RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PRSS3P2Q8NHM4 247 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 C8orf49Q96NF6 230 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 PLNP26678 52 aa5.76□□□□□ -1.49
GPC6-202ENST00000617456 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
GPC6-202ENST00000617456 COX8CQ7Z4L0 72 aa5.76□□□□□ -1.49
GPC6-202ENST00000617456 IGLV5-52A0A0A0MRZ9 124 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 GNRH2O43555 120 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 IGLV2-11P01706 119 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 IGHV3-53P01767 116 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 IGHV3-33P01772 117 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 GYPEP15421 78 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 ZNF876PQ49A33 203 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
GPC6-202ENST00000617456 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
GPC6-202ENST00000617456 TIMM17BO60830 172 aa5.74□□□□□ -1.49
GPC6-202ENST00000617456 CFC1BP0CG36 223 aa5.74□□□□□ -1.49
GPC6-202ENST00000617456 CFC1P0CG37 223 aa5.74□□□□□ -1.49
GPC6-202ENST00000617456 ZNF22P17026 224 aaPredicted RBP5.74□□□□□ -1.49
GPC6-202ENST00000617456 RIGQ13278 110 aa5.74□□□□□ -1.49
GPC6-202ENST00000617456 RHOHQ15669 191 aa5.74□□□□□ -1.49
GPC6-202ENST00000617456 RPP21Q9H633 154 aaKnown RBP5.74□□□□□ -1.49
GPC6-202ENST00000617456 MSRB1Q9NZV6 116 aa5.74□□□□□ -1.49
GPC6-202ENST00000617456 TRBV6-1A0A0K0K1D8 114 aa5.73□□□□□ -1.49
GPC6-202ENST00000617456 H7C423 109 aa5.73□□□□□ -1.49
GPC6-202ENST00000617456 M0R378 163 aa5.73□□□□□ -1.49
GPC6-202ENST00000617456 FCER1GP30273 86 aa5.73□□□□□ -1.49
GPC6-202ENST00000617456 XCL1P47992 114 aa5.73□□□□□ -1.49
GPC6-202ENST00000617456 LINC01556Q5JQF7 62 aa5.73□□□□□ -1.49
GPC6-202ENST00000617456 SMCR5Q8TEV8 140 aa5.73□□□□□ -1.49
GPC6-202ENST00000617456 IGHV3-38A0A0C4DH36 116 aa5.72□□□□□ -1.49
GPC6-202ENST00000617456 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
GPC6-202ENST00000617456 ZNF80P51504 273 aaPredicted RBP5.72□□□□□ -1.49
GPC6-202ENST00000617456 LAGE3Q14657 143 aa5.72□□□□□ -1.49
GPC6-202ENST00000617456 WFDC10BQ8IUB3 73 aa5.72□□□□□ -1.49
GPC6-202ENST00000617456 SLC25A29Q8N8R3 303 aa5.72□□□□□ -1.49
GPC6-202ENST00000617456 PGLYRP4Q96LB8 373 aa5.72□□□□□ -1.49
GPC6-202ENST00000617456 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.71□□□□□ -1.5
GPC6-202ENST00000617456 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
GPC6-202ENST00000617456 PSCAO43653 123 aa5.71□□□□□ -1.5
GPC6-202ENST00000617456 PLA2G1BP04054 148 aaKnown RBP5.71□□□□□ -1.5
GPC6-202ENST00000617456 RNASE3P12724 160 aaKnown RBP5.71□□□□□ -1.5
GPC6-202ENST00000617456 LELP1Q5T871 98 aa5.71□□□□□ -1.5
GPC6-202ENST00000617456 PRNTQ86SH4 94 aa5.71□□□□□ -1.5
GPC6-202ENST00000617456 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
GPC6-202ENST00000617456 C11orf21Q9P2W6 132 aa5.71□□□□□ -1.5
GPC6-202ENST00000617456 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
GPC6-202ENST00000617456 IGKV3D-20A0A0C4DH25 116 aa5.7□□□□□ -1.5
GPC6-202ENST00000617456 TRBV10-3A0A0K0K1G6 114 aa5.7□□□□□ -1.5
GPC6-202ENST00000617456 IGHV3-30P01768 117 aa5.7□□□□□ -1.5
GPC6-202ENST00000617456 IGHV3-30-5P0DP03 117 aa5.7□□□□□ -1.5
GPC6-202ENST00000617456 S100A4P26447 101 aaKnown RBP5.7□□□□□ -1.5
GPC6-202ENST00000617456 Q1T7F1 81 aa5.7□□□□□ -1.5
GPC6-202ENST00000617456 MRPL35Q9NZE8 188 aaKnown RBP5.7□□□□□ -1.5
GPC6-202ENST00000617456 DNAH8Q96JB1 4490 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 A0A1B0GUT8 65 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 UBE2L6O14933 153 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 ATP5EP2Q5VTU8 51 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 Q6ZVQ6 151 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 TIMM21Q9BVV7 248 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 UBE2D4Q9Y2X8 147 aa5.69□□□□□ -1.5
GPC6-202ENST00000617456 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 TRBV10-1A0A0K0K1A3 114 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 LRCOL1A6NCL2 159 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 K7EMI3 77 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 LST1O00453 97 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 SS18Q15532 418 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 Q86TA4 180 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 Q8N814 137 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 DEFB104AQ8WTQ1 72 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 CHCHD7Q9BUK0 85 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 Q9HAA7 133 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 PLA2G2DQ9UNK4 145 aa5.68□□□□□ -1.5
GPC6-202ENST00000617456 TRAV8-3A0A0A6YYJ7 113 aa5.67□□□□□ -1.5
GPC6-202ENST00000617456 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
GPC6-202ENST00000617456 TMEM223A0PJW6 202 aa5.67□□□□□ -1.5
GPC6-202ENST00000617456 COX6CP09669 75 aa5.67□□□□□ -1.5
GPC6-202ENST00000617456 CKS2P33552 79 aa5.67□□□□□ -1.5
GPC6-202ENST00000617456 CRIP1P50238 77 aa5.67□□□□□ -1.5
GPC6-202ENST00000617456 LCA10Q71F78 164 aa5.67□□□□□ -1.5
GPC6-202ENST00000617456 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
GPC6-202ENST00000617456 F8VRH5 84 aa5.66□□□□□ -1.5
GPC6-202ENST00000617456 VCYO14598 125 aa5.66□□□□□ -1.5
GPC6-202ENST00000617456 ZNF73O43830 326 aaPredicted RBP5.66□□□□□ -1.5
GPC6-202ENST00000617456 ARMS2P0C7Q2 107 aa5.66□□□□□ -1.5
GPC6-202ENST00000617456 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
GPC6-202ENST00000617456 PHLDA3Q9Y5J5 127 aa5.66□□□□□ -1.5
GPC6-202ENST00000617456 SH2D1AO60880 128 aa5.65□□□□□ -1.5
GPC6-202ENST00000617456 PRSS1P07477 247 aa5.65□□□□□ -1.5
GPC6-202ENST00000617456 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
GPC6-202ENST00000617456 RMI2Q96E14 147 aa5.65□□□□□ -1.5
GPC6-202ENST00000617456 IGHV3-30-3P0DP02 117 aa5.64□□□□□ -1.51
GPC6-202ENST00000617456 UBE2BP63146 152 aa5.64□□□□□ -1.51
GPC6-202ENST00000617456 RBM3P98179 157 aaKnown RBP5.64□□□□□ -1.51
GPC6-202ENST00000617456 PAPPA-AS1Q5QFB9 102 aa5.64□□□□□ -1.51
GPC6-202ENST00000617456 TOMM6Q96B49 74 aa5.64□□□□□ -1.51
GPC6-202ENST00000617456 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
GPC6-202ENST00000617456 LECT2O14960 151 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms