RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 MGAQ8IWI9 3026 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 F8VRH5 84 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 I3L3M4 83 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 NUPR1O60356 82 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 IGLC3P0DOY3 106 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 SEC11AP67812 179 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 HSD52Q0P140 79 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 DEFB114Q30KQ6 69 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 COPS9Q8WXC6 57 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 LINC00467Q9BRT7 94 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 CACNA1AO00555 2505 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 AKAP6Q13023 2319 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 DOPEY1Q5JWR5 2465 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 PKD1L2Q7Z442 2459 aa1.9□□□□□ -2.11
CNOT1-209ENST00000566240 ANKRD17O75179 2603 aaKnown RBP1.89□□□□□ -2.11
CNOT1-209ENST00000566240 PIEZO1Q92508 2521 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 A0A087WX48 190 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 TRGV1A0A0A0MS02 117 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 TRAV12-1A0A0B4J245 112 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 TRBV10-1A0A0K0K1A3 114 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 LINC01546A6NGU7 62 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 H3BRM9 83 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 COX8AP10176 69 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 RNASE3P12724 160 aaKnown RBP1.89□□□□□ -2.11
CNOT1-209ENST00000566240 TMEM170BQ5T4T1 132 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 GTF2H5Q6ZYL4 71 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
CNOT1-209ENST00000566240 C14orf144Q96I85 54 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 C14orf132Q9NPU4 83 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 SPANXA1Q9NS26 97 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 NCOR2Q9Y618 2525 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 ATMQ13315 3056 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 SPTBN4Q9H254 2564 aa1.89□□□□□ -2.11
CNOT1-209ENST00000566240 CEP295Q9C0D2 2601 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 NBASA2RRP1 2371 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 BOD1L1Q8NFC6 3051 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 CFAP47Q6ZTR5 3102 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 TRBV25-1A0A075B6N4 114 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 TRBV27A0A0K0K1C4 114 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 ZNF815PA8K554 130 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 A8MTW9 85 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 DLEU1O43261 78 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 IGLV1-51P01701 117 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 DEFB1P60022 68 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 PLEKHB2Q96CS7 222 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 ABCA1O95477 2261 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 DOPEY2Q9Y3R5 2298 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 DCHS1Q96JQ0 3298 aa1.88□□□□□ -2.11
CNOT1-209ENST00000566240 SORL1Q92673 2214 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 TRBV7-3A0A075B6L6 115 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 MYMXA0A1B0GTQ4 84 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 A0A1B0GV72 72 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 A0A1B0GV90 55 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 M0QY20 66 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 ZNF25P17030 456 aaPredicted RBP1.87□□□□□ -2.11
CNOT1-209ENST00000566240 CIRBPQ14011 172 aaKnown RBP1.87□□□□□ -2.11
CNOT1-209ENST00000566240 SFTA2Q6UW10 78 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 C15orf53Q8NAA6 179 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 SNHG12Q9BXW3 62 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 CYSTM1Q9H1C7 97 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 MRPL35Q9NZE8 188 aaKnown RBP1.87□□□□□ -2.11
CNOT1-209ENST00000566240 HIGD1BQ9P298 99 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 DMXL2Q8TDJ6 3036 aa1.87□□□□□ -2.11
CNOT1-209ENST00000566240 ACACBO00763 2458 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 MED13LQ71F56 2210 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.86□□□□□ -2.11
CNOT1-209ENST00000566240 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 J3QR89 54 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 SMIM13P0DJ93 91 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 FABP2P12104 132 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 POLR2KP53803 58 aaKnown RBP1.86□□□□□ -2.11
CNOT1-209ENST00000566240 BVES-AS1Q5T3Y7 98 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 CFAP126Q5VTH2 177 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 RAB37Q96AX2 223 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 NOP10Q9NPE3 64 aaKnown RBP1.86□□□□□ -2.11
CNOT1-209ENST00000566240 FAM208BQ5VWN6 2430 aa1.86□□□□□ -2.11
CNOT1-209ENST00000566240 HRNRQ86YZ3 2850 aaPredicted RBP1.85□□□□□ -2.11
CNOT1-209ENST00000566240 MUC4Q99102 2169 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 CHD8Q9HCK8 2581 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 USP24Q9UPU5 2620 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 IGIPA6NJ69 53 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 COX6CP09669 75 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 SPART-AS1P0CW21 52 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 DEFB130BP0DP73 79 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 DEFB130AP0DP74 79 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 RPL39P62891 51 aaKnown RBP1.85□□□□□ -2.11
CNOT1-209ENST00000566240 MRPS36P82909 103 aaKnown RBP1.85□□□□□ -2.11
CNOT1-209ENST00000566240 DEFB135Q30KP9 77 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 MEIG1Q5JSS6 88 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.85□□□□□ -2.11
CNOT1-209ENST00000566240 SMR3AQ99954 134 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 PRRC2CQ9Y520 2896 aaKnown RBP1.85□□□□□ -2.11
CNOT1-209ENST00000566240 ADGRG4Q8IZF6 3080 aa1.85□□□□□ -2.11
CNOT1-209ENST00000566240 DSPP15924 2871 aaKnown RBP1.84□□□□□ -2.11
CNOT1-209ENST00000566240 CREBBPQ92793 2442 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.84□□□□□ -2.11
CNOT1-209ENST00000566240 IGHV1-58A0A0C4DH39 117 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 IGKV2-29A2NJV5 120 aaPredicted RBP1.84□□□□□ -2.11
CNOT1-209ENST00000566240 TMEM262E9PQX1 116 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 H3BUT2 72 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms