RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
CPS1-201ENST00000233072 Q6ZSA8 131 aa4.55□□□□□ -1.68
CPS1-201ENST00000233072 PLAC8Q9NZF1 115 aa4.55□□□□□ -1.68
CPS1-201ENST00000233072 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
CPS1-201ENST00000233072 MED13LQ71F56 2210 aa4.54□□□□□ -1.68
CPS1-201ENST00000233072 SMR3BP02814 79 aaPredicted RBP4.54□□□□□ -1.68
CPS1-201ENST00000233072 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
CPS1-201ENST00000233072 CREBBPQ92793 2442 aa4.53□□□□□ -1.68
CPS1-201ENST00000233072 HRES1P13985 223 aa4.53□□□□□ -1.68
CPS1-201ENST00000233072 A0A0G2JQZ4 141 aa4.52□□□□□ -1.69
CPS1-201ENST00000233072 ASB16-AS1Q495Z4 193 aa4.52□□□□□ -1.69
CPS1-201ENST00000233072 Q8N1X5 172 aa4.52□□□□□ -1.69
CPS1-201ENST00000233072 PRR26Q8N8Z3 221 aa4.52□□□□□ -1.69
CPS1-201ENST00000233072 SORL1Q92673 2214 aa4.52□□□□□ -1.69
CPS1-201ENST00000233072 A0A0D9SG42 100 aa4.51□□□□□ -1.69
CPS1-201ENST00000233072 A0A1B0GU33 70 aa4.51□□□□□ -1.69
CPS1-201ENST00000233072 ZCCHC13Q8WW36 166 aaKnown RBP4.51□□□□□ -1.69
CPS1-201ENST00000233072 NOTCH3Q9UM47 2321 aa4.51□□□□□ -1.69
CPS1-201ENST00000233072 SPRR1BP22528 89 aa4.5□□□□□ -1.69
CPS1-201ENST00000233072 Q5XG85 94 aa4.5□□□□□ -1.69
CPS1-201ENST00000233072 SPRR1AP35321 89 aa4.5□□□□□ -1.69
CPS1-201ENST00000233072 NBASA2RRP1 2371 aa4.49□□□□□ -1.69
CPS1-201ENST00000233072 WNK1Q9H4A3 2382 aa4.49□□□□□ -1.69
CPS1-201ENST00000233072 S4R3F8 94 aa4.49□□□□□ -1.69
CPS1-201ENST00000233072 TNP2Q05952 138 aa4.49□□□□□ -1.69
CPS1-201ENST00000233072 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
CPS1-201ENST00000233072 NAV2Q8IVL1 2488 aa4.48□□□□□ -1.69
CPS1-201ENST00000233072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
CPS1-201ENST00000233072 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
CPS1-201ENST00000233072 CSAG1Q6PB30 78 aa4.45□□□□□ -1.7
CPS1-201ENST00000233072 MUC4Q99102 2169 aa4.44□□□□□ -1.7
CPS1-201ENST00000233072 CUL9Q8IWT3 2517 aa4.44□□□□□ -1.7
CPS1-201ENST00000233072 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
CPS1-201ENST00000233072 Q5VV11 94 aa4.43□□□□□ -1.7
CPS1-201ENST00000233072 ACACBO00763 2458 aa4.43□□□□□ -1.7
CPS1-201ENST00000233072 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
CPS1-201ENST00000233072 Q5W150 140 aa4.41□□□□□ -1.7
CPS1-201ENST00000233072 FP248Q71RG6 208 aaPredicted RBP4.41□□□□□ -1.7
CPS1-201ENST00000233072 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
CPS1-201ENST00000233072 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
CPS1-201ENST00000233072 CSPG4Q6UVK1 2322 aa4.41□□□□□ -1.7
CPS1-201ENST00000233072 HIVEP3Q5T1R4 2406 aa4.41□□□□□ -1.7
CPS1-201ENST00000233072 ROMO1P60602 79 aa4.4□□□□□ -1.7
CPS1-201ENST00000233072 SPINK7P58062 85 aa4.4□□□□□ -1.71
CPS1-201ENST00000233072 ATRXP46100 2492 aa4.39□□□□□ -1.71
CPS1-201ENST00000233072 KRTAP16-1A8MUX0 517 aa4.38□□□□□ -1.71
CPS1-201ENST00000233072 M0R2T5 61 aa4.38□□□□□ -1.71
CPS1-201ENST00000233072 KRTAP26-1Q6PEX3 210 aa4.36□□□□□ -1.71
CPS1-201ENST00000233072 OXTP01178 125 aa4.36□□□□□ -1.71
CPS1-201ENST00000233072 LCE6AA0A183 80 aa4.35□□□□□ -1.71
CPS1-201ENST00000233072 SPG11Q96JI7 2443 aa4.35□□□□□ -1.71
CPS1-201ENST00000233072 Q8NDZ9 215 aa4.34□□□□□ -1.71
CPS1-201ENST00000233072 RPL37P61927 97 aaKnown RBP4.34□□□□□ -1.71
CPS1-201ENST00000233072 Q5VSD8 79 aa4.34□□□□□ -1.71
CPS1-201ENST00000233072 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.72
CPS1-201ENST00000233072 Q6ZR54 194 aa4.33□□□□□ -1.72
CPS1-201ENST00000233072 PTPN13Q12923 2485 aa4.32□□□□□ -1.72
CPS1-201ENST00000233072 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
CPS1-201ENST00000233072 R4GN34 69 aa4.32□□□□□ -1.72
CPS1-201ENST00000233072 ABCA2Q9BZC7 2435 aa4.3□□□□□ -1.72
CPS1-201ENST00000233072 IGF2RP11717 2491 aa4.3□□□□□ -1.72
CPS1-201ENST00000233072 TTC28Q96AY4 2481 aa4.29□□□□□ -1.72
CPS1-201ENST00000233072 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
CPS1-201ENST00000233072 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
CPS1-201ENST00000233072 KRTAP4-16G5E9R7 235 aaPredicted RBP4.27□□□□□ -1.73
CPS1-201ENST00000233072 CYSTM1Q9H1C7 97 aa4.27□□□□□ -1.73
CPS1-201ENST00000233072 LRRK2Q5S007 2527 aa4.27□□□□□ -1.73
CPS1-201ENST00000233072 CR1P17927 2039 aa4.26□□□□□ -1.73
CPS1-201ENST00000233072 NCOR2Q9Y618 2525 aa4.25□□□□□ -1.73
CPS1-201ENST00000233072 A0A087X002 238 aa4.25□□□□□ -1.73
CPS1-201ENST00000233072 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
CPS1-201ENST00000233072 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
CPS1-201ENST00000233072 M0QZ58 72 aa4.24□□□□□ -1.73
CPS1-201ENST00000233072 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
CPS1-201ENST00000233072 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
CPS1-201ENST00000233072 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
CPS1-201ENST00000233072 A6NN06 94 aa4.22□□□□□ -1.73
CPS1-201ENST00000233072 CCDC168Q8NDH2 2452 aa4.21□□□□□ -1.73
CPS1-201ENST00000233072 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
CPS1-201ENST00000233072 BDP1A6H8Y1 2624 aa4.21□□□□□ -1.74
CPS1-201ENST00000233072 ANKRD17O75179 2603 aaKnown RBP4.2□□□□□ -1.74
CPS1-201ENST00000233072 SONP18583 2426 aaKnown RBP4.19□□□□□ -1.74
CPS1-201ENST00000233072 DOPEY1Q5JWR5 2465 aa4.19□□□□□ -1.74
CPS1-201ENST00000233072 PANO1I0J062 215 aa4.19□□□□□ -1.74
CPS1-201ENST00000233072 NOTCH2Q04721 2471 aa4.18□□□□□ -1.74
CPS1-201ENST00000233072 CACNA1AO00555 2505 aa4.18□□□□□ -1.74
CPS1-201ENST00000233072 PIEZO2Q9H5I5 2752 aa4.18□□□□□ -1.74
CPS1-201ENST00000233072 TLN1Q9Y490 2541 aaKnown RBP4.18□□□□□ -1.74
CPS1-201ENST00000233072 C2CD3Q4AC94 2353 aa4.18□□□□□ -1.74
CPS1-201ENST00000233072 PIEZO1Q92508 2521 aa4.16□□□□□ -1.74
CPS1-201ENST00000233072 ZNF462Q96JM2 2506 aa4.15□□□□□ -1.75
CPS1-201ENST00000233072 Q6ZRN7 208 aaPredicted RBP4.14□□□□□ -1.75
CPS1-201ENST00000233072 KRTAP21-3Q3LHN1 58 aa4.12□□□□□ -1.75
CPS1-201ENST00000233072 KRTAP13-1Q8IUC0 172 aa4.11□□□□□ -1.75
CPS1-201ENST00000233072 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
CPS1-201ENST00000233072 ABCA12Q86UK0 2595 aa4.1□□□□□ -1.75
CPS1-201ENST00000233072 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
CPS1-201ENST00000233072 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
CPS1-201ENST00000233072 EP400Q96L91 3159 aa4.08□□□□□ -1.76
CPS1-201ENST00000233072 A8MUU9 505 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms