RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
FN1-204ENST00000356005 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
FN1-204ENST00000356005 TLX1NBP0CAT3 122 aa7.5□□□□□ -1.21
FN1-204ENST00000356005 KCNQ1DNQ9H478 68 aa7.5□□□□□ -1.21
FN1-204ENST00000356005 VPREB1P12018 145 aa7.5□□□□□ -1.21
FN1-204ENST00000356005 A8MWP4 228 aa7.5□□□□□ -1.21
FN1-204ENST00000356005 KRTAP10-3P60369 221 aa7.5□□□□□ -1.21
FN1-204ENST00000356005 SMIM29Q86T20 159 aa7.5□□□□□ -1.21
FN1-204ENST00000356005 LOC101927531A0A1B0GV80 90 aa7.49□□□□□ -1.21
FN1-204ENST00000356005 ITPR2Q14571 2701 aa7.48□□□□□ -1.21
FN1-204ENST00000356005 FAM168BA1KXE4 195 aa7.48□□□□□ -1.21
FN1-204ENST00000356005 IGLV1-50A0A075B6I6 118 aa7.48□□□□□ -1.21
FN1-204ENST00000356005 Q6ZQT0 140 aa7.48□□□□□ -1.21
FN1-204ENST00000356005 APLNQ9ULZ1 77 aa7.48□□□□□ -1.21
FN1-204ENST00000356005 CHD6Q8TD26 2715 aa7.47□□□□□ -1.21
FN1-204ENST00000356005 A0A087WVE0 104 aa7.47□□□□□ -1.21
FN1-204ENST00000356005 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
FN1-204ENST00000356005 ZNF575Q86XF7 245 aa7.47□□□□□ -1.21
FN1-204ENST00000356005 Q9UF83 564 aa7.46□□□□□ -1.21
FN1-204ENST00000356005 LINC00612Q8N6U2 182 aa7.46□□□□□ -1.22
FN1-204ENST00000356005 LAMA2P24043 3122 aaKnown RBP7.46□□□□□ -1.22
FN1-204ENST00000356005 CNBPP62633 177 aaKnown RBP7.46□□□□□ -1.22
FN1-204ENST00000356005 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
FN1-204ENST00000356005 CCDC179H3BU77 68 aa7.45□□□□□ -1.22
FN1-204ENST00000356005 MRPL34Q9BQ48 92 aaKnown RBP7.45□□□□□ -1.22
FN1-204ENST00000356005 SMR3BP02814 79 aaPredicted RBP7.44□□□□□ -1.22
FN1-204ENST00000356005 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
FN1-204ENST00000356005 UNC79Q9P2D8 2635 aa7.44□□□□□ -1.22
FN1-204ENST00000356005 PMAIP1Q13794 54 aa7.44□□□□□ -1.22
FN1-204ENST00000356005 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
FN1-204ENST00000356005 ZNF292O60281 2723 aa7.44□□□□□ -1.22
FN1-204ENST00000356005 SERTAD4-AS1Q5TG53 156 aa7.44□□□□□ -1.22
FN1-204ENST00000356005 TEP1Q99973 2627 aaKnown RBP7.44□□□□□ -1.22
FN1-204ENST00000356005 CFAP54Q96N23 3096 aa7.43□□□□□ -1.22
FN1-204ENST00000356005 SOSTDC1Q6X4U4 206 aa7.43□□□□□ -1.22
FN1-204ENST00000356005 SETXQ7Z333 2677 aaKnown RBP7.43□□□□□ -1.22
FN1-204ENST00000356005 KRTAP1-1Q07627 177 aa7.42□□□□□ -1.22
FN1-204ENST00000356005 CASC10Q5T4H9 136 aa7.42□□□□□ -1.22
FN1-204ENST00000356005 GIG44P09565 113 aaPredicted RBP7.41□□□□□ -1.22
FN1-204ENST00000356005 PSORS1C2Q9UIG4 136 aa7.41□□□□□ -1.22
FN1-204ENST00000356005 MKI67P46013 3256 aaKnown RBP7.4□□□□□ -1.22
FN1-204ENST00000356005 MGAQ8IWI9 3026 aa7.4□□□□□ -1.22
FN1-204ENST00000356005 PSPHP1O15172 72 aa7.39□□□□□ -1.23
FN1-204ENST00000356005 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
FN1-204ENST00000356005 NBEAL1Q6ZS30 2694 aa7.38□□□□□ -1.23
FN1-204ENST00000356005 FAM218AQ96MZ4 157 aa7.37□□□□□ -1.23
FN1-204ENST00000356005 A0A1B0GVX0 72 aa7.36□□□□□ -1.23
FN1-204ENST00000356005 WIPF1O43516 503 aa7.36□□□□□ -1.23
FN1-204ENST00000356005 PRUNE2Q8WUY3 3088 aa7.36□□□□□ -1.23
FN1-204ENST00000356005 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
FN1-204ENST00000356005 IGLV5-37A0A075B6J1 123 aa7.35□□□□□ -1.23
FN1-204ENST00000356005 C9orf129Q5T035 196 aaKnown RBP7.34□□□□□ -1.23
FN1-204ENST00000356005 IGFL1Q6UW32 110 aa7.34□□□□□ -1.23
FN1-204ENST00000356005 C1orf195Q5TG92 126 aa7.34□□□□□ -1.23
FN1-204ENST00000356005 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
FN1-204ENST00000356005 RANBP2P49792 3224 aaKnown RBP7.32□□□□□ -1.24
FN1-204ENST00000356005 SPRR4Q96PI1 79 aa7.32□□□□□ -1.24
FN1-204ENST00000356005 A0A0C4DFX4 3053 aa7.32□□□□□ -1.24
FN1-204ENST00000356005 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
FN1-204ENST00000356005 DSCR10P59022 87 aa7.31□□□□□ -1.24
FN1-204ENST00000356005 C8orf17Q9NRJ1 99 aa7.31□□□□□ -1.24
FN1-204ENST00000356005 CD164Q04900 197 aa7.3□□□□□ -1.24
FN1-204ENST00000356005 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
FN1-204ENST00000356005 XIRP2A4UGR9 3374 aa7.3□□□□□ -1.24
FN1-204ENST00000356005 LAMA3Q16787 3333 aa7.29□□□□□ -1.24
FN1-204ENST00000356005 K7EQZ3 153 aa7.29□□□□□ -1.24
FN1-204ENST00000356005 Q8N377 158 aa7.29□□□□□ -1.24
FN1-204ENST00000356005 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
FN1-204ENST00000356005 Q6ZSA8 131 aa7.28□□□□□ -1.24
FN1-204ENST00000356005 TNP2Q05952 138 aa7.28□□□□□ -1.24
FN1-204ENST00000356005 A0A1W2PNN7 141 aa7.27□□□□□ -1.25
FN1-204ENST00000356005 VPS13AQ96RL7 3174 aa7.27□□□□□ -1.25
FN1-204ENST00000356005 LITAFQ99732 161 aa7.27□□□□□ -1.25
FN1-204ENST00000356005 FAM229BQ4G0N7 80 aa7.27□□□□□ -1.25
FN1-204ENST00000356005 HTTP42858 3142 aa7.25□□□□□ -1.25
FN1-204ENST00000356005 IGLV7-46A0A075B6I9 117 aa7.25□□□□□ -1.25
FN1-204ENST00000356005 CHD9Q3L8U1 2897 aa7.24□□□□□ -1.25
FN1-204ENST00000356005 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
FN1-204ENST00000356005 DSPP15924 2871 aaKnown RBP7.22□□□□□ -1.25
FN1-204ENST00000356005 M0R2T5 61 aa7.22□□□□□ -1.25
FN1-204ENST00000356005 UQCR11O14957 56 aa7.21□□□□□ -1.25
FN1-204ENST00000356005 LINC01600Q96MT4 127 aa7.21□□□□□ -1.25
FN1-204ENST00000356005 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.26
FN1-204ENST00000356005 WDFY4Q6ZS81 3184 aa7.2□□□□□ -1.26
FN1-204ENST00000356005 ANAPC11Q9NYG5 84 aa7.19□□□□□ -1.26
FN1-204ENST00000356005 IGSF10Q6WRI0 2623 aa7.18□□□□□ -1.26
FN1-204ENST00000356005 GCN1Q92616 2671 aaKnown RBP7.18□□□□□ -1.26
FN1-204ENST00000356005 SMCPP49901 116 aaPredicted RBP7.18□□□□□ -1.26
FN1-204ENST00000356005 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
FN1-204ENST00000356005 BRCA2P51587 3418 aa7.17□□□□□ -1.26
FN1-204ENST00000356005 PRO0461Q9UI25 63 aa7.17□□□□□ -1.26
FN1-204ENST00000356005 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
FN1-204ENST00000356005 COA5Q86WW8 74 aa7.17□□□□□ -1.26
FN1-204ENST00000356005 TRIOO75962 3097 aa7.16□□□□□ -1.26
FN1-204ENST00000356005 CYP4F30PQ9H0H9 118 aa7.16□□□□□ -1.26
FN1-204ENST00000356005 LCE6AA0A183 80 aa7.15□□□□□ -1.27
FN1-204ENST00000356005 PLAC8Q9NZF1 115 aa7.15□□□□□ -1.27
FN1-204ENST00000356005 A8MUN3 132 aa7.14□□□□□ -1.27
FN1-204ENST00000356005 FRYLO94915 3013 aa7.14□□□□□ -1.27
FN1-204ENST00000356005 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms