RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 COL5A1-AS1Q5SY13 56 aa10.11□□□□□ -0.79
NPM1-201ENST00000296930 VPREB1P12018 145 aa10.1□□□□□ -0.79
NPM1-201ENST00000296930 LINC00337Q8N6G1 96 aa10.1□□□□□ -0.79
NPM1-201ENST00000296930 RAB37Q96AX2 223 aa10.09□□□□□ -0.79
NPM1-201ENST00000296930 TNXBP22105 4242 aa10.09□□□□□ -0.79
NPM1-201ENST00000296930 PRO1854Q9UHT4 67 aa10.09□□□□□ -0.79
NPM1-201ENST00000296930 UBR4Q5T4S7 5183 aa10.08□□□□□ -0.8
NPM1-201ENST00000296930 FAM168BA1KXE4 195 aa10.08□□□□□ -0.8
NPM1-201ENST00000296930 TAX1BP3O14907 124 aa10.08□□□□□ -0.8
NPM1-201ENST00000296930 NCR3O14931 201 aa10.08□□□□□ -0.8
NPM1-201ENST00000296930 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
NPM1-201ENST00000296930 LBHQ53QV2 105 aaPredicted RBP10.07□□□□□ -0.8
NPM1-201ENST00000296930 TRAV13-2A0A0B4J235 113 aa10.06□□□□□ -0.8
NPM1-201ENST00000296930 RPL13AP40429 203 aaKnown RBP10.06□□□□□ -0.8
NPM1-201ENST00000296930 PSORS1C2Q9UIG4 136 aa10.06□□□□□ -0.8
NPM1-201ENST00000296930 TRBV10-2A0A0K0K1G8 114 aa10.05□□□□□ -0.8
NPM1-201ENST00000296930 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
NPM1-201ENST00000296930 IGLV5-37A0A075B6J1 123 aa10.04□□□□□ -0.8
NPM1-201ENST00000296930 KRTAP10-8P60410 259 aa10.04□□□□□ -0.8
NPM1-201ENST00000296930 PHF5AQ7RTV0 110 aaKnown RBP10.04□□□□□ -0.8
NPM1-201ENST00000296930 TSPAN13O95857 204 aa10.03□□□□□ -0.8
NPM1-201ENST00000296930 FAM19A5Q7Z5A7 132 aaPredicted RBP10.03□□□□□ -0.8
NPM1-201ENST00000296930 H7C2G1 150 aa10.02□□□□□ -0.81
NPM1-201ENST00000296930 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.81
NPM1-201ENST00000296930 NAA38Q9BRA0 125 aaKnown RBP10.02□□□□□ -0.81
NPM1-201ENST00000296930 M0R378 163 aa10.01□□□□□ -0.81
NPM1-201ENST00000296930 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
NPM1-201ENST00000296930 NKAPP1Q8N9T2 125 aa10.01□□□□□ -0.81
NPM1-201ENST00000296930 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
NPM1-201ENST00000296930 IGLV6-57P01721 117 aa10.01□□□□□ -0.81
NPM1-201ENST00000296930 C22orf24Q9Y442 160 aa10.01□□□□□ -0.81
NPM1-201ENST00000296930 TMEM126AQ9H061 195 aa10□□□□□ -0.81
NPM1-201ENST00000296930 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
NPM1-201ENST00000296930 H3BUT2 72 aa9.99□□□□□ -0.81
NPM1-201ENST00000296930 Q1RN00 199 aa9.99□□□□□ -0.81
NPM1-201ENST00000296930 S100A7L2Q5SY68 101 aa9.99□□□□□ -0.81
NPM1-201ENST00000296930 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
NPM1-201ENST00000296930 M0QXV9 152 aa9.98□□□□□ -0.81
NPM1-201ENST00000296930 MRPL55Q7Z7F7 128 aaKnown RBP9.98□□□□□ -0.81
NPM1-201ENST00000296930 SMIM11BQ8TCY0 68 aa9.98□□□□□ -0.81
NPM1-201ENST00000296930 IGLV7-43P04211 117 aa9.96□□□□□ -0.81
NPM1-201ENST00000296930 DIRC1Q969H9 104 aa9.96□□□□□ -0.81
NPM1-201ENST00000296930 LINC00167Q96N53 147 aa9.96□□□□□ -0.81
NPM1-201ENST00000296930 TRIAP1O43715 76 aa9.96□□□□□ -0.82
NPM1-201ENST00000296930 RPL28P46779 137 aaKnown RBP9.96□□□□□ -0.82
NPM1-201ENST00000296930 LRP2P98164 4655 aa9.95□□□□□ -0.82
NPM1-201ENST00000296930 KRTAP11-1Q8IUC1 163 aa9.94□□□□□ -0.82
NPM1-201ENST00000296930 IGLV1-50A0A075B6I6 118 aa9.93□□□□□ -0.82
NPM1-201ENST00000296930 A0A1W2PPM0 123 aa9.93□□□□□ -0.82
NPM1-201ENST00000296930 RPL37AP8A6NKH3 93 aa9.93□□□□□ -0.82
NPM1-201ENST00000296930 PSMB2P49721 201 aa9.93□□□□□ -0.82
NPM1-201ENST00000296930 TRAV23DV6A0A075B6W5 121 aa9.93□□□□□ -0.82
NPM1-201ENST00000296930 UBE2BP63146 152 aa9.93□□□□□ -0.82
NPM1-201ENST00000296930 H0Y9J4 135 aa9.91□□□□□ -0.82
NPM1-201ENST00000296930 KCNQ1DNQ9H478 68 aa9.91□□□□□ -0.82
NPM1-201ENST00000296930 A0A1B0GV90 55 aa9.91□□□□□ -0.82
NPM1-201ENST00000296930 C6orf99Q4VX62 202 aa9.91□□□□□ -0.82
NPM1-201ENST00000296930 ZNF73O43830 326 aaPredicted RBP9.89□□□□□ -0.83
NPM1-201ENST00000296930 FABP2P12104 132 aa9.89□□□□□ -0.83
NPM1-201ENST00000296930 PRYO14603 147 aa9.88□□□□□ -0.83
NPM1-201ENST00000296930 CBY1Q9Y3M2 126 aa9.88□□□□□ -0.83
NPM1-201ENST00000296930 COX6CP09669 75 aa9.88□□□□□ -0.83
NPM1-201ENST00000296930 SCGB1C2P0DMR2 95 aa9.87□□□□□ -0.83
NPM1-201ENST00000296930 SPRR1AP35321 89 aa9.87□□□□□ -0.83
NPM1-201ENST00000296930 PRR26Q8N8Z3 221 aa9.87□□□□□ -0.83
NPM1-201ENST00000296930 LYRM7Q5U5X0 104 aa9.86□□□□□ -0.83
NPM1-201ENST00000296930 CLEC2BQ92478 149 aa9.86□□□□□ -0.83
NPM1-201ENST00000296930 KRTAP4-16G5E9R7 235 aaPredicted RBP9.85□□□□□ -0.83
NPM1-201ENST00000296930 TCL1BO95988 128 aa9.85□□□□□ -0.83
NPM1-201ENST00000296930 VAMP3Q15836 100 aa9.85□□□□□ -0.83
NPM1-201ENST00000296930 SPCS1Q9Y6A9 102 aa9.85□□□□□ -0.83
NPM1-201ENST00000296930 FAM218AQ96MZ4 157 aa9.84□□□□□ -0.83
NPM1-201ENST00000296930 H0YGX0 51 aa9.83□□□□□ -0.84
NPM1-201ENST00000296930 TRBV7-6A0A0J9YX20 115 aa9.83□□□□□ -0.84
NPM1-201ENST00000296930 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
NPM1-201ENST00000296930 ELOF1P60002 83 aaKnown RBP9.83□□□□□ -0.84
NPM1-201ENST00000296930 K7EP34 96 aa9.82□□□□□ -0.84
NPM1-201ENST00000296930 LORP23490 312 aaPredicted RBP9.82□□□□□ -0.84
NPM1-201ENST00000296930 TRBV20-1A0A075B6N2 111 aa9.81□□□□□ -0.84
NPM1-201ENST00000296930 COX7BP24311 80 aa9.81□□□□□ -0.84
NPM1-201ENST00000296930 LST1O00453 97 aa9.8□□□□□ -0.84
NPM1-201ENST00000296930 ZNF861PO60384 105 aa9.8□□□□□ -0.84
NPM1-201ENST00000296930 ETDCA0A1B0GVM5 59 aa9.79□□□□□ -0.84
NPM1-201ENST00000296930 B5MCH6 92 aa9.79□□□□□ -0.84
NPM1-201ENST00000296930 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
NPM1-201ENST00000296930 Q6ZRX8 168 aa9.79□□□□□ -0.84
NPM1-201ENST00000296930 RNF213Q63HN8 5207 aa9.79□□□□□ -0.84
NPM1-201ENST00000296930 H3BMG7 143 aa9.78□□□□□ -0.84
NPM1-201ENST00000296930 ATXN8Q156A1 80 aa9.78□□□□□ -0.84
NPM1-201ENST00000296930 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
NPM1-201ENST00000296930 GTF2H5Q6ZYL4 71 aa9.78□□□□□ -0.84
NPM1-201ENST00000296930 BCE1O60756 84 aa9.75□□□□□ -0.85
NPM1-201ENST00000296930 FAM19A1Q7Z5A9 133 aa9.75□□□□□ -0.85
NPM1-201ENST00000296930 Q9BRP9 147 aa9.75□□□□□ -0.85
NPM1-201ENST00000296930 A0A1B0GX51 115 aa9.75□□□□□ -0.85
NPM1-201ENST00000296930 TRACP01848 142 aa9.75□□□□□ -0.85
NPM1-201ENST00000296930 PRLHP81277 87 aa9.75□□□□□ -0.85
NPM1-201ENST00000296930 UBE2V1Q13404 147 aa9.74□□□□□ -0.85
NPM1-201ENST00000296930 hADV29S1A0JD25 119 aa9.73□□□□□ -0.85
NPM1-201ENST00000296930 KRTAP13-1Q8IUC0 172 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms