RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 SPXQ9BT56 116 aa4.05□□□□□ -1.76
LINC00649-213ENST00000608431 IGLV5-45A0A087WSX0 123 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 F6UB75 175 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 TIRAPP58753 221 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 DEFB1P60022 68 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 GAGE2AQ6NT46 116 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 Q6ZTC4 211 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 DEFB104AQ8WTQ1 72 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 MAP6D1Q9H9H5 199 aa4.04□□□□□ -1.76
LINC00649-213ENST00000608431 DAZ1Q9NQZ3 744 aaKnown RBP4.04□□□□□ -1.76
LINC00649-213ENST00000608431 IGHV1OR15-1A0A075B7D0 117 aa4.03□□□□□ -1.76
LINC00649-213ENST00000608431 DEFB131BA0A096LNP1 70 aa4.03□□□□□ -1.76
LINC00649-213ENST00000608431 SMR3BP02814 79 aaPredicted RBP4.03□□□□□ -1.76
LINC00649-213ENST00000608431 TMEM258P61165 79 aa4.03□□□□□ -1.76
LINC00649-213ENST00000608431 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
LINC00649-213ENST00000608431 FAM74A4Q5TZK3 123 aa4.03□□□□□ -1.76
LINC00649-213ENST00000608431 FAM19A5Q7Z5A7 132 aaPredicted RBP4.03□□□□□ -1.76
LINC00649-213ENST00000608431 LINC00308Q8TCZ7 52 aa4.03□□□□□ -1.76
LINC00649-213ENST00000608431 RHPN1-AS1Q9BWJ2 59 aa4.03□□□□□ -1.76
LINC00649-213ENST00000608431 TRAV12-3A0A0B4J271 114 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 TRAV25A0A0B4J276 109 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 IGLV5-39A0A0G2JS06 123 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 DEFB4AO15263 64 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 OXTP01178 125 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 TRBV12-3P01733 135 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 BAALC-AS2P0C853 105 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 RPL35AP18077 110 aaKnown RBP4.02□□□□□ -1.77
LINC00649-213ENST00000608431 RPL18AQ02543 176 aaKnown RBP4.02□□□□□ -1.77
LINC00649-213ENST00000608431 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
LINC00649-213ENST00000608431 PIK3CD-AS1Q5SR53 167 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 Q6JHZ5 121 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 FAM19A3Q7Z5A8 133 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 DAZ4Q86SG3 579 aaKnown RBP4.02□□□□□ -1.77
LINC00649-213ENST00000608431 CHCHD7Q9BUK0 85 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 DAZ3Q9NR90 486 aaKnown RBP4.02□□□□□ -1.77
LINC00649-213ENST00000608431 UBE2D4Q9Y2X8 147 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 C22orf24Q9Y442 160 aa4.02□□□□□ -1.77
LINC00649-213ENST00000608431 NBDYA0A0U1RRE5 68 aa4.01□□□□□ -1.77
LINC00649-213ENST00000608431 LOC107984640A0A0U1RRK4 108 aa4.01□□□□□ -1.77
LINC00649-213ENST00000608431 TNXBP22105 4242 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 NPC2P61916 151 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 SERP2Q8N6R1 65 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 Q8NAQ8 132 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 OBSCN-AS1Q96MR7 158 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 UPK3BQ9BT76 320 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
LINC00649-213ENST00000608431 TRAV13-2A0A0B4J235 113 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 hADV29S1A0JD25 119 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 NDUFC2-KCTD14E9PQ53 114 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 K7EQG2 157 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 MIFP14174 115 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
LINC00649-213ENST00000608431 SNRPD3P62318 126 aaKnown RBP3.99□□□□□ -1.77
LINC00649-213ENST00000608431 SOSTDC1Q6X4U4 206 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 DPH3Q96FX2 82 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 CDKN2A-AS1Q9UH64 79 aa3.99□□□□□ -1.77
LINC00649-213ENST00000608431 A8MTW9 85 aa3.98□□□□□ -1.77
LINC00649-213ENST00000608431 DNAL4O96015 105 aa3.98□□□□□ -1.77
LINC00649-213ENST00000608431 ZNF625Q96I27 306 aaPredicted RBP3.98□□□□□ -1.77
LINC00649-213ENST00000608431 FAM218AQ96MZ4 157 aa3.98□□□□□ -1.77
LINC00649-213ENST00000608431 LINC00467Q9BRT7 94 aa3.98□□□□□ -1.77
LINC00649-213ENST00000608431 Q9H8V8 135 aa3.98□□□□□ -1.77
LINC00649-213ENST00000608431 IGKV3-7A0A075B6H7 116 aa3.97□□□□□ -1.77
LINC00649-213ENST00000608431 TRAV12-2A0A075B6T6 113 aa3.97□□□□□ -1.77
LINC00649-213ENST00000608431 IGHV4-28A0A0C4DH34 117 aa3.97□□□□□ -1.77
LINC00649-213ENST00000608431 SMIM1B2RUZ4 78 aa3.97□□□□□ -1.77
LINC00649-213ENST00000608431 H0YGX0 51 aa3.97□□□□□ -1.77
LINC00649-213ENST00000608431 CMC4P56277 68 aaPredicted RBP3.97□□□□□ -1.77
LINC00649-213ENST00000608431 ODF3L2Q3SX64 289 aa3.97□□□□□ -1.77
LINC00649-213ENST00000608431 RNASE13Q5GAN3 156 aaKnown RBP3.97□□□□□ -1.77
LINC00649-213ENST00000608431 ATP5EP2Q5VTU8 51 aa3.97□□□□□ -1.77
LINC00649-213ENST00000608431 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
LINC00649-213ENST00000608431 IGHV3OR16-12A0A075B7B8 117 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
LINC00649-213ENST00000608431 USP17L23D6RBM5 183 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 NDUFC2O95298 119 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 IGHV3-53P01767 116 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 CRPP02741 224 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 EDN2P20800 178 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 SPINK13Q1W4C9 94 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 S100A7L2Q5SY68 101 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 LINC00242Q5T6M2 205 aa3.96□□□□□ -1.78
LINC00649-213ENST00000608431 TRAV13-1A0A0B4J241 112 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 F5H768 121 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 RS1O15537 224 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 BCE1O60756 84 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 COX6A2Q02221 97 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 Q5XG85 94 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 LINC00846Q9NV44 126 aa3.95□□□□□ -1.78
LINC00649-213ENST00000608431 IGHV3-73A0A0B4J1V6 119 aa3.94□□□□□ -1.78
LINC00649-213ENST00000608431 IGKV3D-7A0A0C4DH55 119 aa3.94□□□□□ -1.78
LINC00649-213ENST00000608431 TRBV10-3A0A0K0K1G6 114 aa3.94□□□□□ -1.78
LINC00649-213ENST00000608431 IGKV3-20P01619 116 aa3.94□□□□□ -1.78
LINC00649-213ENST00000608431 KRTAP10-1P60331 282 aa3.94□□□□□ -1.78
LINC00649-213ENST00000608431 DGAT2L7PQ6IED9 249 aa3.94□□□□□ -1.78
LINC00649-213ENST00000608431 LINC01561Q8N1V8 128 aa3.94□□□□□ -1.78
LINC00649-213ENST00000608431 Q9HAA7 133 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms