RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 KIAA0087Q14695 138 aa4.2□□□□□ -1.74
CSTF3-201ENST00000323959 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
CSTF3-201ENST00000323959 FAM19A5Q7Z5A7 132 aaPredicted RBP4.2□□□□□ -1.74
CSTF3-201ENST00000323959 A4D1N5 150 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 CIRBPQ14011 172 aaKnown RBP4.19□□□□□ -1.74
CSTF3-201ENST00000323959 UBE2WQ96B02 151 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 LINC00526Q96FQ7 95 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 PRSS2P07478 247 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 PRR4Q16378 134 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 LINC01620Q4KN68 170 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 ENHOQ6UWT2 76 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 USH2AO75445 5202 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 TRAV8-3A0A0A6YYJ7 113 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 ACYP1P07311 99 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 RNASE13Q5GAN3 156 aaKnown RBP4.19□□□□□ -1.74
CSTF3-201ENST00000323959 C2orf48Q96LS8 159 aa4.19□□□□□ -1.74
CSTF3-201ENST00000323959 TRAV13-1A0A0B4J241 112 aa4.18□□□□□ -1.74
CSTF3-201ENST00000323959 H3BT86 120 aa4.18□□□□□ -1.74
CSTF3-201ENST00000323959 COX7A2LO14548 114 aa4.18□□□□□ -1.74
CSTF3-201ENST00000323959 CHCHD10Q8WYQ3 142 aaPredicted RBP4.18□□□□□ -1.74
CSTF3-201ENST00000323959 IGHV3-33P01772 117 aa4.18□□□□□ -1.74
CSTF3-201ENST00000323959 LINC00269Q8N2A0 174 aa4.18□□□□□ -1.74
CSTF3-201ENST00000323959 LOC107984640A0A0U1RRK4 108 aa4.17□□□□□ -1.74
CSTF3-201ENST00000323959 TEX49A0A1B0GTD5 131 aa4.17□□□□□ -1.74
CSTF3-201ENST00000323959 NDUFC2O95298 119 aa4.17□□□□□ -1.74
CSTF3-201ENST00000323959 TRBV30A0A0K0K1B3 111 aa4.17□□□□□ -1.74
CSTF3-201ENST00000323959 SPINK6Q6UWN8 80 aa4.17□□□□□ -1.74
CSTF3-201ENST00000323959 FAM236AA0A1B0GUQ0 79 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 FAM236BA0A1B0GV22 79 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
CSTF3-201ENST00000323959 C2orf82Q6UX34 121 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 LINC00308Q8TCZ7 52 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 ANGP03950 147 aaKnown RBP4.16□□□□□ -1.74
CSTF3-201ENST00000323959 CRYGAP11844 174 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 ADAMTSL4-AS1Q5T5F5 129 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 GAGE2AQ6NT46 116 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 MUSTN1Q8IVN3 82 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 RMI2Q96E14 147 aa4.16□□□□□ -1.74
CSTF3-201ENST00000323959 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
CSTF3-201ENST00000323959 COX7CP15954 63 aa4.15□□□□□ -1.74
CSTF3-201ENST00000323959 PSORS1C2Q9UIG4 136 aa4.15□□□□□ -1.74
CSTF3-201ENST00000323959 TLX1NBP0CAT3 122 aa4.15□□□□□ -1.75
CSTF3-201ENST00000323959 LINC00643Q86TS7 51 aa4.15□□□□□ -1.75
CSTF3-201ENST00000323959 WFDC10BQ8IUB3 73 aa4.15□□□□□ -1.75
CSTF3-201ENST00000323959 EIF4EBP3O60516 100 aaPredicted RBP4.14□□□□□ -1.75
CSTF3-201ENST00000323959 CRPP02741 224 aa4.14□□□□□ -1.75
CSTF3-201ENST00000323959 COX6CP09669 75 aa4.14□□□□□ -1.75
CSTF3-201ENST00000323959 Q1RN00 199 aa4.14□□□□□ -1.75
CSTF3-201ENST00000323959 TRACP01848 142 aa4.14□□□□□ -1.75
CSTF3-201ENST00000323959 TMEM258P61165 79 aa4.14□□□□□ -1.75
CSTF3-201ENST00000323959 CNBPP62633 177 aaKnown RBP4.14□□□□□ -1.75
CSTF3-201ENST00000323959 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
CSTF3-201ENST00000323959 TRAV13-2A0A0B4J235 113 aa4.13□□□□□ -1.75
CSTF3-201ENST00000323959 ATOX1O00244 68 aa4.13□□□□□ -1.75
CSTF3-201ENST00000323959 XCL1P47992 114 aa4.13□□□□□ -1.75
CSTF3-201ENST00000323959 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
CSTF3-201ENST00000323959 KLK12Q9UKR0 248 aa4.13□□□□□ -1.75
CSTF3-201ENST00000323959 C6orf226Q5I0X4 101 aa4.12□□□□□ -1.75
CSTF3-201ENST00000323959 SOSTDC1Q6X4U4 206 aa4.12□□□□□ -1.75
CSTF3-201ENST00000323959 C5orf38Q86SI9 138 aa4.12□□□□□ -1.75
CSTF3-201ENST00000323959 C15orf56Q8N910 161 aa4.12□□□□□ -1.75
CSTF3-201ENST00000323959 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
CSTF3-201ENST00000323959 MALP21145 153 aa4.12□□□□□ -1.75
CSTF3-201ENST00000323959 DPH3Q96FX2 82 aa4.12□□□□□ -1.75
CSTF3-201ENST00000323959 LINC00846Q9NV44 126 aa4.12□□□□□ -1.75
CSTF3-201ENST00000323959 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.11□□□□□ -1.75
CSTF3-201ENST00000323959 H7C2G1 150 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 TRIAP1O43715 76 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 RPL28P46779 137 aaKnown RBP4.11□□□□□ -1.75
CSTF3-201ENST00000323959 SPAG11BQ08648 103 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 Q8N3U1 123 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 C1orf43Q9BWL3 253 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 LST1O00453 97 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 SDIM1Q6ZPB5 146 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 PKIGQ9Y2B9 76 aa4.11□□□□□ -1.75
CSTF3-201ENST00000323959 IGLV5-37A0A075B6J1 123 aa4.1□□□□□ -1.75
CSTF3-201ENST00000323959 C7orf33Q8WU49 177 aa4.1□□□□□ -1.75
CSTF3-201ENST00000323959 HIST1H4AP62805 103 aaKnown RBP4.1□□□□□ -1.75
CSTF3-201ENST00000323959 MIR7-3HGQ8N6C7 128 aa4.1□□□□□ -1.75
CSTF3-201ENST00000323959 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
CSTF3-201ENST00000323959 IGKV2-28A0A075B6P5 120 aa4.09□□□□□ -1.75
CSTF3-201ENST00000323959 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
CSTF3-201ENST00000323959 IGKV2D-28P01615 120 aa4.09□□□□□ -1.75
CSTF3-201ENST00000323959 hADV29S1A0JD25 119 aa4.09□□□□□ -1.75
CSTF3-201ENST00000323959 PRR3P79522 188 aaKnown RBP4.09□□□□□ -1.75
CSTF3-201ENST00000323959 C14orf177Q52M58 125 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 SND1-IT1Q9HBX3 110 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 DAND5Q8N907 189 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 LINC00167Q96N53 147 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 NDUFC2-KCTD14E9PQ53 114 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 H0YGX0 51 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 C4orf26Q17RF5 130 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 Q5XG85 94 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 CLPSL2Q6UWE3 100 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
CSTF3-201ENST00000323959 IGKV3OR2-268A0A0C4DH90 116 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 H3BQ85 93 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms