RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 ZNF561-AS1K7EIQ3 104 aa10.1□□□□□ -0.79
CDCA3-211ENST00000603043 SLPIP03973 132 aa10.1□□□□□ -0.79
CDCA3-211ENST00000603043 SMIM20Q8N5G0 67 aa10.1□□□□□ -0.79
CDCA3-211ENST00000603043 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-211ENST00000603043 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
CDCA3-211ENST00000603043 SCGB1D4Q6XE38 83 aa10.1□□□□□ -0.79
CDCA3-211ENST00000603043 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
CDCA3-211ENST00000603043 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
CDCA3-211ENST00000603043 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
CDCA3-211ENST00000603043 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
CDCA3-211ENST00000603043 C9orf163Q8N9P6 203 aa10.08□□□□□ -0.8
CDCA3-211ENST00000603043 IGLV4-69A0A075B6H9 119 aa10.08□□□□□ -0.8
CDCA3-211ENST00000603043 CCDC179H3BU77 68 aa10.08□□□□□ -0.8
CDCA3-211ENST00000603043 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
CDCA3-211ENST00000603043 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
CDCA3-211ENST00000603043 KIAA1109Q2LD37 5005 aa10.07□□□□□ -0.8
CDCA3-211ENST00000603043 SLC25A20O43772 301 aa10.07□□□□□ -0.8
CDCA3-211ENST00000603043 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
CDCA3-211ENST00000603043 HERVK_113P61574 105 aa10.06□□□□□ -0.8
CDCA3-211ENST00000603043 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
CDCA3-211ENST00000603043 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
CDCA3-211ENST00000603043 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
CDCA3-211ENST00000603043 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
CDCA3-211ENST00000603043 SYCNQ0VAF6 134 aa10.05□□□□□ -0.8
CDCA3-211ENST00000603043 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
CDCA3-211ENST00000603043 CAMK2N2Q96S95 79 aa10.05□□□□□ -0.8
CDCA3-211ENST00000603043 PRO1854Q9UHT4 67 aa10.05□□□□□ -0.8
CDCA3-211ENST00000603043 C2orf48Q96LS8 159 aa10.04□□□□□ -0.8
CDCA3-211ENST00000603043 CFC1BP0CG36 223 aa10.03□□□□□ -0.8
CDCA3-211ENST00000603043 CFC1P0CG37 223 aa10.03□□□□□ -0.8
CDCA3-211ENST00000603043 Q6ZSA8 131 aa10.03□□□□□ -0.8
CDCA3-211ENST00000603043 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
CDCA3-211ENST00000603043 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
CDCA3-211ENST00000603043 C9JAW5 83 aa10.02□□□□□ -0.81
CDCA3-211ENST00000603043 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
CDCA3-211ENST00000603043 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
CDCA3-211ENST00000603043 Q6ZRU5 148 aa10.02□□□□□ -0.81
CDCA3-211ENST00000603043 SMIM1B2RUZ4 78 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 KIAA0087Q14695 138 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 APOBP04114 4563 aaKnown RBP10.01□□□□□ -0.81
CDCA3-211ENST00000603043 F8WDY8 70 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 NDUFA1O15239 70 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 PRSS2P07478 247 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 ATXN8Q156A1 80 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
CDCA3-211ENST00000603043 C11orf86A6NJI1 115 aa10□□□□□ -0.81
CDCA3-211ENST00000603043 ZNF22P17026 224 aaPredicted RBP10□□□□□ -0.81
CDCA3-211ENST00000603043 Q8IZM0 81 aa10□□□□□ -0.81
CDCA3-211ENST00000603043 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
CDCA3-211ENST00000603043 HAMPP81172 84 aa9.99□□□□□ -0.81
CDCA3-211ENST00000603043 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
CDCA3-211ENST00000603043 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
CDCA3-211ENST00000603043 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
CDCA3-211ENST00000603043 FAM240AA0A1B0GVK7 77 aa9.97□□□□□ -0.81
CDCA3-211ENST00000603043 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
CDCA3-211ENST00000603043 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
CDCA3-211ENST00000603043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.97□□□□□ -0.81
CDCA3-211ENST00000603043 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
CDCA3-211ENST00000603043 C10orf25Q5T742 122 aa9.97□□□□□ -0.81
CDCA3-211ENST00000603043 RYR1P21817 5038 aa9.97□□□□□ -0.81
CDCA3-211ENST00000603043 PANO1I0J062 215 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 COX7B2Q8TF08 81 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 C6orf48Q9UBA6 75 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 HSPG2P98160 4391 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 DNAH8Q96JB1 4490 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 TRBV7-7A0A0K0K1E9 115 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
CDCA3-211ENST00000603043 A0A096LNI7 61 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 IGKV2-24A0A0C4DH68 120 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 IGLV5-39A0A0G2JS06 123 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 LOC107984640A0A0U1RRK4 108 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 CXCL5P42830 114 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 CIRBPQ14011 172 aaKnown RBP9.94□□□□□ -0.82
CDCA3-211ENST00000603043 SPANXCQ9NY87 97 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 H3BT86 120 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 SPACA4Q8TDM5 124 aa9.94□□□□□ -0.82
CDCA3-211ENST00000603043 CIRBP-AS1Q8TBR5 109 aa9.93□□□□□ -0.82
CDCA3-211ENST00000603043 IMUPQ9GZP8 106 aa9.93□□□□□ -0.82
CDCA3-211ENST00000603043 LGALS3P17931 250 aaKnown RBP9.92□□□□□ -0.82
CDCA3-211ENST00000603043 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
CDCA3-211ENST00000603043 DPH3Q96FX2 82 aa9.92□□□□□ -0.82
CDCA3-211ENST00000603043 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
CDCA3-211ENST00000603043 A4D1N5 150 aa9.92□□□□□ -0.82
CDCA3-211ENST00000603043 LINC00474Q9P2X8 69 aa9.92□□□□□ -0.82
CDCA3-211ENST00000603043 J3QQQ9 107 aa9.91□□□□□ -0.82
CDCA3-211ENST00000603043 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
CDCA3-211ENST00000603043 C9orf116Q5BN46 136 aaPredicted RBP9.9□□□□□ -0.82
CDCA3-211ENST00000603043 TEX49A0A1B0GTD5 131 aa9.9□□□□□ -0.83
CDCA3-211ENST00000603043 LEPROTO15243 131 aa9.9□□□□□ -0.83
CDCA3-211ENST00000603043 TLX1NBP0CAT3 122 aa9.9□□□□□ -0.83
CDCA3-211ENST00000603043 Q1RN00 199 aa9.9□□□□□ -0.83
CDCA3-211ENST00000603043 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
CDCA3-211ENST00000603043 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
CDCA3-211ENST00000603043 HERC2O95714 4834 aa9.89□□□□□ -0.83
CDCA3-211ENST00000603043 A0A087WYN8 130 aa9.88□□□□□ -0.83
CDCA3-211ENST00000603043 Q6ZRP5 223 aa9.88□□□□□ -0.83
CDCA3-211ENST00000603043 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms