RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 TRIAP1O43715 76 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 SS18Q15532 418 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 Q1RN00 199 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 MEIG1Q5JSS6 88 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 MTURNQ8N3F0 131 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 LINC01600Q96MT4 127 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 VPS25Q9BRG1 176 aa5.86□□□□□ -1.47
SMAD4-217ENST00000611848 PRR34Q9NV39 138 aa5.86□□□□□ -1.47
SMAD4-217ENST00000611848 DYNC1H1Q14204 4646 aaKnown RBP5.86□□□□□ -1.47
SMAD4-217ENST00000611848 A0A087WTM6 91 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 ATXN8Q156A1 80 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 ENHOQ6UWT2 76 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 C5orf38Q86SI9 138 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 LINC00269Q8N2A0 174 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 C1orf43Q9BWL3 253 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 IGKV2D-24A0A075B6R9 120 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 A0A0U1RRA0 63 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 J3QR89 54 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 RPL13AP40429 203 aaKnown RBP5.85□□□□□ -1.47
SMAD4-217ENST00000611848 XCL1P47992 114 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 TOMM7Q9P0U1 55 aa5.85□□□□□ -1.47
SMAD4-217ENST00000611848 PKHD1P08F94 4074 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 TRAV8-4A0A0B4J246 113 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 COX6CP09669 75 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 MALP21145 153 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 REG3AQ06141 175 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 LINC01620Q4KN68 170 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 CD164L2Q6UWJ8 174 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 Q8IZM0 81 aa5.84□□□□□ -1.47
SMAD4-217ENST00000611848 LRCOL1A6NCL2 159 aa5.83□□□□□ -1.48
SMAD4-217ENST00000611848 SLC25A20O43772 301 aa5.83□□□□□ -1.48
SMAD4-217ENST00000611848 FOXI1Q12951 378 aa5.83□□□□□ -1.48
SMAD4-217ENST00000611848 CLPSL2Q6UWE3 100 aa5.83□□□□□ -1.48
SMAD4-217ENST00000611848 TEN1Q86WV5 123 aa5.83□□□□□ -1.48
SMAD4-217ENST00000611848 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
SMAD4-217ENST00000611848 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
SMAD4-217ENST00000611848 C9JAW5 83 aa5.82□□□□□ -1.48
SMAD4-217ENST00000611848 C6orf226Q5I0X4 101 aa5.82□□□□□ -1.48
SMAD4-217ENST00000611848 TRBV10-2A0A0K0K1G8 114 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 LST1O00453 97 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 COX7A2LO14548 114 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 LINC00158P58513 81 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 KIAA0087Q14695 138 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 PPDPFLQ8WWR9 84 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 CHCHD10Q8WYQ3 142 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-217ENST00000611848 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 TRAV13-2A0A0B4J235 113 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 C16orf90A8MZG2 172 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 KRTAP10-2P60368 255 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 ANKRD29Q8N6D5 301 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 Q8N814 137 aa5.81□□□□□ -1.48
SMAD4-217ENST00000611848 NTN5Q8WTR8 489 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-217ENST00000611848 IGLV10-54A0A075B6I4 117 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 IGKV2-28A0A075B6P5 120 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 IGKV2D-28P01615 120 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 CXCL5P42830 114 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 C14orf177Q52M58 125 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 KRTAP26-1Q6PEX3 210 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 CLEC2BQ92478 149 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 SND1-IT1Q9HBX3 110 aa5.8□□□□□ -1.48
SMAD4-217ENST00000611848 GAGE12HA6NDE8 117 aa5.79□□□□□ -1.48
SMAD4-217ENST00000611848 H3BT86 120 aa5.79□□□□□ -1.48
SMAD4-217ENST00000611848 LECT2O14960 151 aa5.78□□□□□ -1.48
SMAD4-217ENST00000611848 PFN2P35080 140 aa5.78□□□□□ -1.48
SMAD4-217ENST00000611848 RPL28P46779 137 aaKnown RBP5.78□□□□□ -1.48
SMAD4-217ENST00000611848 COX17Q14061 63 aa5.78□□□□□ -1.48
SMAD4-217ENST00000611848 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
SMAD4-217ENST00000611848 LINC00337Q8N6G1 96 aa5.78□□□□□ -1.48
SMAD4-217ENST00000611848 IGLV5-52A0A0A0MRZ9 124 aa5.77□□□□□ -1.48
SMAD4-217ENST00000611848 PCP4P48539 62 aa5.77□□□□□ -1.48
SMAD4-217ENST00000611848 CKS1BP61024 79 aa5.77□□□□□ -1.48
SMAD4-217ENST00000611848 USP17L23D6RBM5 183 aa5.77□□□□□ -1.49
SMAD4-217ENST00000611848 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
SMAD4-217ENST00000611848 TRACP01848 142 aa5.76□□□□□ -1.49
SMAD4-217ENST00000611848 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-217ENST00000611848 NDUFC2O95298 119 aa5.75□□□□□ -1.49
SMAD4-217ENST00000611848 FUSP35637 526 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMAD4-217ENST00000611848 XP32Q5T750 250 aa5.74□□□□□ -1.49
SMAD4-217ENST00000611848 SMIM11BQ8TCY0 68 aa5.74□□□□□ -1.49
SMAD4-217ENST00000611848 SIGMAR1Q99720 223 aa5.74□□□□□ -1.49
SMAD4-217ENST00000611848 H0YGX0 51 aa5.74□□□□□ -1.49
SMAD4-217ENST00000611848 APOBP04114 4563 aaKnown RBP5.74□□□□□ -1.49
SMAD4-217ENST00000611848 SPAG11BQ08648 103 aa5.74□□□□□ -1.49
SMAD4-217ENST00000611848 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
SMAD4-217ENST00000611848 GVQW2A0A096LPI5 108 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-217ENST00000611848 TEX49A0A1B0GTD5 131 aa5.73□□□□□ -1.49
SMAD4-217ENST00000611848 CDK2AP2O75956 126 aa5.73□□□□□ -1.49
SMAD4-217ENST00000611848 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
SMAD4-217ENST00000611848 KRTAP10-1P60331 282 aa5.72□□□□□ -1.49
SMAD4-217ENST00000611848 C10orf25Q5T742 122 aa5.72□□□□□ -1.49
SMAD4-217ENST00000611848 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
SMAD4-217ENST00000611848 C15orf56Q8N910 161 aa5.72□□□□□ -1.49
SMAD4-217ENST00000611848 SCGB1A1P11684 91 aa5.71□□□□□ -1.5
SMAD4-217ENST00000611848 CNBPP62633 177 aaKnown RBP5.71□□□□□ -1.5
SMAD4-217ENST00000611848 C9orf116Q5BN46 136 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-217ENST00000611848 RYR1P21817 5038 aa5.71□□□□□ -1.5
SMAD4-217ENST00000611848 OR13C6PQ8NH95 151 aa5.7□□□□□ -1.5
SMAD4-217ENST00000611848 C22orf24Q9Y442 160 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms