RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 4930442H23RikQ9D5G7 103 aa15.36■□□□□ 0.05
Trim71-201ENSMUST00000111816 Znf385cA2A5E6 429 aa15.36■□□□□ 0.05
Trim71-201ENSMUST00000111816 Dll3O88516 592 aa15.36■□□□□ 0.05
Trim71-201ENSMUST00000111816 Trav6-1A0A075B5Z8 112 aa15.36■□□□□ 0.05
Trim71-201ENSMUST00000111816 Zfp72Q0VFY0 435 aa15.36■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ighv1-54A0A075B5W5 117 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Wfdc18P62810 74 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Defb5Q9EPV9 64 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ndufs7Q9DC70 224 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Cisd3B1AR13 137 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Cox6b1P56391 86 aaKnown RBP15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Pebp1P70296 187 aaKnown RBP15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Rpl36aP83882 106 aaKnown RBP15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Pear1Q8VIK5 1034 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Timm10bQ9WV96 100 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Igkv4-50A0A0B4J1J0 117 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Gm5615Q3UW02 101 aa15.35■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ms4a12A0A087WSB9 263 aa15.34■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ly6g5bQ8K1T4 194 aa15.34■□□□□ 0.05
Trim71-201ENSMUST00000111816 H3BKT1 185 aa15.34■□□□□ 0.05
Trim71-201ENSMUST00000111816 GaptQ8CB93 157 aa15.34■□□□□ 0.05
Trim71-201ENSMUST00000111816 Spink10Q8CAC8 162 aa15.34■□□□□ 0.05
Trim71-201ENSMUST00000111816 Tmem89Q9DA04 169 aa15.33■□□□□ 0.05
Trim71-201ENSMUST00000111816 Atg2aQ6P4T0 1914 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Trav21-dv12A0A075B6C4 109 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Igkv12-44A0A140T8M2 115 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Gpx1P11352 201 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Atp5g2P56383 146 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Atp5g3P56384 141 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Mrpl51Q9CPY1 128 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Atp5g1Q9CR84 136 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 AdmP97297 184 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Tmem42Q9CR22 157 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Vpreb2P13373 142 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Trav18A0A075B656 109 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 MscO88940 201 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 P01822 137 aa15.33■□□□□ 0.04
Trim71-201ENSMUST00000111816 Gm9857F7CXR1 130 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Slc25a39Q9D8K8 359 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 PappaQ8R4K8 1624 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 SlpiP97430 131 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Gatd1Q8BFQ8 220 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Fblim1Q71FD7 375 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Spink6Q8BT20 105 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Igkv4-54A0A0G2JES9 117 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Taf15Q8BQ46 557 aaKnown RBP15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Col11a2Q64739 1736 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 ApomQ9Z1R3 190 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Igkv4-59A0A0B4J1I8 117 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Rnf39A2RT81 352 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Prss57Q14B24 284 aa15.32■□□□□ 0.04
Trim71-201ENSMUST00000111816 Defb46Q4QY34 57 aa15.31■□□□□ 0.04
Trim71-201ENSMUST00000111816 Spink1P09036 80 aa15.31■□□□□ 0.04
Trim71-201ENSMUST00000111816 Efnb3O35393 340 aa15.31■□□□□ 0.04
Trim71-201ENSMUST00000111816 Rnf126Q91YL2 313 aa15.31■□□□□ 0.04
Trim71-201ENSMUST00000111816 LtaP09225 202 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Olfr211Q8VGH2 309 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Tnfrsf12aQ9CR75 129 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 P01634 136 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 H2-DMb1P35737 261 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 St6galnac3Q9WUV2 305 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Tmem213Q08EA8 116 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Igkv4-61A0A0G2JH00 117 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Trav4n-4A0A075B615 110 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Olfr748E9Q9Z0 307 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Vgll4Q80V24 287 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Fam168aQ8BGZ2 244 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 Igkv4-63A0A0G2JFU6 117 aa15.3■□□□□ 0.04
Trim71-201ENSMUST00000111816 P01811 117 aa15.29■□□□□ 0.04
Trim71-201ENSMUST00000111816 Tmem256Q5F285 113 aa15.29■□□□□ 0.04
Trim71-201ENSMUST00000111816 Susd3Q9D176 269 aa15.29■□□□□ 0.04
Trim71-201ENSMUST00000111816 LctF8VPT3 1931 aa15.29■□□□□ 0.04
Trim71-201ENSMUST00000111816 Brd3osA0A1B0GRB6 84 aa15.29■□□□□ 0.04
Trim71-201ENSMUST00000111816 Ovol1Q9WTJ2 267 aa15.29■□□□□ 0.04
Trim71-201ENSMUST00000111816 Wnt2P21552 360 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Cldn23Q9D7D7 296 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Slc25a28Q8R0Z5 364 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Tet2Q4JK59 1912 aaKnown RBP15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Ly6lH3BJG9 140 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 P01746 140 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Edn1P22387 202 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 AtraidQ6PGD0 223 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Immp1lQ9CQU8 166 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Gm15091B1AZM2 449 aa15.28■□□□□ 0.04
Trim71-201ENSMUST00000111816 Ighv5-4A0A075B5P9 117 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 PdpnQ62011 172 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 Gm17334Q8C6U3 126 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 Rasl10aQ8K5A4 203 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 Rnf115Q9D0C1 305 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 D430019H16RikJ3QPM6 83 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 Efna2P52801 209 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 Lims2Q91XD2 341 aa15.27■□□□□ 0.04
Trim71-201ENSMUST00000111816 Bcorl1A2AQH4 1781 aa15.27■□□□□ 0.03
Trim71-201ENSMUST00000111816 Myod1P10085 318 aa15.27■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igkv3-1A0A075B5P1 119 aa15.27■□□□□ 0.03
Trim71-201ENSMUST00000111816 Cpsf4lE9Q2N0 280 aa15.27■□□□□ 0.03
Trim71-201ENSMUST00000111816 Ear14F6YUX7 155 aa15.27■□□□□ 0.03
Trim71-201ENSMUST00000111816 PspnO70300 156 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Mrps36Q9CQX8 102 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Jsrp1Q3MI48 332 aa15.26■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms