RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 KNDC1Q76NI1 1749 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 SHPRHQ149N8 1683 aa-0.23□□□□□ -2.45
CDC27-219ENST00000576484 CPSF4LA6NMK7 179 aaKnown RBP-0.23□□□□□ -2.45
CDC27-219ENST00000576484 LOC730098B7Z3J9 87 aa-0.23□□□□□ -2.45
CDC27-219ENST00000576484 SPRR2BP35325 72 aa-0.23□□□□□ -2.45
CDC27-219ENST00000576484 NKTRP30414 1462 aaKnown RBP-0.23□□□□□ -2.45
CDC27-219ENST00000576484 SLIT1O75093 1534 aa-0.23□□□□□ -2.45
CDC27-219ENST00000576484 FMN2Q9NZ56 1722 aa-0.24□□□□□ -2.45
CDC27-219ENST00000576484 MARF1Q9Y4F3 1742 aaKnown RBP-0.24□□□□□ -2.45
CDC27-219ENST00000576484 UQCRHLA0A096LP55 91 aa-0.24□□□□□ -2.45
CDC27-219ENST00000576484 KRTAP19-7Q3SYF9 63 aa-0.24□□□□□ -2.45
CDC27-219ENST00000576484 ALKAL2Q6UX46 152 aa-0.24□□□□□ -2.45
CDC27-219ENST00000576484 I3L3M4 83 aa-0.25□□□□□ -2.45
CDC27-219ENST00000576484 S100A8P05109 93 aa-0.25□□□□□ -2.45
CDC27-219ENST00000576484 FAUP35544 74 aaKnown RBP-0.25□□□□□ -2.45
CDC27-219ENST00000576484 APLNQ9ULZ1 77 aa-0.25□□□□□ -2.45
CDC27-219ENST00000576484 ABCC10Q5T3U5 1492 aa-0.25□□□□□ -2.45
CDC27-219ENST00000576484 LRRC37AA6NMS7 1700 aa-0.25□□□□□ -2.45
CDC27-219ENST00000576484 HYDINQ4G0P3 5121 aa-0.25□□□□□ -2.45
CDC27-219ENST00000576484 PDZD2O15018 2839 aa-0.26□□□□□ -2.45
CDC27-219ENST00000576484 NEBP20929 6669 aa-0.26□□□□□ -2.45
CDC27-219ENST00000576484 EPRSP07814 1512 aaKnown RBP-0.26□□□□□ -2.45
CDC27-219ENST00000576484 ETDBQ3ZM63 59 aa-0.26□□□□□ -2.45
CDC27-219ENST00000576484 ZNF720Q7Z2F6 126 aa-0.26□□□□□ -2.45
CDC27-219ENST00000576484 PCLOQ9Y6V0 5065 aa-0.26□□□□□ -2.45
CDC27-219ENST00000576484 SAMD9Q5K651 1589 aa-0.27□□□□□ -2.45
CDC27-219ENST00000576484 PSENENQ9NZ42 101 aa-0.27□□□□□ -2.45
CDC27-219ENST00000576484 SRRM2Q9UQ35 2752 aaKnown RBP-0.28□□□□□ -2.45
CDC27-219ENST00000576484 IQSEC2Q5JU85 1478 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 REV3LO60673 3130 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 PKHD1P08F94 4074 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 FLGP20930 4061 aaPredicted RBP-0.28□□□□□ -2.45
CDC27-219ENST00000576484 D6R8Y8 96 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 F8WEM9 126 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 M0R2T5 61 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 MUSTN1Q8IVN3 82 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 SNHG12Q9BXW3 62 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 KIAA1551Q9HCM1 1747 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 CUX1P39880 1505 aa-0.28□□□□□ -2.45
CDC27-219ENST00000576484 FANCAO15360 1455 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 NBEAL1Q6ZS30 2694 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 HERC2O95714 4834 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 LEPROTL1O95214 131 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 PKIAP61925 76 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 RYR3Q15413 4870 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 ANKRD36A6QL64 1941 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 STAB2Q8WWQ8 2551 aa-0.29□□□□□ -2.46
CDC27-219ENST00000576484 MON2Q7Z3U7 1717 aa-0.3□□□□□ -2.46
CDC27-219ENST00000576484 C5P01031 1676 aa-0.3□□□□□ -2.46
CDC27-219ENST00000576484 CLTCQ00610 1675 aaKnown RBP-0.3□□□□□ -2.46
CDC27-219ENST00000576484 SPRR2AP35326 72 aa-0.3□□□□□ -2.46
CDC27-219ENST00000576484 H1FX-AS1Q4G0G2 97 aa-0.3□□□□□ -2.46
CDC27-219ENST00000576484 CNOT1A5YKK6 2376 aaKnown RBP-0.3□□□□□ -2.46
CDC27-219ENST00000576484 GYPAP02724 150 aa-0.31□□□□□ -2.46
CDC27-219ENST00000576484 IGLC2P0DOY2 106 aa-0.31□□□□□ -2.46
CDC27-219ENST00000576484 IGLC3P0DOY3 106 aa-0.31□□□□□ -2.46
CDC27-219ENST00000576484 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
CDC27-219ENST00000576484 MRPL34Q9BQ48 92 aaKnown RBP-0.31□□□□□ -2.46
CDC27-219ENST00000576484 HIGD1BQ9P298 99 aa-0.31□□□□□ -2.46
CDC27-219ENST00000576484 ATP10BO94823 1461 aa-0.31□□□□□ -2.46
CDC27-219ENST00000576484 DOPEY1Q5JWR5 2465 aa-0.31□□□□□ -2.46
CDC27-219ENST00000576484 ANKRD26Q9UPS8 1709 aa-0.32□□□□□ -2.46
CDC27-219ENST00000576484 TRANK1O15050 2925 aa-0.32□□□□□ -2.46
CDC27-219ENST00000576484 SPTY2D1-AS1A0A0U1RR47 76 aa-0.32□□□□□ -2.46
CDC27-219ENST00000576484 CCL22O00626 93 aa-0.32□□□□□ -2.46
CDC27-219ENST00000576484 TROQ12816 1431 aaPredicted RBP-0.32□□□□□ -2.46
CDC27-219ENST00000576484 LAMA5O15230 3695 aa-0.33□□□□□ -2.46
CDC27-219ENST00000576484 FAT3Q8TDW7 4589 aa-0.33□□□□□ -2.46
CDC27-219ENST00000576484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.33□□□□□ -2.462e-12■□□□□ 9.3
CDC27-219ENST00000576484 SPRR2EP22531 72 aa-0.33□□□□□ -2.46
CDC27-219ENST00000576484 KRTAP6-2Q3LI66 62 aa-0.33□□□□□ -2.46
CDC27-219ENST00000576484 UBE2D4Q9Y2X8 147 aa-0.33□□□□□ -2.46
CDC27-219ENST00000576484 CLIP1P30622 1438 aa-0.33□□□□□ -2.46
CDC27-219ENST00000576484 PKD1P98161 4303 aa-0.33□□□□□ -2.46
CDC27-219ENST00000576484 SVEP1Q4LDE5 3571 aa-0.34□□□□□ -2.46
CDC27-219ENST00000576484 DNAH6Q9C0G6 4158 aa-0.34□□□□□ -2.46
CDC27-219ENST00000576484 TGP01266 2768 aa-0.34□□□□□ -2.46
CDC27-219ENST00000576484 RYR1P21817 5038 aa-0.34□□□□□ -2.46
CDC27-219ENST00000576484 KIAA1109Q2LD37 5005 aa-0.34□□□□□ -2.46
CDC27-219ENST00000576484 CCNB3Q8WWL7 1395 aa-0.34□□□□□ -2.46
CDC27-219ENST00000576484 UBR4Q5T4S7 5183 aa-0.34□□□□□ -2.46
CDC27-219ENST00000576484 CRYBG1Q9Y4K1 1723 aa-0.35□□□□□ -2.47
CDC27-219ENST00000576484 SMIM11AP58511 58 aa-0.35□□□□□ -2.47
CDC27-219ENST00000576484 C20orf78Q9BR46 151 aa-0.35□□□□□ -2.47
CDC27-219ENST00000576484 PCNX1Q96RV3 2341 aa-0.35□□□□□ -2.47
CDC27-219ENST00000576484 STARD9Q9P2P6 4700 aa-0.36□□□□□ -2.47
CDC27-219ENST00000576484 AKAP12Q02952 1782 aa-0.36□□□□□ -2.47
CDC27-219ENST00000576484 HMGN2P05204 90 aaKnown RBP-0.36□□□□□ -2.47
CDC27-219ENST00000576484 MT4P47944 62 aa-0.36□□□□□ -2.47
CDC27-219ENST00000576484 DEFB112Q30KQ8 113 aa-0.36□□□□□ -2.47
CDC27-219ENST00000576484 KRTAP20-2Q3LI61 65 aa-0.36□□□□□ -2.47
CDC27-219ENST00000576484 AKAP13Q12802 2813 aa-0.36□□□□□ -2.47
CDC27-219ENST00000576484 USH2AO75445 5202 aa-0.36□□□□□ -2.47
CDC27-219ENST00000576484 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.36□□□□□ -2.47
CDC27-219ENST00000576484 CEP162Q5TB80 1403 aa-0.37□□□□□ -2.47
CDC27-219ENST00000576484 DEFB135Q30KP9 77 aa-0.37□□□□□ -2.47
CDC27-219ENST00000576484 NF1P21359 2839 aa-0.37□□□□□ -2.47
CDC27-219ENST00000576484 MYH4Q9Y623 1939 aa-0.37□□□□□ -2.47
CDC27-219ENST00000576484 SETD2Q9BYW2 2564 aaPredicted RBP-0.37□□□□□ -2.47
CDC27-219ENST00000576484 ADAMTS12P58397 1594 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms