RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 SPATA3Q8NHX4 192 aa8.63□□□□□ -1.03
PCDHGA9-201ENST00000573521 AGRNO00468 2067 aa8.63□□□□□ -1.03
PCDHGA9-201ENST00000573521 ELOF1P60002 83 aaKnown RBP8.63□□□□□ -1.03
PCDHGA9-201ENST00000573521 Q9BRP9 147 aa8.63□□□□□ -1.03
PCDHGA9-201ENST00000573521 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA9-201ENST00000573521 H0Y9P7 68 aa8.62□□□□□ -1.03
PCDHGA9-201ENST00000573521 Q6ZQT0 140 aa8.61□□□□□ -1.03
PCDHGA9-201ENST00000573521 LITAFQ99732 161 aa8.61□□□□□ -1.03
PCDHGA9-201ENST00000573521 NANOS2P60321 138 aaKnown RBP8.61□□□□□ -1.03
PCDHGA9-201ENST00000573521 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
PCDHGA9-201ENST00000573521 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
PCDHGA9-201ENST00000573521 PTPN13Q12923 2485 aa8.6□□□□□ -1.03
PCDHGA9-201ENST00000573521 MYO9AB2RTY4 2548 aa8.6□□□□□ -1.03
PCDHGA9-201ENST00000573521 NOTCH2Q04721 2471 aa8.6□□□□□ -1.03
PCDHGA9-201ENST00000573521 CEP295Q9C0D2 2601 aa8.59□□□□□ -1.03
PCDHGA9-201ENST00000573521 Q6ZRU5 148 aa8.59□□□□□ -1.03
PCDHGA9-201ENST00000573521 SOSTDC1Q6X4U4 206 aa8.59□□□□□ -1.03
PCDHGA9-201ENST00000573521 A0A087WSZ3 146 aa8.58□□□□□ -1.04
PCDHGA9-201ENST00000573521 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
PCDHGA9-201ENST00000573521 PIEZO2Q9H5I5 2752 aa8.58□□□□□ -1.04
PCDHGA9-201ENST00000573521 SPTBN4Q9H254 2564 aa8.58□□□□□ -1.04
PCDHGA9-201ENST00000573521 Q6ZTC4 211 aa8.58□□□□□ -1.04
PCDHGA9-201ENST00000573521 FSHBP01225 129 aa8.57□□□□□ -1.04
PCDHGA9-201ENST00000573521 Q8NBF4 154 aa8.57□□□□□ -1.04
PCDHGA9-201ENST00000573521 ANKRD11Q6UB99 2663 aaPredicted RBP8.57□□□□□ -1.04
PCDHGA9-201ENST00000573521 SONP18583 2426 aaKnown RBP8.57□□□□□ -1.04
PCDHGA9-201ENST00000573521 DSPP15924 2871 aaKnown RBP8.56□□□□□ -1.04
PCDHGA9-201ENST00000573521 LOC400499M0QZD8 3231 aa8.55□□□□□ -1.04
PCDHGA9-201ENST00000573521 NHLRC4P0CG21 123 aaPredicted RBP8.55□□□□□ -1.04
PCDHGA9-201ENST00000573521 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
PCDHGA9-201ENST00000573521 IGLV9-49A0A0B4J1Y8 123 aa8.55□□□□□ -1.04
PCDHGA9-201ENST00000573521 FAM218AQ96MZ4 157 aa8.55□□□□□ -1.04
PCDHGA9-201ENST00000573521 SPINK6Q6UWN8 80 aa8.54□□□□□ -1.04
PCDHGA9-201ENST00000573521 PRR4Q16378 134 aa8.53□□□□□ -1.04
PCDHGA9-201ENST00000573521 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
PCDHGA9-201ENST00000573521 TRBV7-4A0A0J9YYF1 115 aa8.52□□□□□ -1.04
PCDHGA9-201ENST00000573521 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.04
PCDHGA9-201ENST00000573521 KIAA0087Q14695 138 aa8.52□□□□□ -1.05
PCDHGA9-201ENST00000573521 PTPRBP23467 1997 aa8.52□□□□□ -1.05
PCDHGA9-201ENST00000573521 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
PCDHGA9-201ENST00000573521 Q6ZRX8 168 aa8.52□□□□□ -1.05
PCDHGA9-201ENST00000573521 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
PCDHGA9-201ENST00000573521 BOD1L1Q8NFC6 3051 aa8.51□□□□□ -1.05
PCDHGA9-201ENST00000573521 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
PCDHGA9-201ENST00000573521 NBEAQ8NFP9 2946 aa8.51□□□□□ -1.05
PCDHGA9-201ENST00000573521 COL27A1Q8IZC6 1860 aaPredicted RBP8.51□□□□□ -1.05
PCDHGA9-201ENST00000573521 X6R8D5 127 aa8.51□□□□□ -1.05
PCDHGA9-201ENST00000573521 MGAQ8IWI9 3026 aa8.51□□□□□ -1.05
PCDHGA9-201ENST00000573521 HIVEP3Q5T1R4 2406 aa8.5□□□□□ -1.05
PCDHGA9-201ENST00000573521 KRTAP10-9P60411 292 aa8.5□□□□□ -1.05
PCDHGA9-201ENST00000573521 MYO18BQ8IUG5 2567 aa8.49□□□□□ -1.05
PCDHGA9-201ENST00000573521 CCDC168Q8NDH2 2452 aa8.49□□□□□ -1.05
PCDHGA9-201ENST00000573521 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
PCDHGA9-201ENST00000573521 KLKP1Q107X0 134 aa8.48□□□□□ -1.05
PCDHGA9-201ENST00000573521 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
PCDHGA9-201ENST00000573521 ASPMQ8IZT6 3477 aa8.47□□□□□ -1.05
PCDHGA9-201ENST00000573521 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
PCDHGA9-201ENST00000573521 ACYP2P14621 99 aa8.47□□□□□ -1.05
PCDHGA9-201ENST00000573521 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.05
PCDHGA9-201ENST00000573521 MOBPQ13875 183 aa8.46□□□□□ -1.06
PCDHGA9-201ENST00000573521 CHD8Q9HCK8 2581 aa8.45□□□□□ -1.06
PCDHGA9-201ENST00000573521 IGLV5-52A0A0A0MRZ9 124 aa8.44□□□□□ -1.06
PCDHGA9-201ENST00000573521 CFAP47Q6ZTR5 3102 aa8.43□□□□□ -1.06
PCDHGA9-201ENST00000573521 TRAV22A0A0B4J277 110 aa8.43□□□□□ -1.06
PCDHGA9-201ENST00000573521 LRCOL1A6NCL2 159 aa8.43□□□□□ -1.06
PCDHGA9-201ENST00000573521 VPREB1P12018 145 aa8.43□□□□□ -1.06
PCDHGA9-201ENST00000573521 KCNQ1DNQ9H478 68 aa8.42□□□□□ -1.06
PCDHGA9-201ENST00000573521 DMXL1Q9Y485 3027 aa8.42□□□□□ -1.06
PCDHGA9-201ENST00000573521 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
PCDHGA9-201ENST00000573521 PSPHP1O15172 72 aa8.42□□□□□ -1.06
PCDHGA9-201ENST00000573521 LINC00612Q8N6U2 182 aa8.42□□□□□ -1.06
PCDHGA9-201ENST00000573521 RETNQ9HD89 108 aa8.42□□□□□ -1.06
PCDHGA9-201ENST00000573521 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 MUC4Q99102 2169 aa8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 Q6ZRP5 223 aa8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 Q8NAQ8 132 aa8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 C8orf87E5RJ46 101 aa8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 DNAH10OSP0CZ25 163 aa8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
PCDHGA9-201ENST00000573521 CIRBP-AS1Q8TBR5 109 aa8.4□□□□□ -1.06
PCDHGA9-201ENST00000573521 ABCA2Q9BZC7 2435 aa8.4□□□□□ -1.06
PCDHGA9-201ENST00000573521 PRR34Q9NV39 138 aa8.4□□□□□ -1.06
PCDHGA9-201ENST00000573521 C1orf134Q5TEV5 83 aa8.4□□□□□ -1.07
PCDHGA9-201ENST00000573521 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.07
PCDHGA9-201ENST00000573521 PCOTHQ58A44 107 aa8.39□□□□□ -1.07
PCDHGA9-201ENST00000573521 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
PCDHGA9-201ENST00000573521 PRLHP81277 87 aa8.38□□□□□ -1.07
PCDHGA9-201ENST00000573521 AKAP13Q12802 2813 aa8.38□□□□□ -1.07
PCDHGA9-201ENST00000573521 USP9XQ93008 2570 aaPredicted RBP8.37□□□□□ -1.07
PCDHGA9-201ENST00000573521 CSNK1G2-AS1Q8NCQ2 148 aa8.37□□□□□ -1.07
PCDHGA9-201ENST00000573521 PKD1L2Q7Z442 2459 aa8.37□□□□□ -1.07
PCDHGA9-201ENST00000573521 LAMA5O15230 3695 aa8.36□□□□□ -1.07
PCDHGA9-201ENST00000573521 A8MWP4 228 aa8.36□□□□□ -1.07
PCDHGA9-201ENST00000573521 TLX1NBP0CAT3 122 aa8.36□□□□□ -1.07
PCDHGA9-201ENST00000573521 ZNF292O60281 2723 aa8.36□□□□□ -1.07
PCDHGA9-201ENST00000573521 TM2D3Q9BRN9 247 aa8.35□□□□□ -1.07
PCDHGA9-201ENST00000573521 ZFHX4Q86UP3 3567 aa8.35□□□□□ -1.07
PCDHGA9-201ENST00000573521 Q9UF83 564 aa8.35□□□□□ -1.07
PCDHGA9-201ENST00000573521 A0A1B0GU69 56 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms