RNA–Protein interactions for RNA: ENST00000263726.3

LHX4-201, Transcript of LIM homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX4, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-201ENST00000263726 PTPN13Q12923 2485 aa7.2□□□□□ -1.26
LHX4-201ENST00000263726 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
LHX4-201ENST00000263726 NAV2Q8IVL1 2488 aa7.2□□□□□ -1.26
LHX4-201ENST00000263726 CFAP54Q96N23 3096 aa7.2□□□□□ -1.26
LHX4-201ENST00000263726 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
LHX4-201ENST00000263726 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
LHX4-201ENST00000263726 LINC00588Q9Y4M8 146 aa7.19□□□□□ -1.26
LHX4-201ENST00000263726 Q5VV11 94 aa7.18□□□□□ -1.26
LHX4-201ENST00000263726 C8orf17Q9NRJ1 99 aa7.18□□□□□ -1.26
LHX4-201ENST00000263726 ACACBO00763 2458 aa7.18□□□□□ -1.26
LHX4-201ENST00000263726 BDP1A6H8Y1 2624 aa7.18□□□□□ -1.26
LHX4-201ENST00000263726 IGLV5-37A0A075B6J1 123 aa7.18□□□□□ -1.26
LHX4-201ENST00000263726 MDFIQ99750 246 aa7.17□□□□□ -1.26
LHX4-201ENST00000263726 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
LHX4-201ENST00000263726 KRTAP10-3P60369 221 aa7.14□□□□□ -1.27
LHX4-201ENST00000263726 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
LHX4-201ENST00000263726 ANKRD11Q6UB99 2663 aaPredicted RBP7.13□□□□□ -1.27
LHX4-201ENST00000263726 TRIOO75962 3097 aa7.13□□□□□ -1.27
LHX4-201ENST00000263726 RANBP2P49792 3224 aaKnown RBP7.13□□□□□ -1.27
LHX4-201ENST00000263726 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
LHX4-201ENST00000263726 SPACA4Q8TDM5 124 aa7.12□□□□□ -1.27
LHX4-201ENST00000263726 CHTF8P0CG12 524 aa7.12□□□□□ -1.27
LHX4-201ENST00000263726 MYO9AB2RTY4 2548 aa7.12□□□□□ -1.27
LHX4-201ENST00000263726 FN1P02751 2386 aaKnown RBP7.11□□□□□ -1.27
LHX4-201ENST00000263726 UQCR11O14957 56 aa7.11□□□□□ -1.27
LHX4-201ENST00000263726 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
LHX4-201ENST00000263726 XIRP2A4UGR9 3374 aa7.1□□□□□ -1.27
LHX4-201ENST00000263726 LINC00313P59037 77 aa7.1□□□□□ -1.27
LHX4-201ENST00000263726 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
LHX4-201ENST00000263726 VCANP13611 3396 aa7.1□□□□□ -1.27
LHX4-201ENST00000263726 RTL8CO15255 209 aa7.09□□□□□ -1.27
LHX4-201ENST00000263726 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
LHX4-201ENST00000263726 SONP18583 2426 aaKnown RBP7.08□□□□□ -1.28
LHX4-201ENST00000263726 CASC10Q5T4H9 136 aa7.07□□□□□ -1.28
LHX4-201ENST00000263726 LAMA1P25391 3075 aa7.07□□□□□ -1.28
LHX4-201ENST00000263726 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
LHX4-201ENST00000263726 NBDYA0A0U1RRE5 68 aa7.06□□□□□ -1.28
LHX4-201ENST00000263726 SPRR1AP35321 89 aa7.06□□□□□ -1.28
LHX4-201ENST00000263726 SZT2Q5T011 3432 aa7.06□□□□□ -1.28
LHX4-201ENST00000263726 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
LHX4-201ENST00000263726 ZCCHC13Q8WW36 166 aaKnown RBP7.05□□□□□ -1.28
LHX4-201ENST00000263726 CEP295Q9C0D2 2601 aa7.05□□□□□ -1.28
LHX4-201ENST00000263726 KRTAP1-3Q8IUG1 177 aa7.04□□□□□ -1.28
LHX4-201ENST00000263726 ABCA2Q9BZC7 2435 aa7.04□□□□□ -1.28
LHX4-201ENST00000263726 USP9XQ93008 2570 aaPredicted RBP7.03□□□□□ -1.28
LHX4-201ENST00000263726 NCOR2Q9Y618 2525 aa7.02□□□□□ -1.29
LHX4-201ENST00000263726 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.29
LHX4-201ENST00000263726 MMP24-AS1A0A0U1RRL7 71 aa7.02□□□□□ -1.29
LHX4-201ENST00000263726 TNP2Q05952 138 aa7.02□□□□□ -1.29
LHX4-201ENST00000263726 KRTAP24-1Q3LI83 254 aa7.01□□□□□ -1.29
LHX4-201ENST00000263726 KRTAP10-11P60412 298 aa7.01□□□□□ -1.29
LHX4-201ENST00000263726 Q96NJ1 140 aa7.01□□□□□ -1.29
LHX4-201ENST00000263726 ANKRD17O75179 2603 aaKnown RBP7.01□□□□□ -1.29
LHX4-201ENST00000263726 CELSR3Q9NYQ7 3312 aa7□□□□□ -1.29
LHX4-201ENST00000263726 CCDC168Q8NDH2 2452 aa7□□□□□ -1.29
LHX4-201ENST00000263726 LCE6AA0A183 80 aa7□□□□□ -1.29
LHX4-201ENST00000263726 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
LHX4-201ENST00000263726 TLN2Q9Y4G6 2542 aa7□□□□□ -1.29
LHX4-201ENST00000263726 SPTBN5Q9NRC6 3674 aaKnown RBP7□□□□□ -1.29
LHX4-201ENST00000263726 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
LHX4-201ENST00000263726 HRES1P13985 223 aa6.98□□□□□ -1.29
LHX4-201ENST00000263726 SPINK7P58062 85 aa6.98□□□□□ -1.29
LHX4-201ENST00000263726 NOTCH2Q04721 2471 aa6.97□□□□□ -1.29
LHX4-201ENST00000263726 USP9YO00507 2555 aaPredicted RBP6.97□□□□□ -1.29
LHX4-201ENST00000263726 H3BS24 57 aa6.97□□□□□ -1.29
LHX4-201ENST00000263726 NBEAQ8NFP9 2946 aa6.96□□□□□ -1.3
LHX4-201ENST00000263726 LINC00472Q9H8W2 130 aa6.96□□□□□ -1.3
LHX4-201ENST00000263726 CACNA1AO00555 2505 aa6.96□□□□□ -1.3
LHX4-201ENST00000263726 LINC01554Q52M75 96 aa6.96□□□□□ -1.3
LHX4-201ENST00000263726 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
LHX4-201ENST00000263726 KRTAP1-1Q07627 177 aa6.95□□□□□ -1.3
LHX4-201ENST00000263726 VPS13AQ96RL7 3174 aa6.95□□□□□ -1.3
LHX4-201ENST00000263726 C9orf163Q8N9P6 203 aa6.95□□□□□ -1.3
LHX4-201ENST00000263726 DOPEY1Q5JWR5 2465 aa6.92□□□□□ -1.3
LHX4-201ENST00000263726 USP34Q70CQ2 3546 aa6.92□□□□□ -1.3
LHX4-201ENST00000263726 CR1P17927 2039 aa6.92□□□□□ -1.3
LHX4-201ENST00000263726 KRTAP4-16G5E9R7 235 aaPredicted RBP6.92□□□□□ -1.3
LHX4-201ENST00000263726 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
LHX4-201ENST00000263726 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
LHX4-201ENST00000263726 SPEGQ15772 3267 aa6.91□□□□□ -1.3
LHX4-201ENST00000263726 ZNF861PO60384 105 aa6.91□□□□□ -1.3
LHX4-201ENST00000263726 DSPP15924 2871 aaKnown RBP6.91□□□□□ -1.3
LHX4-201ENST00000263726 PRUNE2Q8WUY3 3088 aa6.91□□□□□ -1.3
LHX4-201ENST00000263726 ABCA12Q86UK0 2595 aa6.91□□□□□ -1.3
LHX4-201ENST00000263726 ANAPC11Q9NYG5 84 aa6.9□□□□□ -1.3
LHX4-201ENST00000263726 A6NN06 94 aa6.89□□□□□ -1.31
LHX4-201ENST00000263726 SPRR1BP22528 89 aa6.89□□□□□ -1.31
LHX4-201ENST00000263726 FRYQ5TBA9 3013 aa6.89□□□□□ -1.31
LHX4-201ENST00000263726 JMJD1CQ15652 2540 aa6.88□□□□□ -1.31
LHX4-201ENST00000263726 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
LHX4-201ENST00000263726 POLQO75417 2590 aa6.87□□□□□ -1.31
LHX4-201ENST00000263726 SETD2Q9BYW2 2564 aaPredicted RBP6.87□□□□□ -1.31
LHX4-201ENST00000263726 FRYLO94915 3013 aa6.87□□□□□ -1.31
LHX4-201ENST00000263726 SSBP3-AS1Q7Z2R9 100 aa6.87□□□□□ -1.31
LHX4-201ENST00000263726 FREM2Q5SZK8 3169 aa6.86□□□□□ -1.31
LHX4-201ENST00000263726 REV3LO60673 3130 aa6.85□□□□□ -1.31
LHX4-201ENST00000263726 MGAQ8IWI9 3026 aa6.85□□□□□ -1.31
LHX4-201ENST00000263726 PSORS1C2Q9UIG4 136 aa6.84□□□□□ -1.31
LHX4-201ENST00000263726 A8MU10 97 aa6.84□□□□□ -1.32
LHX4-201ENST00000263726 K7EIL1 84 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms