RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 RGPD1P0DJD0 1748 aa-0.27□□□□□ -2.45
TRAJ40-201ENST00000390497 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ40-201ENST00000390497 MAGI3Q5TCQ9 1506 aa-0.27□□□□□ -2.45
TRAJ40-201ENST00000390497 MAP1BP46821 2468 aaKnown RBP-0.27□□□□□ -2.45
TRAJ40-201ENST00000390497 CEBPZOSA8MTT3 80 aa-0.27□□□□□ -2.45
TRAJ40-201ENST00000390497 WNK1Q9H4A3 2382 aa-0.27□□□□□ -2.45
TRAJ40-201ENST00000390497 CICQ96RK0 1608 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ40-201ENST00000390497 CCDC88BA6NC98 1476 aa-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 FLNBO75369 2602 aaKnown RBP-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 AHNAKQ09666 5890 aaKnown RBP-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 SPRR2AP35326 72 aa-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 LELP1Q5T871 98 aa-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 WFDC9Q8NEX5 89 aa-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 USP32Q8NFA0 1604 aa-0.28□□□□□ -2.45
TRAJ40-201ENST00000390497 UBR3Q6ZT12 1888 aa-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 PPLO60437 1756 aa-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 POLR1AO95602 1720 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 ACANP16112 2415 aa-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 TRAV21A0A0B4J279 112 aa-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 KANTRA0A1W2PQU2 76 aa-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 NWD1Q149M9 1564 aa-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 TENM2Q9NT68 2774 aa-0.29□□□□□ -2.46
TRAJ40-201ENST00000390497 LRP1BQ9NZR2 4599 aa-0.3□□□□□ -2.46
TRAJ40-201ENST00000390497 H0YGG7 62 aa-0.3□□□□□ -2.46
TRAJ40-201ENST00000390497 GNG2P59768 71 aa-0.3□□□□□ -2.46
TRAJ40-201ENST00000390497 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
TRAJ40-201ENST00000390497 SMARCA2P51531 1590 aa-0.31□□□□□ -2.46
TRAJ40-201ENST00000390497 PDZD2O15018 2839 aa-0.31□□□□□ -2.46
TRAJ40-201ENST00000390497 NESP48681 1621 aa-0.31□□□□□ -2.46
TRAJ40-201ENST00000390497 REV3LO60673 3130 aa-0.31□□□□□ -2.46
TRAJ40-201ENST00000390497 MUC2Q02817 5179 aa-0.32□□□□□ -2.46
TRAJ40-201ENST00000390497 ATP5EP2Q5VTU8 51 aa-0.32□□□□□ -2.46
TRAJ40-201ENST00000390497 LTN1O94822 1766 aa-0.32□□□□□ -2.46
TRAJ40-201ENST00000390497 NCOA2Q15596 1464 aa-0.33□□□□□ -2.46
TRAJ40-201ENST00000390497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.33□□□□□ -2.46
TRAJ40-201ENST00000390497 C4AP0C0L4 1744 aa-0.33□□□□□ -2.46
TRAJ40-201ENST00000390497 C4BP0C0L5 1744 aa-0.33□□□□□ -2.46
TRAJ40-201ENST00000390497 PKHD1P08F94 4074 aa-0.33□□□□□ -2.46
TRAJ40-201ENST00000390497 PIK3C2BO00750 1634 aa-0.34□□□□□ -2.46
TRAJ40-201ENST00000390497 PLXNC1O60486 1568 aa-0.34□□□□□ -2.46
TRAJ40-201ENST00000390497 NDUFA3O95167 84 aa-0.34□□□□□ -2.46
TRAJ40-201ENST00000390497 SRRM2Q9UQ35 2752 aaKnown RBP-0.34□□□□□ -2.46
TRAJ40-201ENST00000390497 C3orf79P0CE67 100 aa-0.35□□□□□ -2.47
TRAJ40-201ENST00000390497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.35□□□□□ -2.47
TRAJ40-201ENST00000390497 CNOT1A5YKK6 2376 aaKnown RBP-0.35□□□□□ -2.47
TRAJ40-201ENST00000390497 MED14O60244 1454 aa-0.35□□□□□ -2.47
TRAJ40-201ENST00000390497 DIP2BQ9P265 1576 aa-0.36□□□□□ -2.47
TRAJ40-201ENST00000390497 LCE6AA0A183 80 aa-0.36□□□□□ -2.47
TRAJ40-201ENST00000390497 KRTAP19-7Q3SYF9 63 aa-0.36□□□□□ -2.47
TRAJ40-201ENST00000390497 CCDC18Q5T9S5 1454 aa-0.36□□□□□ -2.47
TRAJ40-201ENST00000390497 IFI27P40305 119 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ40-201ENST00000390497 KRTAP6-2Q3LI66 62 aa-0.37□□□□□ -2.47
TRAJ40-201ENST00000390497 PRO3102Q9H379 93 aa-0.37□□□□□ -2.47
TRAJ40-201ENST00000390497 THOC2Q8NI27 1593 aaKnown RBP-0.37□□□□□ -2.47
TRAJ40-201ENST00000390497 KDM5DQ9BY66 1539 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 DCAF1Q9Y4B6 1507 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 DEPDC5O75140 1603 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 DOT1LQ8TEK3 1739 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 UMAD1C9J7I0 102 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 SPRR2EP22531 72 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 TDRG1Q3Y452 100 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 ST20Q9HBF5 79 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 MAP1AP78559 2803 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 ABCC1P33527 1531 aa-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ40-201ENST00000390497 WIZO95785 1651 aa-0.39□□□□□ -2.47
TRAJ40-201ENST00000390497 HMGA1P17096 107 aaKnown RBP-0.39□□□□□ -2.47
TRAJ40-201ENST00000390497 ADIRFQ15847 76 aa-0.39□□□□□ -2.47
TRAJ40-201ENST00000390497 S100A13Q99584 98 aa-0.39□□□□□ -2.47
TRAJ40-201ENST00000390497 ZNF831Q5JPB2 1677 aa-0.4□□□□□ -2.47
TRAJ40-201ENST00000390497 TRANK1O15050 2925 aa-0.4□□□□□ -2.47
TRAJ40-201ENST00000390497 ARFGEF2Q9Y6D5 1785 aa-0.4□□□□□ -2.47
TRAJ40-201ENST00000390497 STAB2Q8WWQ8 2551 aa-0.41□□□□□ -2.47
TRAJ40-201ENST00000390497 SETD2Q9BYW2 2564 aaPredicted RBP-0.41□□□□□ -2.47
TRAJ40-201ENST00000390497 LINC00158P58513 81 aa-0.41□□□□□ -2.48
TRAJ40-201ENST00000390497 CFAP74Q9C0B2 1584 aa-0.41□□□□□ -2.48
TRAJ40-201ENST00000390497 AKAP13Q12802 2813 aa-0.42□□□□□ -2.48
TRAJ40-201ENST00000390497 CREBBPQ92793 2442 aa-0.42□□□□□ -2.48
TRAJ40-201ENST00000390497 ERVK-7P63135 1459 aa-0.42□□□□□ -2.48
TRAJ40-201ENST00000390497 NBEAL1Q6ZS30 2694 aa-0.42□□□□□ -2.48
TRAJ40-201ENST00000390497 SVEP1Q4LDE5 3571 aa-0.42□□□□□ -2.48
TRAJ40-201ENST00000390497 CFAP43Q8NDM7 1665 aa-0.43□□□□□ -2.48
TRAJ40-201ENST00000390497 IFI6P09912 130 aa-0.43□□□□□ -2.48
TRAJ40-201ENST00000390497 NREPQ16612 68 aa-0.43□□□□□ -2.48
TRAJ40-201ENST00000390497 DEFB121Q5J5C9 76 aa-0.43□□□□□ -2.48
TRAJ40-201ENST00000390497 KNL1Q8NG31 2342 aa-0.44□□□□□ -2.48
TRAJ40-201ENST00000390497 A0A087WXM4 84 aa-0.44□□□□□ -2.48
TRAJ40-201ENST00000390497 NDUFA4O00483 81 aa-0.44□□□□□ -2.48
TRAJ40-201ENST00000390497 MUC12Q9UKN1 5478 aa-0.44□□□□□ -2.48
TRAJ40-201ENST00000390497 SPTBN4Q9H254 2564 aa-0.46□□□□□ -2.48
TRAJ40-201ENST00000390497 HFM1A2PYH4 1435 aa-0.46□□□□□ -2.48
TRAJ40-201ENST00000390497 ANKRD50Q9ULJ7 1429 aa-0.46□□□□□ -2.48
TRAJ40-201ENST00000390497 C9orf92A6NGG3 77 aa-0.46□□□□□ -2.48
TRAJ40-201ENST00000390497 H0YAA0 97 aa-0.46□□□□□ -2.48
TRAJ40-201ENST00000390497 DDX60LQ5H9U9 1706 aaKnown RBP-0.47□□□□□ -2.48
TRAJ40-201ENST00000390497 ARHGAP35Q9NRY4 1499 aa-0.47□□□□□ -2.48
TRAJ40-201ENST00000390497 MAP3K1Q13233 1512 aa-0.47□□□□□ -2.48
TRAJ40-201ENST00000390497 LYNX1G3V0Z9 82 aa-0.47□□□□□ -2.48
TRAJ40-201ENST00000390497 H3BUT2 72 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms