RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 AKAP12Q02952 1782 aa1.46□□□□□ -2.18
CALCOCO2-226ENST00000575461 MYO15AQ9UKN7 3530 aa1.45□□□□□ -2.18
CALCOCO2-226ENST00000575461 VAMP8Q9BV40 100 aa1.45□□□□□ -2.18
CALCOCO2-226ENST00000575461 ANKRD26Q9UPS8 1709 aa1.44□□□□□ -2.18
CALCOCO2-226ENST00000575461 A0A0G2JND7 137 aa1.44□□□□□ -2.18
CALCOCO2-226ENST00000575461 TRGV9Q99603 122 aa1.44□□□□□ -2.18
CALCOCO2-226ENST00000575461 SMR3AQ99954 134 aa1.44□□□□□ -2.18
CALCOCO2-226ENST00000575461 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
CALCOCO2-226ENST00000575461 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
CALCOCO2-226ENST00000575461 F8P00451 2351 aa1.43□□□□□ -2.18
CALCOCO2-226ENST00000575461 BCE1O60756 84 aa1.43□□□□□ -2.18
CALCOCO2-226ENST00000575461 SERP2Q8N6R1 65 aa1.43□□□□□ -2.18
CALCOCO2-226ENST00000575461 TTC37Q6PGP7 1564 aa1.42□□□□□ -2.18
CALCOCO2-226ENST00000575461 PRRC2CQ9Y520 2896 aaKnown RBP1.42□□□□□ -2.18
CALCOCO2-226ENST00000575461 COL12A1Q99715 3063 aa1.42□□□□□ -2.18
CALCOCO2-226ENST00000575461 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
CALCOCO2-226ENST00000575461 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
CALCOCO2-226ENST00000575461 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
CALCOCO2-226ENST00000575461 LRBAP50851 2863 aa1.41□□□□□ -2.18
CALCOCO2-226ENST00000575461 NUP188Q5SRE5 1749 aa1.41□□□□□ -2.18
CALCOCO2-226ENST00000575461 PRO1933Q9H354 126 aa1.41□□□□□ -2.18
CALCOCO2-226ENST00000575461 SPENQ96T58 3664 aaKnown RBP1.41□□□□□ -2.18
CALCOCO2-226ENST00000575461 TRBV25-1A0A075B6N4 114 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 H7BZZ5 65 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 C10orf113Q5VZT2 155 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 PRO3102Q9H379 93 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 PRO0255Q9UI72 69 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 DMXL1Q9Y485 3027 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 FREM2Q5SZK8 3169 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 STAB2Q8WWQ8 2551 aa1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 TROQ12816 1431 aaPredicted RBP1.4□□□□□ -2.19
CALCOCO2-226ENST00000575461 APCP25054 2843 aa1.39□□□□□ -2.19
CALCOCO2-226ENST00000575461 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
CALCOCO2-226ENST00000575461 WNK1Q9H4A3 2382 aa1.39□□□□□ -2.19
CALCOCO2-226ENST00000575461 LINC00846Q9NV44 126 aa1.39□□□□□ -2.19
CALCOCO2-226ENST00000575461 LAMC1P11047 1609 aa1.39□□□□□ -2.19
CALCOCO2-226ENST00000575461 NIPBLQ6KC79 2804 aaeCLIP1.39□□□□□ -2.19
CALCOCO2-226ENST00000575461 DOPEY2Q9Y3R5 2298 aa1.37□□□□□ -2.19
CALCOCO2-226ENST00000575461 SHPRHQ149N8 1683 aa1.37□□□□□ -2.19
CALCOCO2-226ENST00000575461 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
CALCOCO2-226ENST00000575461 PREX2Q70Z35 1606 aa1.37□□□□□ -2.19
CALCOCO2-226ENST00000575461 OTOGQ6ZRI0 2925 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 TULP4Q9NRJ4 1543 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 DSPP15924 2871 aaKnown RBP1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 TRBV6-1A0A0K0K1D8 114 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 TRBV7-7A0A0K0K1E9 115 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 UQCRHP07919 91 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 ASIPP42127 132 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 PDCD11Q14690 1871 aaKnown RBP1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 CACNA1CQ13936 2221 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 MAP3K4Q9Y6R4 1608 aa1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 DMBT1Q9UGM3 2413 aaPredicted RBP1.36□□□□□ -2.19
CALCOCO2-226ENST00000575461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 ARHGEF12Q9NZN5 1544 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 DMDP11532 3685 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 RGPD1P0DJD0 1748 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 GLI2P10070 1586 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 KRTAP20-1Q3LI63 56 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 PSMG4Q5JS54 123 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 TP53AIP1Q9HCN2 124 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 MAP3K1Q13233 1512 aa1.35□□□□□ -2.19
CALCOCO2-226ENST00000575461 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.19
CALCOCO2-226ENST00000575461 PTPRQQ9UMZ3 2332 aa1.34□□□□□ -2.19
CALCOCO2-226ENST00000575461 ITPR2Q14571 2701 aa1.34□□□□□ -2.19
CALCOCO2-226ENST00000575461 TARBP1Q13395 1621 aaKnown RBP1.34□□□□□ -2.19
CALCOCO2-226ENST00000575461 SYS1-DBNDD2H3BUS1 97 aa1.34□□□□□ -2.19
CALCOCO2-226ENST00000575461 CEP170BQ9Y4F5 1589 aaPredicted RBP1.34□□□□□ -2.2
CALCOCO2-226ENST00000575461 MYO7BQ6PIF6 2116 aa1.33□□□□□ -2.2
CALCOCO2-226ENST00000575461 CSMD2Q7Z408 3487 aa1.33□□□□□ -2.2
CALCOCO2-226ENST00000575461 FAUP35544 74 aaKnown RBP1.33□□□□□ -2.2
CALCOCO2-226ENST00000575461 USP32Q8NFA0 1604 aa1.33□□□□□ -2.2
CALCOCO2-226ENST00000575461 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
CALCOCO2-226ENST00000575461 TNCP24821 2201 aa1.32□□□□□ -2.2
CALCOCO2-226ENST00000575461 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
CALCOCO2-226ENST00000575461 PAPPA2Q9BXP8 1791 aa1.32□□□□□ -2.2
CALCOCO2-226ENST00000575461 KDM5DQ9BY66 1539 aa1.32□□□□□ -2.2
CALCOCO2-226ENST00000575461 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
CALCOCO2-226ENST00000575461 MARF1Q9Y4F3 1742 aaKnown RBP1.32□□□□□ -2.2
CALCOCO2-226ENST00000575461 C1orf167Q5SNV9 1468 aa1.31□□□□□ -2.2
CALCOCO2-226ENST00000575461 RAPGEF2Q9Y4G8 1499 aa1.31□□□□□ -2.2
CALCOCO2-226ENST00000575461 CHD7Q9P2D1 2997 aa1.31□□□□□ -2.2
CALCOCO2-226ENST00000575461 C7orf77A4D0Y5 90 aa1.31□□□□□ -2.2
CALCOCO2-226ENST00000575461 FDCSPQ8NFU4 85 aa1.31□□□□□ -2.2
CALCOCO2-226ENST00000575461 LINC01600Q96MT4 127 aa1.31□□□□□ -2.2
CALCOCO2-226ENST00000575461 CUBNO60494 3623 aa1.3□□□□□ -2.2
CALCOCO2-226ENST00000575461 SLIT1O75093 1534 aa1.3□□□□□ -2.2
CALCOCO2-226ENST00000575461 SONP18583 2426 aaKnown RBP1.3□□□□□ -2.2
CALCOCO2-226ENST00000575461 HIVEP1P15822 2718 aa1.3□□□□□ -2.2
CALCOCO2-226ENST00000575461 SVEP1Q4LDE5 3571 aa1.3□□□□□ -2.2
CALCOCO2-226ENST00000575461 DMXL2Q8TDJ6 3036 aa1.3□□□□□ -2.2
CALCOCO2-226ENST00000575461 KIAA0586Q9BVV6 1533 aa1.3□□□□□ -2.2
CALCOCO2-226ENST00000575461 CROCC2H7BZ55 1655 aa1.29□□□□□ -2.2
CALCOCO2-226ENST00000575461 UQCRHLA0A096LP55 91 aa1.29□□□□□ -2.2
CALCOCO2-226ENST00000575461 I3L2K1 104 aa1.29□□□□□ -2.2
CALCOCO2-226ENST00000575461 ATMQ13315 3056 aa1.29□□□□□ -2.2
CALCOCO2-226ENST00000575461 CSPG4Q6UVK1 2322 aa1.29□□□□□ -2.2
CALCOCO2-226ENST00000575461 POLA1P09884 1462 aaPredicted RBP1.29□□□□□ -2.2
CALCOCO2-226ENST00000575461 ABCA8O94911 1581 aa1.29□□□□□ -2.2
CALCOCO2-226ENST00000575461 TRIOO75962 3097 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms