RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Psg25Q497W1 475 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gpx7Q99LJ6 186 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Mettl26Q9DCS2 204 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Zdhhc16Q9ESG8 361 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 PigyP0C1P0 71 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Pate4Q09098 99 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Spata45Q9CVW4 97 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gnb1lQ9EQ15 326 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 V1ra8Q9EQ48 279 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm19410A0A140LJC7 2098 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm27021M0QWE2 156 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm4792Q569Q2 183 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Slc25a29Q8BL03 306 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Tex48Q9DA81 110 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 MyofQ69ZN7 2048 aaKnown RBP8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Esp24A8R0V6 68 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm17660B9UIU9 90 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm12830F6XVH0 157 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 LtaP09225 202 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Srp14P16254 110 aaKnown RBP8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Jsrp1Q3MI48 332 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Trav3-1Q5R1I8 114 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Prima1Q810F0 153 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Rnf125Q9D9R0 233 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Wnt2P21552 360 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Tmem40Q4FJU9 225 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Khdc1cQ4KL78 166 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Fbxl7Q5BJ29 491 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Spink2Q8BMY7 86 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ccpg1osV9GXK1 122 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Olfr748E9Q9Z0 307 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Cd59aO55186 123 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Loxl2P58022 776 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Snrpd3P62320 126 aaKnown RBP8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm12888Q3UW77 119 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Cox7a2lQ61387 111 aa8.1□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Trav14n-3A0A075B645 120 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Trav19A0A0B4J1K4 119 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm12169F2Z474 250 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 SeleQ00690 612 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Pom121l2Q5SW25 972 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ube2d2bQ6ZWY6 147 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 GalmQ8K157 342 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Iah1Q9DB29 249 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Trav16d-dv11A0A075B617 117 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Bak1O08734 209 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Dkk1O54908 272 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm17334Q8C6U3 126 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Dusp14Q9JLY7 198 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ighv5-9A0A075B5Q2 117 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm29644A0A087WPG2 191 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Igkv13-84A0A140T8N3 115 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 P01801 115 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Fam168aQ8BGZ2 244 aa8.09□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ighv1-7A0A075B5T7 117 aa8.09□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Adrb3P25962 400 aa8.09□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gng7Q61016 68 aa8.09□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Zg16Q8K0C5 167 aa8.09□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Saa4P31532 130 aa8.08□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Rspo1Q9Z132 265 aa8.08□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm94Q3V2D2 93 aa8.08□□□□□ -1.12
Ldlr-201ENSMUST00000034713 MycbQ6P8Z1 170 aa8.08□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Tnrc6aQ3UHK8 1896 aaKnown RBP8.08□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm933J3QPC1 141 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 KncnQ307W7 124 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 A730015C16RikQ8C992 119 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 OtorQ9JIE3 128 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 HelzQ6DFV5 1964 aaKnown RBP8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Hbb-bsA8DUK4 147 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Zcchc24B2RVL6 241 aaKnown RBP8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Hbb-b1P02088 147 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Pde6hP61249 83 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm10803Q3TZS6 135 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Lypd8Q9D7S0 255 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Tomm40Q9QYA2 361 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Trip12G5E870 2025 aaKnown RBP8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Ighv1-26A0A075B5V0 117 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 RhogP84096 191 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Defa23Q5G866 93 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Spink6Q8BT20 105 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Rnase2aQ8K196 155 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 MavsQ8VCF0 503 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Lyzl1Q9CPX3 148 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Sptbn4E9PX29 2561 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Ighv1-37A0A0A6YW32 117 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Inafm1E9PV59 130 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Olfr1367Q8VFG2 316 aa8.07□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Cox6a1P43024 111 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm1553Q66VB7 94 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Iba57Q8CAK1 358 aaKnown RBP8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Vmn1r216Q8R257 298 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Klk7Q91VE3 249 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Usf3B2RUQ2 2221 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Zfp648D3Z0W3 525 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm17727E9Q4V7 109 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm17732E9Q5I2 61 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 P01725 110 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Ms4a8Q99N10 290 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Arfgef3Q3UGY8 2170 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Fer1l4A3KGK3 1992 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms