RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ighv9-3A0A0B4J1J5 117 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm17359A0A0G2JEB7 487 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm6993A0A1W2P738 69 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ly6eQ64253 130 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ubtd1Q91WB7 227 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Stpg1Q9D2F5 341 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Sh2d6Q9D413 297 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Lyrm7Q9DA03 104 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Pde4dipQ80YT7 2224 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Trav4-4-dv10A0A075B651 110 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Igkv14-100A0A0G2JG36 117 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm15056F6ZR08 88 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Klk1b5P15945 261 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Cox6a1P43024 111 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ypel5P62700 121 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Q6DIA7 600 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Vkorc1l1Q6TEK5 176 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Zdhhc25Q810M4 279 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Mlf1Q9QWV4 267 aa7.76□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Tarm1B6A8R8 288 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm10251J3QPM5 127 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 P01630 113 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Defb45Q3V490 66 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 PgpQ8CHP8 321 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ammecr1Q9JHT5 344 aaKnown RBP7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Atg2bQ80XK6 2075 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Usf3B2RUQ2 2221 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Trav6d-3A0A075B6B3 112 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Umad1E0CX23 159 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm43517E9PYS1 339 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Lgals6O54891 301 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 P01793 123 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Defa2P28309 93 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Trav6-3Q5R1E6 112 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 ScxQ64124 207 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 ManfQ9CXI5 179 aaKnown RBP7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Tmem52Q9D702 196 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 ApooQ9DCZ4 198 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Dpm2Q9Z324 84 aa7.75□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ighv14-1A0A075B5R4 117 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ube2d1P61080 147 aaKnown RBP7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Rnf183Q8QZS5 190 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Rnf186Q9D241 226 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Mettl26Q9DCS2 204 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ighv9-4A0A0A6YWH6 117 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 P01759 136 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Lgals4Q8K419 326 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gpx7Q99LJ6 186 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ly96Q9JHF9 160 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Dock9Q8BIK4 2055 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm28044L7N1X0 119 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm6760Q0ZNK3 87 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 B430305J03RikQ8BQQ8 176 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Fbxl15Q91W61 300 aa7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Tet1Q3URK3 2007 aaKnown RBP7.74□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gpr179E9PY61 2293 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ncoa6Q9JL19 2067 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Olfr753-ps1A0A140LHN3 164 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Klri1B2KG20 248 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 P04219 140 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ssr4Q62186 172 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Nabp2Q8R2Y9 212 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Q9DAS2 200 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Wdr31Q9JHB4 367 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 GlrxQ9QUH0 107 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Plekhb2Q9QZC7 221 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 SpaarA0A1B0GSZ0 75 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Olfr748E9Q9Z0 307 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 P01791 123 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Sod1P08228 154 aaKnown RBP7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Q3UNZ8 350 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Olfr736Q8VFT6 312 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Tnfrsf22Q9ER62 198 aa7.73□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ice1E9Q286 2241 aaKnown RBP7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gm20219A0A1B0GRQ3 87 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Trav7-2Q5R1I3 112 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Snrnp40Q6PE01 358 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Sdhaf4Q8BTE0 104 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Timm21Q8CCM6 249 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Sertad4A7DTG3 377 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 PolP10400 120 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Q9CX63 252 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Tex36Q9D5N9 219 aa7.72□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Cd209gD3Z5D4 194 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Rnase2bO35292 155 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Ly86O88188 162 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Cdv3Q4VAA2 281 aaKnown RBP7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Olfr1243Q8VGM7 305 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Tac4Q99N14 128 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Mrpl53Q9D1H8 118 aaKnown RBP7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Wdr38Q9D994 303 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Pradc1Q9D9N8 188 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Gng12Q9DAS9 72 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Frem3Q5H8B9 2123 aa7.71□□□□□ -1.17
Hmgb1-201ENSMUST00000085546 Zfp950A0A0U1RQ46 609 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Rps28P62858 69 aaKnown RBP7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Pip4p1Q3TWL2 284 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Chac1Q8R3J5 223 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Il1f10Q8R459 152 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Olfr470Q8VF65 314 aa7.71□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms