RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 RAB5BP61020 215 aa7.5□□□□□ -1.21
CTDNEP1-205ENST00000570828 PDZD11Q5EBL8 140 aa7.5□□□□□ -1.21
CTDNEP1-205ENST00000570828 COX7B2Q8TF08 81 aa7.5□□□□□ -1.21
CTDNEP1-205ENST00000570828 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
CTDNEP1-205ENST00000570828 CARHSP1Q9Y2V2 147 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-205ENST00000570828 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
CTDNEP1-205ENST00000570828 PRYO14603 147 aa7.49□□□□□ -1.21
CTDNEP1-205ENST00000570828 PMVKQ15126 192 aa7.49□□□□□ -1.21
CTDNEP1-205ENST00000570828 C10orf91Q5T1B1 145 aa7.49□□□□□ -1.21
CTDNEP1-205ENST00000570828 C22orf24Q9Y442 160 aa7.49□□□□□ -1.21
CTDNEP1-205ENST00000570828 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
CTDNEP1-205ENST00000570828 SPINK8P0C7L1 97 aa7.48□□□□□ -1.21
CTDNEP1-205ENST00000570828 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
CTDNEP1-205ENST00000570828 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
CTDNEP1-205ENST00000570828 H3BRM9 83 aa7.47□□□□□ -1.21
CTDNEP1-205ENST00000570828 NUPR1O60356 82 aa7.47□□□□□ -1.21
CTDNEP1-205ENST00000570828 AKR1D1P51857 326 aa7.47□□□□□ -1.21
CTDNEP1-205ENST00000570828 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
CTDNEP1-205ENST00000570828 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
CTDNEP1-205ENST00000570828 MRPL55Q7Z7F7 128 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-205ENST00000570828 TRAPPC1Q9Y5R8 145 aa7.46□□□□□ -1.22
CTDNEP1-205ENST00000570828 ATP5LO75964 103 aa7.45□□□□□ -1.22
CTDNEP1-205ENST00000570828 NDUFA6P56556 154 aa7.45□□□□□ -1.22
CTDNEP1-205ENST00000570828 C12orf57Q99622 126 aa7.45□□□□□ -1.22
CTDNEP1-205ENST00000570828 PCP4L1A6NKN8 68 aa7.44□□□□□ -1.22
CTDNEP1-205ENST00000570828 ZNF861PO60384 105 aa7.44□□□□□ -1.22
CTDNEP1-205ENST00000570828 HBDP02042 147 aa7.44□□□□□ -1.22
CTDNEP1-205ENST00000570828 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
CTDNEP1-205ENST00000570828 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
CTDNEP1-205ENST00000570828 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
CTDNEP1-205ENST00000570828 A0A096LNJ9 63 aa7.43□□□□□ -1.22
CTDNEP1-205ENST00000570828 LINC00614P0C842 121 aa7.43□□□□□ -1.22
CTDNEP1-205ENST00000570828 RPL13AP40429 203 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-205ENST00000570828 BCE1O60756 84 aa7.42□□□□□ -1.22
CTDNEP1-205ENST00000570828 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-205ENST00000570828 NKAPP1Q8N9T2 125 aa7.42□□□□□ -1.22
CTDNEP1-205ENST00000570828 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
CTDNEP1-205ENST00000570828 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
CTDNEP1-205ENST00000570828 PMCHL1Q16048 86 aa7.41□□□□□ -1.22
CTDNEP1-205ENST00000570828 URB1-AS1Q96HZ7 61 aa7.41□□□□□ -1.22
CTDNEP1-205ENST00000570828 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
CTDNEP1-205ENST00000570828 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-205ENST00000570828 PFN2P35080 140 aa7.4□□□□□ -1.22
CTDNEP1-205ENST00000570828 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
CTDNEP1-205ENST00000570828 SNRPEP62304 92 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-205ENST00000570828 BAGE3Q86Y29 109 aa7.39□□□□□ -1.23
CTDNEP1-205ENST00000570828 C11orf86A6NJI1 115 aa7.38□□□□□ -1.23
CTDNEP1-205ENST00000570828 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
CTDNEP1-205ENST00000570828 SFTA2Q6UW10 78 aa7.38□□□□□ -1.23
CTDNEP1-205ENST00000570828 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
CTDNEP1-205ENST00000570828 UBE2AP49459 152 aa7.37□□□□□ -1.23
CTDNEP1-205ENST00000570828 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
CTDNEP1-205ENST00000570828 IGKV2-28A0A075B6P5 120 aa7.36□□□□□ -1.23
CTDNEP1-205ENST00000570828 IGKV2D-28P01615 120 aa7.36□□□□□ -1.23
CTDNEP1-205ENST00000570828 COX17Q14061 63 aa7.36□□□□□ -1.23
CTDNEP1-205ENST00000570828 ZNF625Q96I27 306 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-205ENST00000570828 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
CTDNEP1-205ENST00000570828 S100A2P29034 98 aa7.35□□□□□ -1.23
CTDNEP1-205ENST00000570828 CHCHD1Q96BP2 118 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-205ENST00000570828 CRYGAP11844 174 aa7.34□□□□□ -1.23
CTDNEP1-205ENST00000570828 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.23
CTDNEP1-205ENST00000570828 IFI27L1Q96BM0 104 aa7.33□□□□□ -1.24
CTDNEP1-205ENST00000570828 YPEL4Q96NS1 127 aa7.33□□□□□ -1.24
CTDNEP1-205ENST00000570828 LPAP08519 4548 aa7.32□□□□□ -1.24
CTDNEP1-205ENST00000570828 A0A087X002 238 aa7.32□□□□□ -1.24
CTDNEP1-205ENST00000570828 TRAV12-1A0A0B4J245 112 aa7.32□□□□□ -1.24
CTDNEP1-205ENST00000570828 UBE2V1Q13404 147 aa7.32□□□□□ -1.24
CTDNEP1-205ENST00000570828 PRR4Q16378 134 aa7.32□□□□□ -1.24
CTDNEP1-205ENST00000570828 GAGE2AQ6NT46 116 aa7.32□□□□□ -1.24
CTDNEP1-205ENST00000570828 KRTAP13-1Q8IUC0 172 aa7.32□□□□□ -1.24
CTDNEP1-205ENST00000570828 LINC00158P58513 81 aa7.31□□□□□ -1.24
CTDNEP1-205ENST00000570828 CBLN2Q8IUK8 224 aa7.31□□□□□ -1.24
CTDNEP1-205ENST00000570828 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
CTDNEP1-205ENST00000570828 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
CTDNEP1-205ENST00000570828 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
CTDNEP1-205ENST00000570828 COLCA2A8K830 154 aa7.3□□□□□ -1.24
CTDNEP1-205ENST00000570828 HSBP1O75506 76 aa7.3□□□□□ -1.24
CTDNEP1-205ENST00000570828 PRLHP81277 87 aa7.3□□□□□ -1.24
CTDNEP1-205ENST00000570828 FAM19A1Q7Z5A9 133 aa7.3□□□□□ -1.24
CTDNEP1-205ENST00000570828 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
CTDNEP1-205ENST00000570828 TSPAN13O95857 204 aa7.29□□□□□ -1.24
CTDNEP1-205ENST00000570828 SEC61GP60059 68 aa7.29□□□□□ -1.24
CTDNEP1-205ENST00000570828 HERV-K104P63124 156 aa7.29□□□□□ -1.24
CTDNEP1-205ENST00000570828 ANAPC11Q9NYG5 84 aa7.29□□□□□ -1.24
CTDNEP1-205ENST00000570828 TSTD3H0UI37 97 aa7.28□□□□□ -1.24
CTDNEP1-205ENST00000570828 M0R378 163 aa7.28□□□□□ -1.24
CTDNEP1-205ENST00000570828 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
CTDNEP1-205ENST00000570828 Q8NDZ9 215 aa7.28□□□□□ -1.24
CTDNEP1-205ENST00000570828 MEIG1Q5JSS6 88 aa7.27□□□□□ -1.25
CTDNEP1-205ENST00000570828 FAM19A2Q8N3H0 131 aa7.27□□□□□ -1.25
CTDNEP1-205ENST00000570828 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
CTDNEP1-205ENST00000570828 IGKV2D-26A0A0A0MRZ7 120 aa7.25□□□□□ -1.25
CTDNEP1-205ENST00000570828 TRGC2P03986 189 aa7.25□□□□□ -1.25
CTDNEP1-205ENST00000570828 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
CTDNEP1-205ENST00000570828 KRTAP13-2Q52LG2 175 aa7.25□□□□□ -1.25
CTDNEP1-205ENST00000570828 LINC00587B1AMM8 73 aa7.24□□□□□ -1.25
CTDNEP1-205ENST00000570828 BOD1L2Q8IYS8 172 aa7.24□□□□□ -1.25
CTDNEP1-205ENST00000570828 MIR7-3HGQ8N6C7 128 aa7.24□□□□□ -1.25
CTDNEP1-205ENST00000570828 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
CTDNEP1-205ENST00000570828 NDUFA12Q9UI09 145 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms