C-210ENST00000399606 IGF2RP11717 2491 aa7.25□□□□□ -1.25
CACNA1C-210ENST00000399606 C19orf73Q9NVV2 129 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 PIEZO2Q9H5I5 2752 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 KRTAP10-3P60369 221 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 MYO9AB2RTY4 2548 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 JMJD1CQ15652 2540 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 TNP2Q05952 138 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 Q5VSD8 79 aa7.24□□□□□ -1.25
CACNA1C-210ENST00000399606 UNC80Q8N2C7 3258 aa7.23□□□□□ -1.25
CACNA1C-210ENST00000399606 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
CACNA1C-210ENST00000399606 ZFYVE26Q68DK2 2539 aa7.22□□□□□ -1.25
CACNA1C-210ENST00000399606 PTPRBP23467 1997 aa7.21□□□□□ -1.26
CACNA1C-210ENST00000399606 LAMA2P24043 3122 aaKnown RBP7.21□□□□□ -1.26
CACNA1C-210ENST00000399606 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
CACNA1C-210ENST00000399606 PRUNE2Q8WUY3 3088 aa7.2□□□□□ -1.26
CACNA1C-210ENST00000399606 SPINK7P58062 85 aa7.19□□□□□ -1.26
CACNA1C-210ENST00000399606 PCSK5Q92824 1860 aa7.19□□□□□ -1.26
CACNA1C-210ENST00000399606 PIEZO1Q92508 2521 aa7.18□□□□□ -1.26
CACNA1C-210ENST00000399606 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
CACNA1C-210ENST00000399606 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
CACNA1C-210ENST00000399606 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
CACNA1C-210ENST00000399606 BPTFQ12830 3046 aa7.16□□□□□ -1.26
CACNA1C-210ENST00000399606 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
CACNA1C-210ENST00000399606 ZNF462Q96JM2 2506 aa7.16□□□□□ -1.26
CACNA1C-210ENST00000399606 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
CACNA1C-210ENST00000399606 Q1T7F1 81 aa7.15□□□□□ -1.26
CACNA1C-210ENST00000399606 FAM104AQ969W3 186 aa7.15□□□□□ -1.27
CACNA1C-210ENST00000399606 C2CD3Q4AC94 2353 aa7.14□□□□□ -1.27
CACNA1C-210ENST00000399606 LINC00612Q8N6U2 182 aa7.13□□□□□ -1.27
CACNA1C-210ENST00000399606 CELSR3Q9NYQ7 3312 aa7.13□□□□□ -1.27
CACNA1C-210ENST00000399606 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
CACNA1C-210ENST00000399606 TLN1Q9Y490 2541 aaKnown RBP7.11□□□□□ -1.27
CACNA1C-210ENST00000399606 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
CACNA1C-210ENST00000399606 KCNQ1DNQ9H478 68 aa7.1□□□□□ -1.27
CACNA1C-210ENST00000399606 FN1P02751 2386 aaKnown RBP7.1□□□□□ -1.27
CACNA1C-210ENST00000399606 H7BZZ5 65 aa7.1□□□□□ -1.27
CACNA1C-210ENST00000399606 HRES1P13985 223 aa7.1□□□□□ -1.27
CACNA1C-210ENST00000399606 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
CACNA1C-210ENST00000399606 RANBP2P49792 3224 aaKnown RBP7.09□□□□□ -1.28
CACNA1C-210ENST00000399606 HTTP42858 3142 aa7.07□□□□□ -1.28
CACNA1C-210ENST00000399606 SPRR4Q96PI1 79 aa7.06□□□□□ -1.28
CACNA1C-210ENST00000399606 ABCA12Q86UK0 2595 aa7.04□□□□□ -1.28
CACNA1C-210ENST00000399606 MYO15AQ9UKN7 3530 aa7.03□□□□□ -1.28
CACNA1C-210ENST00000399606 Q8N377 158 aa7.03□□□□□ -1.28
CACNA1C-210ENST00000399606 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
CACNA1C-210ENST00000399606 SPANXA2-OT1Q8N9U9 137 aa7.03□□□□□ -1.28
CACNA1C-210ENST00000399606 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-210ENST00000399606 S4R3F8 94 aa7.02□□□□□ -1.29
CACNA1C-210ENST00000399606 EYSQ5T1H1 3165 aa7.01□□□□□ -1.29
CACNA1C-210ENST00000399606 LCE6AA0A183 80 aa7□□□□□ -1.29
CACNA1C-210ENST00000399606 A0A1B0GU33 70 aa6.99□□□□□ -1.29
CACNA1C-210ENST00000399606 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
CACNA1C-210ENST00000399606 F8P00451 2351 aa6.99□□□□□ -1.29
CACNA1C-210ENST00000399606 CNBPP62633 177 aaKnown RBP6.98□□□□□ -1.29
CACNA1C-210ENST00000399606 Q5XG85 94 aa6.97□□□□□ -1.29
CACNA1C-210ENST00000399606 VCANP13611 3396 aa6.97□□□□□ -1.29
CACNA1C-210ENST00000399606 SPEGQ15772 3267 aa6.95□□□□□ -1.3
CACNA1C-210ENST00000399606 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
CACNA1C-210ENST00000399606 OXTP01178 125 aa6.95□□□□□ -1.3
CACNA1C-210ENST00000399606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
CACNA1C-210ENST00000399606 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
CACNA1C-210ENST00000399606 KRTAP1-3Q8IUG1 177 aa6.93□□□□□ -1.3
CACNA1C-210ENST00000399606 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
CACNA1C-210ENST00000399606 A0A096LNT2 108 aa6.93□□□□□ -1.3
CACNA1C-210ENST00000399606 R4GN34 69 aa6.92□□□□□ -1.3
CACNA1C-210ENST00000399606 TLN2Q9Y4G6 2542 aa6.91□□□□□ -1.3
CACNA1C-210ENST00000399606 USP9XQ93008 2570 aaPredicted RBP6.91□□□□□ -1.3
CACNA1C-210ENST00000399606 SETD2Q9BYW2 2564 aaPredicted RBP6.91□□□□□ -1.3
CACNA1C-210ENST00000399606 KRTAP1-1Q07627 177 aa6.9□□□□□ -1.31
CACNA1C-210ENST00000399606 CFAP54Q96N23 3096 aa6.89□□□□□ -1.31
CACNA1C-210ENST00000399606 A0A0C4DFX4 3053 aa6.89□□□□□ -1.31
CACNA1C-210ENST00000399606 TRIOO75962 3097 aa6.89□□□□□ -1.31
CACNA1C-210ENST00000399606 ANKRD17O75179 2603 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-210ENST00000399606 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
CACNA1C-210ENST00000399606 GIG44P09565 113 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms