RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ifi27Q8C6G0 260 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Tmem116A0A0G2JGD3 401 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Trbv14A0A140T8L9 115 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Gm21983D6RFS9 131 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Icam2P35330 277 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Arf6P62331 175 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Defa22Q8C1N8 93 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Rnf182Q8C432 247 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Olfr1012Q8VFJ7 311 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Card19Q9D1I2 183 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ighv14-3A0A075B5R9 117 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 F2rl1P55086 399 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 9230109A22RikQ8BHE6 111 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ly6g5bQ8K1T4 194 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Tmem52Q9D702 196 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Lyg1Q9D7Q0 197 aa11.82□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ighv5-6A0A075B5Q0 117 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 Znf787Q8BIF9 381 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 Gm10190Q8BSD7 107 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 RelnQ60841 3461 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 Trdv1A0A075B657 112 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 Obp2bA2BHR0 176 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 LtaP09225 202 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 TbpP29037 316 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 4930474N05RikQ8BVR5 218 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 Mrpl20Q9CQL4 149 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 Pygo1Q9D0P5 417 aa11.81□□□□□ -0.52
Nup54-201ENSMUST00000038514 Gm28305F6U473 122 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 P0C913 63 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 BtcQ05928 177 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 Gm1968Q3T9I3 115 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ang6Q5GAN0 147 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 Fam206aQ80ZQ9 193 aaKnown RBP11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 EppinQ9DA01 134 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 Cml3Q9JIY8 226 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 SpegQ62407 3262 aa11.8□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ighv7-3A0A075B5R2 120 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Cd5P13379 494 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Trappc1Q5NCF2 145 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Igfbpl1Q80W15 270 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Klk10Q99M20 278 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Srd5a2Q99N99 254 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Tspo2Q9CRZ8 162 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Slc25a39Q9D8K8 359 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Trav9d-1A0A075B699 112 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Rps20P60867 119 aaKnown RBP11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Col8a1Q00780 744 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ormdl3Q9CPZ6 153 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Fxyd4Q9D2W0 88 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Gm15294V9GXA7 121 aa11.79□□□□□ -0.52
Nup54-201ENSMUST00000038514 Zfp983E9PUT0 460 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 LoxP28301 411 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Olfr1367Q8VFG2 316 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 SelenokQ9JLJ1 94 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Nat6Q9R123 314 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Defa35E9QLQ1 93 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Mamld1P0C6A2 803 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Olfr904Q7TRC9 310 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Scnm1Q8K136 229 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 GlmpQ9JHJ3 404 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 PdfS4R2K0 231 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Tln2Q71LX4 2375 aa11.78□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ighv2-6A0A075B6A7 116 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ighv1-69A0A0G2JFS5 117 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Shisal2aA2A9G7 189 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 1700003H04RikE9PXM2 192 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Cnih1O35372 144 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 ElaneQ3UP87 265 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Higd1cQ76I25 96 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Habp2Q8K0D2 558 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Stxbp6Q8R3T5 210 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Mrpl53Q9D1H8 118 aaKnown RBP11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 CtrlQ9ER05 264 aa11.77□□□□□ -0.52
Nup54-201ENSMUST00000038514 Ros1Q78DX7 2340 aa11.77□□□□□ -0.53
Nup54-201ENSMUST00000038514 Myod1P10085 318 aa11.77□□□□□ -0.53
Nup54-201ENSMUST00000038514 Cox8bP48772 70 aa11.77□□□□□ -0.53
Nup54-201ENSMUST00000038514 Borcs7Q9CRC6 105 aa11.77□□□□□ -0.53
Nup54-201ENSMUST00000038514 Lypd8Q9D7S0 255 aa11.77□□□□□ -0.53
Nup54-201ENSMUST00000038514 Timm23Q9WTQ8 209 aa11.77□□□□□ -0.53
Nup54-201ENSMUST00000038514 AcanQ61282 2132 aaKnown RBP11.77□□□□□ -0.53
Nup54-201ENSMUST00000038514 Trdv2-1A0A0G2JGB9 116 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Olfr1185-ps1F6XP16 303 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Gm5426J3QNM7 103 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 P01791 123 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Obox7Q4KL20 218 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Trdv2-2Q5R1A4 116 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Bhlha15Q9QYC3 197 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ighv7-4A0A0A6YXL5 121 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Gm45623A0A1B0GSF6 103 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Gm16442D3YZG3 307 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Sub1P11031 127 aaKnown RBP11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Mfge8P21956 463 aaKnown RBP11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 9130230L23RikQ8CC80 163 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Hyls1Q9CXX0 307 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 Crybb3Q9JJU9 211 aa11.76□□□□□ -0.53
Nup54-201ENSMUST00000038514 TroQ6DIC6 2087 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ighv14-2A0A075B5R7 117 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Trav14n-2A0A0G2JDF5 121 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Dkk4Q8VEJ3 221 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Tmem89Q9DA04 169 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms