RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 IGKV2-28A0A075B6P5 120 aa11.92□□□□□ -0.5
GTF3A-201ENST00000381140 TAX1BP3O14907 124 aa11.92□□□□□ -0.5
GTF3A-201ENST00000381140 IGKV2D-28P01615 120 aa11.92□□□□□ -0.5
GTF3A-201ENST00000381140 PRO1854Q9UHT4 67 aa11.92□□□□□ -0.5
GTF3A-201ENST00000381140 MYCBP2O75592 4640 aa11.91□□□□□ -0.5
GTF3A-201ENST00000381140 J3QL48 77 aa11.91□□□□□ -0.5
GTF3A-201ENST00000381140 VPREB1P12018 145 aa11.91□□□□□ -0.5
GTF3A-201ENST00000381140 Q8NDZ9 215 aa11.91□□□□□ -0.5
GTF3A-201ENST00000381140 TRAV13-2A0A0B4J235 113 aa11.89□□□□□ -0.51
GTF3A-201ENST00000381140 IGLV7-43P04211 117 aa11.89□□□□□ -0.51
GTF3A-201ENST00000381140 SPINK6Q6UWN8 80 aa11.89□□□□□ -0.51
GTF3A-201ENST00000381140 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
GTF3A-201ENST00000381140 KRTAP29-1A8MX34 341 aaPredicted RBP11.87□□□□□ -0.51
GTF3A-201ENST00000381140 LINC00337Q8N6G1 96 aa11.87□□□□□ -0.51
GTF3A-201ENST00000381140 DMBT1Q9UGM3 2413 aaPredicted RBP11.86□□□□□ -0.51
GTF3A-201ENST00000381140 C9orf118A6NHY6 69 aa11.85□□□□□ -0.51
GTF3A-201ENST00000381140 OXTP01178 125 aa11.85□□□□□ -0.51
GTF3A-201ENST00000381140 RPL13AP40429 203 aaKnown RBP11.85□□□□□ -0.51
GTF3A-201ENST00000381140 NCR3O14931 201 aa11.84□□□□□ -0.51
GTF3A-201ENST00000381140 TSPAN13O95857 204 aa11.84□□□□□ -0.51
GTF3A-201ENST00000381140 M0R378 163 aa11.81□□□□□ -0.52
GTF3A-201ENST00000381140 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
GTF3A-201ENST00000381140 LRP1Q07954 4544 aaKnown RBP11.8□□□□□ -0.52
GTF3A-201ENST00000381140 IGLV1-50A0A075B6I6 118 aa11.8□□□□□ -0.52
GTF3A-201ENST00000381140 DIRC1Q969H9 104 aa11.8□□□□□ -0.52
GTF3A-201ENST00000381140 TMEM126AQ9H061 195 aa11.8□□□□□ -0.52
GTF3A-201ENST00000381140 H3BUT2 72 aa11.79□□□□□ -0.52
GTF3A-201ENST00000381140 H7C2G1 150 aa11.79□□□□□ -0.52
GTF3A-201ENST00000381140 BCE1O60756 84 aa11.79□□□□□ -0.52
GTF3A-201ENST00000381140 Q1RN00 199 aa11.79□□□□□ -0.52
GTF3A-201ENST00000381140 OR13C6PQ8NH95 151 aa11.79□□□□□ -0.52
GTF3A-201ENST00000381140 IGLV6-57P01721 117 aa11.79□□□□□ -0.52
GTF3A-201ENST00000381140 FAT3Q8TDW7 4589 aa11.78□□□□□ -0.52
GTF3A-201ENST00000381140 S100A7L2Q5SY68 101 aa11.78□□□□□ -0.52
GTF3A-201ENST00000381140 NAA38Q9BRA0 125 aaKnown RBP11.78□□□□□ -0.52
GTF3A-201ENST00000381140 H0Y9J4 135 aa11.77□□□□□ -0.53
GTF3A-201ENST00000381140 UBE2AP49459 152 aa11.77□□□□□ -0.53
GTF3A-201ENST00000381140 A0A1W2PPM0 123 aa11.76□□□□□ -0.53
GTF3A-201ENST00000381140 ZNF861PO60384 105 aa11.76□□□□□ -0.53
GTF3A-201ENST00000381140 RPL28P46779 137 aaKnown RBP11.76□□□□□ -0.53
GTF3A-201ENST00000381140 SMIM11BQ8TCY0 68 aa11.75□□□□□ -0.53
GTF3A-201ENST00000381140 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
GTF3A-201ENST00000381140 TRIAP1O43715 76 aa11.74□□□□□ -0.53
GTF3A-201ENST00000381140 FAM19A1Q7Z5A9 133 aa11.74□□□□□ -0.53
GTF3A-201ENST00000381140 CBY1Q9Y3M2 126 aa11.74□□□□□ -0.53
GTF3A-201ENST00000381140 PSMB2P49721 201 aa11.73□□□□□ -0.53
GTF3A-201ENST00000381140 LYRM7Q5U5X0 104 aa11.73□□□□□ -0.53
GTF3A-201ENST00000381140 LINC01600Q96MT4 127 aa11.73□□□□□ -0.53
GTF3A-201ENST00000381140 A0A1B0GV90 55 aa11.72□□□□□ -0.53
GTF3A-201ENST00000381140 FABP2P12104 132 aa11.72□□□□□ -0.53
GTF3A-201ENST00000381140 PRLHP81277 87 aa11.72□□□□□ -0.53
GTF3A-201ENST00000381140 MT1HL1P0DM35 61 aa11.71□□□□□ -0.53
GTF3A-201ENST00000381140 TRAV23DV6A0A075B6W5 121 aa11.7□□□□□ -0.54
GTF3A-201ENST00000381140 COX6CP09669 75 aa11.7□□□□□ -0.54
GTF3A-201ENST00000381140 PRYO14603 147 aa11.68□□□□□ -0.54
GTF3A-201ENST00000381140 KCNQ1DNQ9H478 68 aa11.68□□□□□ -0.54
GTF3A-201ENST00000381140 SCGB1C2P0DMR2 95 aa11.67□□□□□ -0.54
GTF3A-201ENST00000381140 VAMP3Q15836 100 aa11.67□□□□□ -0.54
GTF3A-201ENST00000381140 KRTAP13-1Q8IUC0 172 aa11.67□□□□□ -0.54
GTF3A-201ENST00000381140 SPCS1Q9Y6A9 102 aa11.67□□□□□ -0.54
GTF3A-201ENST00000381140 TRBV20-1A0A075B6N2 111 aa11.65□□□□□ -0.55
GTF3A-201ENST00000381140 K7EP34 96 aa11.65□□□□□ -0.55
GTF3A-201ENST00000381140 ZNF73O43830 326 aaPredicted RBP11.65□□□□□ -0.55
GTF3A-201ENST00000381140 C6orf99Q4VX62 202 aa11.65□□□□□ -0.55
GTF3A-201ENST00000381140 PRR26Q8N8Z3 221 aa11.65□□□□□ -0.55
GTF3A-201ENST00000381140 HERC1Q15751 4861 aa11.64□□□□□ -0.55
GTF3A-201ENST00000381140 ETDCA0A1B0GVM5 59 aa11.64□□□□□ -0.55
GTF3A-201ENST00000381140 H0YGX0 51 aa11.64□□□□□ -0.55
GTF3A-201ENST00000381140 KRTAP1-4P0C5Y4 121 aa11.64□□□□□ -0.55
GTF3A-201ENST00000381140 HIGD2AQ9BW72 106 aa11.64□□□□□ -0.55
GTF3A-201ENST00000381140 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
GTF3A-201ENST00000381140 TCL1BO95988 128 aa11.62□□□□□ -0.55
GTF3A-201ENST00000381140 SPRR1AP35321 89 aa11.62□□□□□ -0.55
GTF3A-201ENST00000381140 GTF2H5Q6ZYL4 71 aa11.62□□□□□ -0.55
GTF3A-201ENST00000381140 KRTAP10-8P60410 259 aa11.61□□□□□ -0.55
GTF3A-201ENST00000381140 LST1O00453 97 aa11.59□□□□□ -0.55
GTF3A-201ENST00000381140 ATXN8Q156A1 80 aa11.59□□□□□ -0.55
GTF3A-201ENST00000381140 CLEC2BQ92478 149 aa11.59□□□□□ -0.55
GTF3A-201ENST00000381140 KRTAP4-16G5E9R7 235 aaPredicted RBP11.58□□□□□ -0.56
GTF3A-201ENST00000381140 ELOF1P60002 83 aaKnown RBP11.58□□□□□ -0.56
GTF3A-201ENST00000381140 ANAPC11Q9NYG5 84 aa11.58□□□□□ -0.56
GTF3A-201ENST00000381140 COX7BP24311 80 aa11.57□□□□□ -0.56
GTF3A-201ENST00000381140 FAM218AQ96MZ4 157 aa11.57□□□□□ -0.56
GTF3A-201ENST00000381140 A0A1B0GX51 115 aa11.56□□□□□ -0.56
GTF3A-201ENST00000381140 UBE2V1Q13404 147 aa11.56□□□□□ -0.56
GTF3A-201ENST00000381140 TNXBP22105 4242 aa11.55□□□□□ -0.56
GTF3A-201ENST00000381140 B5MCH6 92 aa11.54□□□□□ -0.56
GTF3A-201ENST00000381140 H3BMG7 143 aa11.54□□□□□ -0.56
GTF3A-201ENST00000381140 TRACP01848 142 aa11.54□□□□□ -0.56
GTF3A-201ENST00000381140 LINC00575Q6W349 94 aa11.54□□□□□ -0.56
GTF3A-201ENST00000381140 SMCR5Q8TEV8 140 aa11.54□□□□□ -0.56
GTF3A-201ENST00000381140 A0A087X002 238 aa11.52□□□□□ -0.57
GTF3A-201ENST00000381140 Q6ZRX8 168 aa11.52□□□□□ -0.57
GTF3A-201ENST00000381140 CRYGAP11844 174 aa11.51□□□□□ -0.57
GTF3A-201ENST00000381140 SLC25A20O43772 301 aa11.49□□□□□ -0.57
GTF3A-201ENST00000381140 SNCGO76070 127 aa11.49□□□□□ -0.57
GTF3A-201ENST00000381140 hADV29S1A0JD25 119 aa11.48□□□□□ -0.57
GTF3A-201ENST00000381140 SPRR4Q96PI1 79 aa11.48□□□□□ -0.57
GTF3A-201ENST00000381140 Q9BRP9 147 aa11.48□□□□□ -0.57
GTF3A-201ENST00000381140 ZNF706Q9Y5V0 76 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms