RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
FGD6-201ENST00000343958 LINC00336Q6ZUF6 198 aa5.49□□□□□ -1.53
FGD6-201ENST00000343958 IGLV5-48A0A075B6I7 105 aa5.49□□□□□ -1.53
FGD6-201ENST00000343958 IGLV7-43P04211 117 aa5.49□□□□□ -1.53
FGD6-201ENST00000343958 ACACBO00763 2458 aa5.49□□□□□ -1.53
FGD6-201ENST00000343958 NOTCH3Q9UM47 2321 aa5.48□□□□□ -1.53
FGD6-201ENST00000343958 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
FGD6-201ENST00000343958 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
FGD6-201ENST00000343958 ATRXP46100 2492 aa5.47□□□□□ -1.53
FGD6-201ENST00000343958 USP34Q70CQ2 3546 aa5.47□□□□□ -1.53
FGD6-201ENST00000343958 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.53
FGD6-201ENST00000343958 SSBP3-AS1Q7Z2R9 100 aa5.46□□□□□ -1.54
FGD6-201ENST00000343958 C5orf42Q9H799 3197 aa5.46□□□□□ -1.54
FGD6-201ENST00000343958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.46□□□□□ -1.54
FGD6-201ENST00000343958 OCR1Q9BZK8 76 aa5.44□□□□□ -1.54
FGD6-201ENST00000343958 TNP2Q05952 138 aa5.43□□□□□ -1.54
FGD6-201ENST00000343958 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
FGD6-201ENST00000343958 NOTCH2Q04721 2471 aa5.42□□□□□ -1.54
FGD6-201ENST00000343958 CYP4F30PQ9H0H9 118 aa5.41□□□□□ -1.54
FGD6-201ENST00000343958 UNC80Q8N2C7 3258 aa5.41□□□□□ -1.54
FGD6-201ENST00000343958 HTTP42858 3142 aa5.4□□□□□ -1.54
FGD6-201ENST00000343958 KRTAP26-1Q6PEX3 210 aa5.4□□□□□ -1.54
FGD6-201ENST00000343958 AGRNO00468 2067 aa5.4□□□□□ -1.54
FGD6-201ENST00000343958 SORL1Q92673 2214 aa5.39□□□□□ -1.55
FGD6-201ENST00000343958 Q8N1X5 172 aa5.39□□□□□ -1.55
FGD6-201ENST00000343958 CELSR3Q9NYQ7 3312 aa5.38□□□□□ -1.55
FGD6-201ENST00000343958 CEP350Q5VT06 3117 aa5.38□□□□□ -1.55
FGD6-201ENST00000343958 CHD7Q9P2D1 2997 aa5.38□□□□□ -1.55
FGD6-201ENST00000343958 FAM229BQ4G0N7 80 aa5.38□□□□□ -1.55
FGD6-201ENST00000343958 WIPF1O43516 503 aa5.37□□□□□ -1.55
FGD6-201ENST00000343958 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
FGD6-201ENST00000343958 SPRR1AP35321 89 aa5.37□□□□□ -1.55
FGD6-201ENST00000343958 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
FGD6-201ENST00000343958 PTPN13Q12923 2485 aa5.36□□□□□ -1.55
FGD6-201ENST00000343958 PRR26Q8N8Z3 221 aa5.36□□□□□ -1.55
FGD6-201ENST00000343958 UQCR11O14957 56 aa5.36□□□□□ -1.55
FGD6-201ENST00000343958 CCDC168Q8NDH2 2452 aa5.35□□□□□ -1.55
FGD6-201ENST00000343958 CACNA1AO00555 2505 aa5.35□□□□□ -1.55
FGD6-201ENST00000343958 MMP24-AS1A0A0U1RRL7 71 aa5.35□□□□□ -1.55
FGD6-201ENST00000343958 TLN1Q9Y490 2541 aaKnown RBP5.35□□□□□ -1.55
FGD6-201ENST00000343958 Q5XG85 94 aa5.35□□□□□ -1.55
FGD6-201ENST00000343958 C2CD3Q4AC94 2353 aa5.35□□□□□ -1.55
FGD6-201ENST00000343958 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
FGD6-201ENST00000343958 MUC4Q99102 2169 aa5.34□□□□□ -1.55
FGD6-201ENST00000343958 ZNF462Q96JM2 2506 aa5.34□□□□□ -1.55
FGD6-201ENST00000343958 CHD9Q3L8U1 2897 aa5.33□□□□□ -1.56
FGD6-201ENST00000343958 VCANP13611 3396 aa5.31□□□□□ -1.56
FGD6-201ENST00000343958 SONP18583 2426 aaKnown RBP5.31□□□□□ -1.56
FGD6-201ENST00000343958 Q8N9P0 234 aaPredicted RBP5.3□□□□□ -1.56
FGD6-201ENST00000343958 ABCA2Q9BZC7 2435 aa5.3□□□□□ -1.56
FGD6-201ENST00000343958 OXTP01178 125 aa5.3□□□□□ -1.56
FGD6-201ENST00000343958 HRES1P13985 223 aa5.3□□□□□ -1.56
FGD6-201ENST00000343958 SPEGQ15772 3267 aa5.3□□□□□ -1.56
FGD6-201ENST00000343958 RANBP2P49792 3224 aaKnown RBP5.3□□□□□ -1.56
FGD6-201ENST00000343958 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
FGD6-201ENST00000343958 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
FGD6-201ENST00000343958 PLAC8Q9NZF1 115 aa5.29□□□□□ -1.56
FGD6-201ENST00000343958 J3QL48 77 aa5.28□□□□□ -1.56
FGD6-201ENST00000343958 Q1T7F1 81 aa5.28□□□□□ -1.56
FGD6-201ENST00000343958 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
FGD6-201ENST00000343958 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
FGD6-201ENST00000343958 PANO1I0J062 215 aa5.27□□□□□ -1.57
FGD6-201ENST00000343958 SPRR1BP22528 89 aa5.27□□□□□ -1.57
FGD6-201ENST00000343958 CD164Q04900 197 aa5.26□□□□□ -1.57
FGD6-201ENST00000343958 LINC00472Q9H8W2 130 aa5.26□□□□□ -1.57
FGD6-201ENST00000343958 A0A0D9SG42 100 aa5.26□□□□□ -1.57
FGD6-201ENST00000343958 MYO15AQ9UKN7 3530 aa5.26□□□□□ -1.57
FGD6-201ENST00000343958 CEP295Q9C0D2 2601 aa5.25□□□□□ -1.57
FGD6-201ENST00000343958 KTN1-AS1Q86SY8 53 aa5.25□□□□□ -1.57
FGD6-201ENST00000343958 EYSQ5T1H1 3165 aa5.24□□□□□ -1.57
FGD6-201ENST00000343958 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.57
FGD6-201ENST00000343958 COX6B2Q6YFQ2 88 aa5.21□□□□□ -1.57
FGD6-201ENST00000343958 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
FGD6-201ENST00000343958 Q5W150 140 aa5.21□□□□□ -1.58
FGD6-201ENST00000343958 LCA10Q71F78 164 aa5.21□□□□□ -1.58
FGD6-201ENST00000343958 DOPEY1Q5JWR5 2465 aa5.21□□□□□ -1.58
FGD6-201ENST00000343958 KRTAP10-2P60368 255 aa5.21□□□□□ -1.58
FGD6-201ENST00000343958 COL6A3P12111 3177 aa5.21□□□□□ -1.58
FGD6-201ENST00000343958 WDR87Q6ZQQ6 2873 aa5.2□□□□□ -1.58
FGD6-201ENST00000343958 KRTAP11-1Q8IUC1 163 aa5.2□□□□□ -1.58
FGD6-201ENST00000343958 KRTAP10-1P60331 282 aa5.19□□□□□ -1.58
FGD6-201ENST00000343958 Q75L30 129 aa5.19□□□□□ -1.58
FGD6-201ENST00000343958 LINC01554Q52M75 96 aa5.19□□□□□ -1.58
FGD6-201ENST00000343958 Q5VV11 94 aa5.19□□□□□ -1.58
FGD6-201ENST00000343958 KRTAP7-1Q8IUC3 87 aa5.19□□□□□ -1.58
FGD6-201ENST00000343958 ZCCHC13Q8WW36 166 aaKnown RBP5.18□□□□□ -1.58
FGD6-201ENST00000343958 POLQO75417 2590 aa5.18□□□□□ -1.58
FGD6-201ENST00000343958 SPINK7P58062 85 aa5.18□□□□□ -1.58
FGD6-201ENST00000343958 PIEZO1Q92508 2521 aa5.17□□□□□ -1.58
FGD6-201ENST00000343958 USP9XQ93008 2570 aaPredicted RBP5.17□□□□□ -1.58
FGD6-201ENST00000343958 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
FGD6-201ENST00000343958 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.58
FGD6-201ENST00000343958 CRIPTQ9P021 101 aa5.15□□□□□ -1.59
FGD6-201ENST00000343958 ANKRD11Q6UB99 2663 aaPredicted RBP5.14□□□□□ -1.59
FGD6-201ENST00000343958 FN1P02751 2386 aaKnown RBP5.14□□□□□ -1.59
FGD6-201ENST00000343958 ABCA12Q86UK0 2595 aa5.14□□□□□ -1.59
FGD6-201ENST00000343958 KRTAP29-1A8MX34 341 aaPredicted RBP5.14□□□□□ -1.59
FGD6-201ENST00000343958 SPTBN5Q9NRC6 3674 aaKnown RBP5.14□□□□□ -1.59
FGD6-201ENST00000343958 LINC00483Q53H64 154 aa5.14□□□□□ -1.59
FGD6-201ENST00000343958 PKD1L2Q7Z442 2459 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms