RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 AEBP2Q6ZN18 517 aaPredicted RBP34.98■■■■□ 3.19
SOX2-OT-219ENST00000593330 CHIC1Q5VXU3 224 aa33.31■■■□□ 2.92
SOX2-OT-219ENST00000593330 SENP3Q9H4L4 574 aaPredicted RBP30.19■■■□□ 2.42
SOX2-OT-219ENST00000593330 PHF23Q9BUL5 403 aaPredicted RBP29.63■■■□□ 2.33
SOX2-OT-219ENST00000593330 FOXD1Q16676 465 aa27.93■■■□□ 2.06
SOX2-OT-219ENST00000593330 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
SOX2-OT-219ENST00000593330 MSH5O43196 834 aa26.45■■□□□ 1.82
SOX2-OT-219ENST00000593330 PIAS4Q8N2W9 510 aaPredicted RBP26.18■■□□□ 1.78
SOX2-OT-219ENST00000593330 PPP6R1Q9UPN7 881 aa25.92■■□□□ 1.74
SOX2-OT-219ENST00000593330 ADRA2BP18089 450 aa25.88■■□□□ 1.73
SOX2-OT-219ENST00000593330 POTEDQ86YR6 584 aa25.76■■□□□ 1.71
SOX2-OT-219ENST00000593330 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
SOX2-OT-219ENST00000593330 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
SOX2-OT-219ENST00000593330 MAPK8IP2Q13387 824 aaPredicted RBP23.75■■□□□ 1.39
SOX2-OT-219ENST00000593330 PPP4R3CPQ6ZMV5 832 aa23.26■■□□□ 1.31
SOX2-OT-219ENST00000593330 CNKSR2Q8WXI2 1034 aa22.96■■□□□ 1.27
SOX2-OT-219ENST00000593330 HOXD11P31277 338 aaPredicted RBP22.91■■□□□ 1.26
SOX2-OT-219ENST00000593330 DCAF8L1A6NGE4 600 aa22.88■■□□□ 1.25
SOX2-OT-219ENST00000593330 RNF216Q9NWF9 866 aaPredicted RBP22.78■■□□□ 1.24
SOX2-OT-219ENST00000593330 CACNB1Q02641 598 aaPredicted RBP22.67■■□□□ 1.22
SOX2-OT-219ENST00000593330 NCBP3Q53F19 620 aaKnown RBP22.56■■□□□ 1.2
SOX2-OT-219ENST00000593330 RNF39Q9H2S5 420 aa22.41■■□□□ 1.18
SOX2-OT-219ENST00000593330 DNAJC5BQ9UF47 199 aa22.33■■□□□ 1.17
SOX2-OT-219ENST00000593330 C1QBPQ07021 282 aaKnown RBP22.21■■□□□ 1.15
SOX2-OT-219ENST00000593330 NPM3O75607 178 aaKnown RBP21.97■■□□□ 1.11
SOX2-OT-219ENST00000593330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.1
SOX2-OT-219ENST00000593330 KCNA4P22459 653 aa21.38■■□□□ 1.01
SOX2-OT-219ENST00000593330 U3KPZ7 1027 aaPredicted RBP21.28■■□□□ 1
SOX2-OT-219ENST00000593330 APLP2Q06481 763 aa21.09■□□□□ 0.97
SOX2-OT-219ENST00000593330 CAPN15O75808 1086 aa21.08■□□□□ 0.97
SOX2-OT-219ENST00000593330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
SOX2-OT-219ENST00000593330 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
SOX2-OT-219ENST00000593330 SPINK5Q9NQ38 1064 aaPredicted RBP20.95■□□□□ 0.94
SOX2-OT-219ENST00000593330 SLC4A2P04920 1241 aa20.93■□□□□ 0.94
SOX2-OT-219ENST00000593330 DSG3P32926 999 aa20.91■□□□□ 0.94
SOX2-OT-219ENST00000593330 ZNF219Q9P2Y4 722 aaPredicted RBP20.8■□□□□ 0.92
SOX2-OT-219ENST00000593330 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
SOX2-OT-219ENST00000593330 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
SOX2-OT-219ENST00000593330 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
SOX2-OT-219ENST00000593330 ABCB7O75027 752 aa20.46■□□□□ 0.87
SOX2-OT-219ENST00000593330 SLC4A1APQ9BWU0 796 aaKnown RBP20.3■□□□□ 0.84
SOX2-OT-219ENST00000593330 POTEHQ6S545 545 aa20.24■□□□□ 0.83
SOX2-OT-219ENST00000593330 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
SOX2-OT-219ENST00000593330 FOXD4L1Q9NU39 408 aa20.15■□□□□ 0.82
SOX2-OT-219ENST00000593330 POLA2Q14181 598 aa20.09■□□□□ 0.81
SOX2-OT-219ENST00000593330 ZBTB12Q9Y330 459 aaPredicted RBP19.94■□□□□ 0.78
SOX2-OT-219ENST00000593330 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
SOX2-OT-219ENST00000593330 ATXN8OSP0DMR3 200 aa19.67■□□□□ 0.74
SOX2-OT-219ENST00000593330 CHRDL2Q6WN34 429 aa19.64■□□□□ 0.73
SOX2-OT-219ENST00000593330 AKT1S1Q96B36 256 aa19.62■□□□□ 0.73
SOX2-OT-219ENST00000593330 ZBTB22O15209 634 aa19.55■□□□□ 0.72
SOX2-OT-219ENST00000593330 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
SOX2-OT-219ENST00000593330 FBLN2P98095 1184 aa19.34■□□□□ 0.69
SOX2-OT-219ENST00000593330 REM2Q8IYK8 340 aaPredicted RBP19.33■□□□□ 0.68
SOX2-OT-219ENST00000593330 SPDYE2BA6NHP3 402 aa19.19■□□□□ 0.66
SOX2-OT-219ENST00000593330 SPDYE6P0CI01 402 aa19.19■□□□□ 0.66
SOX2-OT-219ENST00000593330 SPDYE2Q495Y8 402 aa19.19■□□□□ 0.66
SOX2-OT-219ENST00000593330 PITPNM1O00562 1244 aa19.08■□□□□ 0.64
SOX2-OT-219ENST00000593330 PIP4P2Q8N4L2 257 aa19.08■□□□□ 0.64
SOX2-OT-219ENST00000593330 FXR2P51116 673 aaKnown RBP eCLIP18.99■□□□□ 0.63
SOX2-OT-219ENST00000593330 SP7Q8TDD2 431 aaPredicted RBP18.95■□□□□ 0.62
SOX2-OT-219ENST00000593330 SPDYE1Q8NFV5 336 aaPredicted RBP18.9■□□□□ 0.62
SOX2-OT-219ENST00000593330 ZNF692Q9BU19 519 aaPredicted RBP18.89■□□□□ 0.61
SOX2-OT-219ENST00000593330 HAX1O00165 279 aa18.85■□□□□ 0.61
SOX2-OT-219ENST00000593330 MKRN4PQ13434 485 aaPredicted RBP18.85■□□□□ 0.61
SOX2-OT-219ENST00000593330 SSUH2Q9Y2M2 353 aa18.81■□□□□ 0.6
SOX2-OT-219ENST00000593330 CLEC11AQ9Y240 323 aa18.76■□□□□ 0.59
SOX2-OT-219ENST00000593330 PRKAR2AP13861 404 aaKnown RBP18.64■□□□□ 0.57
SOX2-OT-219ENST00000593330 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
SOX2-OT-219ENST00000593330 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
SOX2-OT-219ENST00000593330 PRR29P0C7W0 189 aa18.51■□□□□ 0.55
SOX2-OT-219ENST00000593330 C19orf67A6NJJ6 358 aa18.38■□□□□ 0.53
SOX2-OT-219ENST00000593330 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
SOX2-OT-219ENST00000593330 EVX2Q03828 476 aa18.34■□□□□ 0.53
SOX2-OT-219ENST00000593330 CHADLQ6NUI6 762 aa18.28■□□□□ 0.52
SOX2-OT-219ENST00000593330 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
SOX2-OT-219ENST00000593330 FARP1Q9Y4F1 1045 aaPredicted RBP18.14■□□□□ 0.49
SOX2-OT-219ENST00000593330 CLCN6P51797 869 aa18.13■□□□□ 0.49
SOX2-OT-219ENST00000593330 GABBR2O75899 941 aa18.11■□□□□ 0.49
SOX2-OT-219ENST00000593330 SPDYE4A6NLX3 237 aa18.08■□□□□ 0.48
SOX2-OT-219ENST00000593330 CD44P16070 742 aaKnown RBP18.07■□□□□ 0.48
SOX2-OT-219ENST00000593330 CREBZFQ9NS37 354 aa17.88■□□□□ 0.45
SOX2-OT-219ENST00000593330 PAK3O75914 559 aaPredicted RBP17.82■□□□□ 0.44
SOX2-OT-219ENST00000593330 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
SOX2-OT-219ENST00000593330 ZNF579Q8NAF0 562 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-219ENST00000593330 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
SOX2-OT-219ENST00000593330 LHX8Q68G74 356 aa17.76■□□□□ 0.43
SOX2-OT-219ENST00000593330 DCBLD2Q96PD2 775 aa17.74■□□□□ 0.43
SOX2-OT-219ENST00000593330 POTEIP0CG38 1075 aa17.58■□□□□ 0.4
SOX2-OT-219ENST00000593330 PROM2Q8N271 834 aa17.58■□□□□ 0.4
SOX2-OT-219ENST00000593330 PLEKHG5O94827 1062 aa17.53■□□□□ 0.4
SOX2-OT-219ENST00000593330 MNX1P50219 401 aaPredicted RBP17.51■□□□□ 0.39
SOX2-OT-219ENST00000593330 GALR2O43603 387 aaPredicted RBP17.46■□□□□ 0.39
SOX2-OT-219ENST00000593330 PHF12Q96QT6 1004 aa17.42■□□□□ 0.38
SOX2-OT-219ENST00000593330 MIER1Q8N108 512 aa17.31■□□□□ 0.36
SOX2-OT-219ENST00000593330 TSPYL2Q9H2G4 693 aaPredicted RBP17.26■□□□□ 0.35
SOX2-OT-219ENST00000593330 ZBTB47Q9UFB7 747 aaPredicted RBP17.24■□□□□ 0.35
SOX2-OT-219ENST00000593330 MS4A3Q96HJ5 214 aa17.21■□□□□ 0.35
SOX2-OT-219ENST00000593330 ASTLQ6HA08 431 aaPredicted RBP17.2■□□□□ 0.34
SOX2-OT-219ENST00000593330 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms