RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 H3BUT2 72 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 ATOX1O00244 68 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 SPANXN1Q5VSR9 72 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 C2orf82Q6UX34 121 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 DYNLRB2Q8TF09 96 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 K7EIL1 84 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 IGHV3-30P01768 117 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 IGHV3-30-5P0DP03 117 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 Q6ZTI0 123 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 CAMK2N2Q96S95 79 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 A0A0J9YWU9 116 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 A0A0J9YY99 117 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 IGKV3-20P01619 116 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 ACANP16112 2415 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 A0A096LPF7 62 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 A0A0B4J2C4 111 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 LELP1Q5T871 98 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 NIPBLQ6KC79 2804 aaeCLIP2.46□□□□□ -2.02
MCF2-203ENST00000370576 HERC2O95714 4834 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 Q6ZTC4 211 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 COPS9Q8WXC6 57 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 RMI2Q96E14 147 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 WFDC10AQ9H1F0 79 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 ABCA1O95477 2261 aa2.46□□□□□ -2.02
MCF2-203ENST00000370576 KRTAP17-1Q9BYP8 105 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 PRO0255Q9UI72 69 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 MYMXA0A1B0GTQ4 84 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 COX17Q14061 63 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 LINC01556Q5JQF7 62 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 Q5VV11 94 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 CAMK2N1Q7Z7J9 78 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 Q8N377 158 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 IGHV3-73A0A0B4J1V6 119 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 RTL8CO15255 209 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 Q5W150 140 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 Q6ZRN7 208 aaPredicted RBP2.45□□□□□ -2.02
MCF2-203ENST00000370576 OBSCN-AS1Q96MR7 158 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 MTORP42345 2549 aa2.45□□□□□ -2.02
MCF2-203ENST00000370576 TNXBP22105 4242 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 TRBV25-1A0A075B6N4 114 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 Q8IZM0 81 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 CLEC2BQ92478 149 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 TRAV13-2A0A0B4J235 113 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 BCE1O60756 84 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 CIRBPQ14011 172 aaKnown RBP2.44□□□□□ -2.02
MCF2-203ENST00000370576 ROS1P08922 2347 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 IGHV3-64A0A075B6Q5 118 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 TMSB15BA0A087X1C1 80 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 RPL39P62891 51 aaKnown RBP2.44□□□□□ -2.02
MCF2-203ENST00000370576 COX6A2Q02221 97 aa2.44□□□□□ -2.02
MCF2-203ENST00000370576 APLNQ9ULZ1 77 aa2.43□□□□□ -2.02
MCF2-203ENST00000370576 C22orf24Q9Y442 160 aa2.43□□□□□ -2.02
MCF2-203ENST00000370576 HYDINQ4G0P3 5121 aa2.43□□□□□ -2.02
MCF2-203ENST00000370576 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.43□□□□□ -2.02
MCF2-203ENST00000370576 S100A4P26447 101 aaKnown RBP2.43□□□□□ -2.02
MCF2-203ENST00000370576 MOBPQ13875 183 aa2.43□□□□□ -2.02
MCF2-203ENST00000370576 ENHOQ6UWT2 76 aa2.43□□□□□ -2.02
MCF2-203ENST00000370576 SCGB3A1Q96QR1 104 aa2.43□□□□□ -2.02
MCF2-203ENST00000370576 CSPG4Q6UVK1 2322 aa2.43□□□□□ -2.02
MCF2-203ENST00000370576 RPL36ALQ969Q0 106 aaKnown RBP2.43□□□□□ -2.02
MCF2-203ENST00000370576 LINC00959A0A1B0GUT2 108 aa2.42□□□□□ -2.02
MCF2-203ENST00000370576 SPART-AS1P0CW21 52 aa2.42□□□□□ -2.02
MCF2-203ENST00000370576 MIAQ16674 131 aa2.42□□□□□ -2.02
MCF2-203ENST00000370576 NOP10Q9NPE3 64 aaKnown RBP2.42□□□□□ -2.02
MCF2-203ENST00000370576 XCL1P47992 114 aa2.42□□□□□ -2.02
MCF2-203ENST00000370576 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 MAP1AP78559 2803 aaPredicted RBP2.41□□□□□ -2.02
MCF2-203ENST00000370576 IGLV4-60A0A075B6I1 120 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 TRBV30A0A0K0K1B3 111 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 NANOS2P60321 138 aaKnown RBP2.41□□□□□ -2.02
MCF2-203ENST00000370576 KRTDAPP60985 99 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 CNBPP62633 177 aaKnown RBP2.41□□□□□ -2.02
MCF2-203ENST00000370576 UBE2WQ96B02 151 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 FAT1Q14517 4588 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 PKD1L1Q8TDX9 2849 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 SONP18583 2426 aaKnown RBP2.41□□□□□ -2.02
MCF2-203ENST00000370576 SPRR1AP35321 89 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 FXYD7P58549 80 aa2.41□□□□□ -2.02
MCF2-203ENST00000370576 TRBV10-2A0A0K0K1G8 114 aa2.4□□□□□ -2.02
MCF2-203ENST00000370576 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.02
MCF2-203ENST00000370576 ZNF56Q15929 161 aa2.4□□□□□ -2.03
MCF2-203ENST00000370576 PLAC8Q9NZF1 115 aa2.4□□□□□ -2.03
MCF2-203ENST00000370576 EPPK1P58107 5090 aaKnown RBP2.4□□□□□ -2.03
MCF2-203ENST00000370576 CFC1P0CG37 223 aa2.4□□□□□ -2.03
MCF2-203ENST00000370576 CDC42SE1Q9NRR8 79 aa2.4□□□□□ -2.03
MCF2-203ENST00000370576 ICOSQ9Y6W8 199 aa2.4□□□□□ -2.03
MCF2-203ENST00000370576 JMJD1CQ15652 2540 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 TLN2Q9Y4G6 2542 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 IGKV2-28A0A075B6P5 120 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 TRAV10A0A0B4J240 114 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 IGKV2D-28P01615 120 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 KRTAP7-1Q8IUC3 87 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 TRGV1A0A0A0MS02 117 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 LRCOL1A6NCL2 159 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 IGLV6-57P01721 117 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 RPL28P46779 137 aaKnown RBP2.39□□□□□ -2.03
MCF2-203ENST00000370576 ESRGQ1W209 222 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms