RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 PCNTO95613 3336 aa2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 C3P01024 1663 aa2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 FAM208AQ9UK61 1670 aaKnown RBP2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 A0A087WVE0 104 aa2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 J3QRE1 110 aa2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 BRD3OSQ6XYD6 125 aa2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 FDCSPQ8NFU4 85 aa2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 ZCCHC13Q8WW36 166 aaKnown RBP2.13□□□□□ -2.07
SOX2-OT-219ENST00000593330 TRAV1-2A0A0B4J238 106 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 TRBV30A0A0K0K1B3 111 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 MGPP08493 103 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 FCER1GP30273 86 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 PCOTHQ58A44 107 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 C10orf99Q6UWK7 81 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 LINC00472Q9H8W2 130 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 FBN3Q75N90 2809 aa2.12□□□□□ -2.07
SOX2-OT-219ENST00000593330 IFI6P09912 130 aa2.11□□□□□ -2.07
SOX2-OT-219ENST00000593330 SNRPGP62308 76 aaKnown RBP2.11□□□□□ -2.07
SOX2-OT-219ENST00000593330 ABCA12Q86UK0 2595 aa2.11□□□□□ -2.07
SOX2-OT-219ENST00000593330 MYO18BQ8IUG5 2567 aa2.11□□□□□ -2.07
SOX2-OT-219ENST00000593330 ITPR3Q14573 2671 aa2.11□□□□□ -2.07
SOX2-OT-219ENST00000593330 INTS1Q8N201 2190 aaKnown RBP2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 EPG5Q9HCE0 2579 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 E9PCH4 1651 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 COL4A1P02462 1669 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 IQGAP1P46940 1657 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 TRBV7-4A0A0J9YYF1 115 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 HMGA1P17096 107 aaKnown RBP2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 QSER1Q2KHR3 1735 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 TULP4Q9NRJ4 1543 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 PAPPA2Q9BXP8 1791 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 SDK1Q7Z5N4 2213 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 DOPEY1Q5JWR5 2465 aa2.1□□□□□ -2.07
SOX2-OT-219ENST00000593330 KIF21BO75037 1637 aa2.09□□□□□ -2.07
SOX2-OT-219ENST00000593330 RICTORQ6R327 1708 aa2.09□□□□□ -2.07
SOX2-OT-219ENST00000593330 ACYP2P14621 99 aa2.09□□□□□ -2.07
SOX2-OT-219ENST00000593330 ABCC8Q09428 1581 aa2.09□□□□□ -2.08
SOX2-OT-219ENST00000593330 LRP6O75581 1613 aa2.09□□□□□ -2.08
SOX2-OT-219ENST00000593330 NHSL1Q5SYE7 1610 aa2.09□□□□□ -2.08
SOX2-OT-219ENST00000593330 SHPRHQ149N8 1683 aa2.09□□□□□ -2.08
SOX2-OT-219ENST00000593330 GCC2Q8IWJ2 1684 aa2.09□□□□□ -2.08
SOX2-OT-219ENST00000593330 TIAM2Q8IVF5 1701 aa2.08□□□□□ -2.08
SOX2-OT-219ENST00000593330 PARP4Q9UKK3 1724 aaKnown RBP2.08□□□□□ -2.08
SOX2-OT-219ENST00000593330 A0A096LNT2 108 aa2.08□□□□□ -2.08
SOX2-OT-219ENST00000593330 SERF2P84101 59 aa2.08□□□□□ -2.08
SOX2-OT-219ENST00000593330 COX17Q14061 63 aa2.08□□□□□ -2.08
SOX2-OT-219ENST00000593330 NRXN3Q9Y4C0 1643 aa2.08□□□□□ -2.08
SOX2-OT-219ENST00000593330 NCOA6Q14686 2063 aaPredicted RBP2.08□□□□□ -2.08
SOX2-OT-219ENST00000593330 HECTD1Q9ULT8 2610 aa2.07□□□□□ -2.08
SOX2-OT-219ENST00000593330 A0A1B0GUT8 65 aa2.07□□□□□ -2.08
SOX2-OT-219ENST00000593330 SMIM27A0A1W2PRY6 76 aa2.07□□□□□ -2.08
SOX2-OT-219ENST00000593330 SPATA8Q6RVD6 105 aa2.07□□□□□ -2.08
SOX2-OT-219ENST00000593330 MED13LQ71F56 2210 aa2.07□□□□□ -2.08
SOX2-OT-219ENST00000593330 ZFHX3Q15911 3703 aa2.06□□□□□ -2.08
SOX2-OT-219ENST00000593330 GCN1Q92616 2671 aaKnown RBP2.06□□□□□ -2.08
SOX2-OT-219ENST00000593330 TNRC18O15417 2968 aaPredicted RBP2.06□□□□□ -2.08
SOX2-OT-219ENST00000593330 K7EMI3 77 aa2.06□□□□□ -2.08
SOX2-OT-219ENST00000593330 SPINK7P58062 85 aa2.06□□□□□ -2.08
SOX2-OT-219ENST00000593330 ABCA2Q9BZC7 2435 aa2.06□□□□□ -2.08
SOX2-OT-219ENST00000593330 LY75O60449 1722 aa2.05□□□□□ -2.08
SOX2-OT-219ENST00000593330 DDX60LQ5H9U9 1706 aaKnown RBP2.05□□□□□ -2.08
SOX2-OT-219ENST00000593330 ZNF292O60281 2723 aa2.05□□□□□ -2.08
SOX2-OT-219ENST00000593330 NREPQ16612 68 aa2.05□□□□□ -2.08
SOX2-OT-219ENST00000593330 TMEM263Q8WUH6 116 aaKnown RBP2.05□□□□□ -2.08
SOX2-OT-219ENST00000593330 NDUFB1O75438 58 aa2.04□□□□□ -2.08
SOX2-OT-219ENST00000593330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.04□□□□□ -2.08
SOX2-OT-219ENST00000593330 BCORQ6W2J9 1755 aa2.04□□□□□ -2.08
SOX2-OT-219ENST00000593330 SPTBN4Q9H254 2564 aa2.04□□□□□ -2.08
SOX2-OT-219ENST00000593330 DNAJC13O75165 2243 aa2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 SAMD9LQ8IVG5 1584 aa2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 ASH1LQ9NR48 2969 aaKnown RBP2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 H0Y9P7 68 aa2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 PLNP26678 52 aa2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 PLAC4Q8WY50 150 aa2.03□□□□□ -2.08
SOX2-OT-219ENST00000593330 DOT1LQ8TEK3 1739 aa2.03□□□□□ -2.09
SOX2-OT-219ENST00000593330 SETD2Q9BYW2 2564 aaPredicted RBP2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 TRAV21A0A0B4J279 112 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 G3V318 75 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 C10orf113Q5VZT2 155 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 ENHOQ6UWT2 76 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 LINC00575Q6W349 94 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 UBL5Q9BZL1 73 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 DDX60Q8IY21 1712 aaKnown RBP2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 ZNF831Q5JPB2 1677 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 SSC5DA1L4H1 1573 aa2.02□□□□□ -2.09
SOX2-OT-219ENST00000593330 SLIT1O75093 1534 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 UBR4Q5T4S7 5183 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 SPINK4O60575 86 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 Q6ZRX8 168 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 SMIM11BQ8TCY0 68 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 TTC28Q96AY4 2481 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 DEPDC5O75140 1603 aa2.01□□□□□ -2.09
SOX2-OT-219ENST00000593330 LRRC37A2A6NM11 1700 aa2□□□□□ -2.09
SOX2-OT-219ENST00000593330 NRAPQ86VF7 1730 aa2□□□□□ -2.09
SOX2-OT-219ENST00000593330 ABCA1O95477 2261 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms