RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
SNRNP40-201ENST00000263694 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
SNRNP40-201ENST00000263694 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
SNRNP40-201ENST00000263694 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
SNRNP40-201ENST00000263694 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-201ENST00000263694 TRAV13-2A0A0B4J235 113 aa6.1□□□□□ -1.43
SNRNP40-201ENST00000263694 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
SNRNP40-201ENST00000263694 SCXQ7RTU7 201 aa6.1□□□□□ -1.43
SNRNP40-201ENST00000263694 PLAC8Q9NZF1 115 aa6.1□□□□□ -1.43
SNRNP40-201ENST00000263694 EPM2AB3EWF7 344 aa6.1□□□□□ -1.43
SNRNP40-201ENST00000263694 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
SNRNP40-201ENST00000263694 IGLV6-57P01721 117 aa6.1□□□□□ -1.43
SNRNP40-201ENST00000263694 TSPAN13O95857 204 aa6.09□□□□□ -1.43
SNRNP40-201ENST00000263694 SMIM11BQ8TCY0 68 aa6.09□□□□□ -1.43
SNRNP40-201ENST00000263694 IGLV1-50A0A075B6I6 118 aa6.08□□□□□ -1.44
SNRNP40-201ENST00000263694 Q1RN00 199 aa6.08□□□□□ -1.44
SNRNP40-201ENST00000263694 COL5A1-AS1Q5SY13 56 aa6.08□□□□□ -1.44
SNRNP40-201ENST00000263694 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
SNRNP40-201ENST00000263694 UBE2BP63146 152 aa6.07□□□□□ -1.44
SNRNP40-201ENST00000263694 XGP55808 180 aa6.06□□□□□ -1.44
SNRNP40-201ENST00000263694 LBHQ53QV2 105 aaPredicted RBP6.06□□□□□ -1.44
SNRNP40-201ENST00000263694 TRAV23DV6A0A075B6W5 121 aa6.06□□□□□ -1.44
SNRNP40-201ENST00000263694 H3BUT2 72 aa6.06□□□□□ -1.44
SNRNP40-201ENST00000263694 KCNQ1DNQ9H478 68 aa6.06□□□□□ -1.44
SNRNP40-201ENST00000263694 TRIAP1O43715 76 aa6.05□□□□□ -1.44
SNRNP40-201ENST00000263694 PSMB2P49721 201 aa6.05□□□□□ -1.44
SNRNP40-201ENST00000263694 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
SNRNP40-201ENST00000263694 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-201ENST00000263694 C9orf118A6NHY6 69 aa6.04□□□□□ -1.44
SNRNP40-201ENST00000263694 ZNF73O43830 326 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-201ENST00000263694 SMR3BP02814 79 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-201ENST00000263694 RPL28P46779 137 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-201ENST00000263694 C6orf99Q4VX62 202 aa6.04□□□□□ -1.44
SNRNP40-201ENST00000263694 REG3GQ6UW15 175 aa6.03□□□□□ -1.44
SNRNP40-201ENST00000263694 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
SNRNP40-201ENST00000263694 PRYO14603 147 aa6.02□□□□□ -1.45
SNRNP40-201ENST00000263694 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
SNRNP40-201ENST00000263694 SCGB1C2P0DMR2 95 aa6.01□□□□□ -1.45
SNRNP40-201ENST00000263694 CLEC2BQ92478 149 aa6.01□□□□□ -1.45
SNRNP40-201ENST00000263694 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
SNRNP40-201ENST00000263694 KRTAP4-16G5E9R7 235 aaPredicted RBP6.01□□□□□ -1.45
SNRNP40-201ENST00000263694 SPRR1AP35321 89 aa6.01□□□□□ -1.45
SNRNP40-201ENST00000263694 FAM218AQ96MZ4 157 aa6.01□□□□□ -1.45
SNRNP40-201ENST00000263694 ETDCA0A1B0GVM5 59 aa6□□□□□ -1.45
SNRNP40-201ENST00000263694 A0A1W2PPM0 123 aa6□□□□□ -1.45
SNRNP40-201ENST00000263694 PRLHP81277 87 aa6□□□□□ -1.45
SNRNP40-201ENST00000263694 C1orf137Q5JT78 98 aa6□□□□□ -1.45
SNRNP40-201ENST00000263694 FAM19A1Q7Z5A9 133 aa6□□□□□ -1.45
SNRNP40-201ENST00000263694 B5MCH6 92 aa5.99□□□□□ -1.45
SNRNP40-201ENST00000263694 COX7BP24311 80 aa5.99□□□□□ -1.45
SNRNP40-201ENST00000263694 SRRM2Q9UQ35 2752 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-201ENST00000263694 TCL1BO95988 128 aa5.98□□□□□ -1.45
SNRNP40-201ENST00000263694 A0A1B0GV90 55 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 BCE1O60756 84 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 COX6CP09669 75 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 ELOF1P60002 83 aaKnown RBP5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 VAMP3Q15836 100 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 Q9BRP9 147 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 CBY1Q9Y3M2 126 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 FABP2P12104 132 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 UBE2AP49459 152 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 Q6ZRX8 168 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
SNRNP40-201ENST00000263694 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.45
SNRNP40-201ENST00000263694 TRBV7-6A0A0J9YX20 115 aa5.96□□□□□ -1.46
SNRNP40-201ENST00000263694 H0YGX0 51 aa5.96□□□□□ -1.46
SNRNP40-201ENST00000263694 ERC2-IT1O76042 136 aa5.96□□□□□ -1.46
SNRNP40-201ENST00000263694 LINC00575Q6W349 94 aa5.96□□□□□ -1.46
SNRNP40-201ENST00000263694 CDK2AP2O75956 126 aa5.95□□□□□ -1.46
SNRNP40-201ENST00000263694 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
SNRNP40-201ENST00000263694 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
SNRNP40-201ENST00000263694 HIGD2AQ9BW72 106 aa5.95□□□□□ -1.46
SNRNP40-201ENST00000263694 SPCS1Q9Y6A9 102 aa5.95□□□□□ -1.46
SNRNP40-201ENST00000263694 HSPG2P98160 4391 aa5.95□□□□□ -1.46
SNRNP40-201ENST00000263694 IGLV7-43P04211 117 aa5.94□□□□□ -1.46
SNRNP40-201ENST00000263694 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
SNRNP40-201ENST00000263694 hADV29S1A0JD25 119 aa5.93□□□□□ -1.46
SNRNP40-201ENST00000263694 LST1O00453 97 aa5.93□□□□□ -1.46
SNRNP40-201ENST00000263694 FAT1Q14517 4588 aa5.93□□□□□ -1.46
SNRNP40-201ENST00000263694 H3BMG7 143 aa5.93□□□□□ -1.46
SNRNP40-201ENST00000263694 GHRHP01286 108 aa5.93□□□□□ -1.46
SNRNP40-201ENST00000263694 MTURNQ8N3F0 131 aa5.93□□□□□ -1.46
SNRNP40-201ENST00000263694 ST20-AS1Q8NBB2 130 aa5.93□□□□□ -1.46
SNRNP40-201ENST00000263694 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 H0Y9J4 135 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 K7EP34 96 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 SLC25A20O43772 301 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 ZNF861PO60384 105 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 ATXN8Q156A1 80 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 LYRM7Q5U5X0 104 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
SNRNP40-201ENST00000263694 RYR1P21817 5038 aa5.91□□□□□ -1.46
SNRNP40-201ENST00000263694 TRBV20-1A0A075B6N2 111 aa5.91□□□□□ -1.46
SNRNP40-201ENST00000263694 INAFM2P0DMQ5 153 aa5.91□□□□□ -1.46
SNRNP40-201ENST00000263694 Q6ZQY7 126 aa5.91□□□□□ -1.46
SNRNP40-201ENST00000263694 DEFB105AQ8NG35 78 aa5.91□□□□□ -1.46
SNRNP40-201ENST00000263694 TRACP01848 142 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms