RNA–Protein interactions for RNA: ENST00000565910.5

ETFA-220, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-220ENST00000565910 VWFP04275 2813 aa0.19□□□□□ -2.38
ETFA-220ENST00000565910 KIF20BQ96Q89 1820 aa0.18□□□□□ -2.38
ETFA-220ENST00000565910 IQCF6A8MYZ5 107 aa0.18□□□□□ -2.38
ETFA-220ENST00000565910 HMGN2P05204 90 aaKnown RBP0.18□□□□□ -2.38
ETFA-220ENST00000565910 S100A16Q96FQ6 103 aaKnown RBP0.18□□□□□ -2.38
ETFA-220ENST00000565910 USMG5Q96IX5 58 aa0.18□□□□□ -2.38
ETFA-220ENST00000565910 RGPD2P0DJD1 1756 aa0.18□□□□□ -2.38
ETFA-220ENST00000565910 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
ETFA-220ENST00000565910 RGPD1P0DJD0 1748 aa0.18□□□□□ -2.38
ETFA-220ENST00000565910 NKTRP30414 1462 aaKnown RBP0.17□□□□□ -2.38
ETFA-220ENST00000565910 CPSF4LA6NMK7 179 aaKnown RBP0.17□□□□□ -2.38
ETFA-220ENST00000565910 PRM1P04553 51 aa0.17□□□□□ -2.38
ETFA-220ENST00000565910 HMGN3Q15651 99 aa0.17□□□□□ -2.38
ETFA-220ENST00000565910 ABCC3O15438 1527 aa0.17□□□□□ -2.38
ETFA-220ENST00000565910 COL14A1Q05707 1796 aaKnown RBP0.17□□□□□ -2.38
ETFA-220ENST00000565910 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
ETFA-220ENST00000565910 TMEM131LA2VDJ0 1609 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 ALKQ9UM73 1620 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 LRRC37AA6NMS7 1700 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 COX8AP10176 69 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 TDRG1Q3Y452 100 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 NMSQ5H8A3 153 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 LELP1Q5T871 98 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 LRRC7Q96NW7 1537 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 IQSEC2Q5JU85 1478 aa0.16□□□□□ -2.38
ETFA-220ENST00000565910 I3L3M4 83 aa0.15□□□□□ -2.39
ETFA-220ENST00000565910 PYY3Q5JQD4 70 aa0.15□□□□□ -2.39
ETFA-220ENST00000565910 KIF14Q15058 1648 aa0.15□□□□□ -2.39
ETFA-220ENST00000565910 MYCBP2O75592 4640 aa0.15□□□□□ -2.39
ETFA-220ENST00000565910 PRKDCP78527 4128 aaKnown RBP0.15□□□□□ -2.39
ETFA-220ENST00000565910 LPAP08519 4548 aa0.14□□□□□ -2.39
ETFA-220ENST00000565910 SPTY2D1-AS1A0A0U1RR47 76 aa0.14□□□□□ -2.39
ETFA-220ENST00000565910 SMIM11AP58511 58 aa0.14□□□□□ -2.39
ETFA-220ENST00000565910 H1FX-AS1Q4G0G2 97 aa0.14□□□□□ -2.39
ETFA-220ENST00000565910 HMCN2Q8NDA2 5059 aa0.14□□□□□ -2.39
ETFA-220ENST00000565910 CSPG4Q6UVK1 2322 aa0.14□□□□□ -2.39
ETFA-220ENST00000565910 PVALEFA0A1B0GWK0 134 aa0.13□□□□□ -2.39
ETFA-220ENST00000565910 LOC730098B7Z3J9 87 aa0.13□□□□□ -2.39
ETFA-220ENST00000565910 ZNF831Q5JPB2 1677 aa0.13□□□□□ -2.39
ETFA-220ENST00000565910 PPLO60437 1756 aa0.13□□□□□ -2.39
ETFA-220ENST00000565910 TENM4Q6N022 2769 aa0.13□□□□□ -2.39
ETFA-220ENST00000565910 ABCA2Q9BZC7 2435 aa0.13□□□□□ -2.39
ETFA-220ENST00000565910 ALMS1Q8TCU4 4167 aa0.12□□□□□ -2.39
ETFA-220ENST00000565910 CACNA1AO00555 2505 aa0.12□□□□□ -2.39
ETFA-220ENST00000565910 CCDC141Q6ZP82 1450 aa0.12□□□□□ -2.39
ETFA-220ENST00000565910 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
ETFA-220ENST00000565910 PLIN4Q96Q06 1357 aa0.12□□□□□ -2.39
ETFA-220ENST00000565910 PLGLAQ15195 96 aa0.12□□□□□ -2.39
ETFA-220ENST00000565910 MRPL34Q9BQ48 92 aaKnown RBP0.12□□□□□ -2.39
ETFA-220ENST00000565910 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
ETFA-220ENST00000565910 SUPT6HQ7KZ85 1726 aaKnown RBP0.12□□□□□ -2.39
ETFA-220ENST00000565910 HSPG2P98160 4391 aa0.11□□□□□ -2.39
ETFA-220ENST00000565910 ATP7BP35670 1465 aa0.11□□□□□ -2.39
ETFA-220ENST00000565910 MYMXA0A1B0GTQ4 84 aa0.11□□□□□ -2.39
ETFA-220ENST00000565910 ALKAL2Q6UX46 152 aa0.11□□□□□ -2.39
ETFA-220ENST00000565910 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
ETFA-220ENST00000565910 PKD1L1Q8TDX9 2849 aa0.11□□□□□ -2.39
ETFA-220ENST00000565910 RB1CC1Q8TDY2 1594 aa0.11□□□□□ -2.39
ETFA-220ENST00000565910 QSER1Q2KHR3 1735 aa0.1□□□□□ -2.39
ETFA-220ENST00000565910 ATRQ13535 2644 aa0.1□□□□□ -2.39
ETFA-220ENST00000565910 GPR98Q8WXG9 6306 aa0.1□□□□□ -2.39
ETFA-220ENST00000565910 BCORQ6W2J9 1755 aa0.1□□□□□ -2.39
ETFA-220ENST00000565910 A0A1B0GUT8 65 aa0.1□□□□□ -2.39
ETFA-220ENST00000565910 MAGI2Q86UL8 1455 aa0.1□□□□□ -2.39
ETFA-220ENST00000565910 MAP3K4Q9Y6R4 1608 aa0.09□□□□□ -2.39
ETFA-220ENST00000565910 PTPN13Q12923 2485 aa0.09□□□□□ -2.39
ETFA-220ENST00000565910 COX7BP24311 80 aa0.09□□□□□ -2.4
ETFA-220ENST00000565910 HEPN1Q6WQI6 88 aa0.09□□□□□ -2.4
ETFA-220ENST00000565910 HECTD4Q9Y4D8 3996 aa0.09□□□□□ -2.4
ETFA-220ENST00000565910 UBR3Q6ZT12 1888 aa0.09□□□□□ -2.4
ETFA-220ENST00000565910 SPINK4O60575 86 aa0.08□□□□□ -2.4
ETFA-220ENST00000565910 SNRPFP62306 86 aaKnown RBP0.08□□□□□ -2.4
ETFA-220ENST00000565910 GAFA1Q96PS6 74 aa0.08□□□□□ -2.4
ETFA-220ENST00000565910 POLR1AO95602 1720 aaPredicted RBP0.07□□□□□ -2.4
ETFA-220ENST00000565910 DIP2BQ9P265 1576 aa0.07□□□□□ -2.4
ETFA-220ENST00000565910 UACAQ9BZF9 1416 aa0.07□□□□□ -2.4
ETFA-220ENST00000565910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.07□□□□□ -2.44e-11■■■■□ 20.4
ETFA-220ENST00000565910 USP32Q8NFA0 1604 aa0.07□□□□□ -2.4
ETFA-220ENST00000565910 TRAV21A0A0B4J279 112 aa0.07□□□□□ -2.4
ETFA-220ENST00000565910 LINC00643Q86TS7 51 aa0.07□□□□□ -2.4
ETFA-220ENST00000565910 WFDC9Q8NEX5 89 aa0.07□□□□□ -2.4
ETFA-220ENST00000565910 SPTA1P02549 2419 aa0.06□□□□□ -2.4
ETFA-220ENST00000565910 MED14O60244 1454 aa0.06□□□□□ -2.4
ETFA-220ENST00000565910 CEBPZOSA8MTT3 80 aa0.06□□□□□ -2.4
ETFA-220ENST00000565910 PREX1Q8TCU6 1659 aa0.05□□□□□ -2.4
ETFA-220ENST00000565910 LTN1O94822 1766 aa0.05□□□□□ -2.4
ETFA-220ENST00000565910 DOT1LQ8TEK3 1739 aa0.04□□□□□ -2.4
ETFA-220ENST00000565910 NCOA2Q15596 1464 aa0.03□□□□□ -2.4
ETFA-220ENST00000565910 CCDC18Q5T9S5 1454 aa0.03□□□□□ -2.4
ETFA-220ENST00000565910 SPRR2DP22532 72 aa0.03□□□□□ -2.4
ETFA-220ENST00000565910 FLNCQ14315 2725 aa0.03□□□□□ -2.4
ETFA-220ENST00000565910 LRRC9Q6ZRR7 1453 aa0.03□□□□□ -2.41
ETFA-220ENST00000565910 MAP1BP46821 2468 aaKnown RBP0.03□□□□□ -2.41
ETFA-220ENST00000565910 REV3LO60673 3130 aa0.02□□□□□ -2.41
ETFA-220ENST00000565910 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
ETFA-220ENST00000565910 WFDC13Q8IUB5 93 aa0.02□□□□□ -2.41
ETFA-220ENST00000565910 RABAC1Q9UI14 185 aa0.02□□□□□ -2.41
ETFA-220ENST00000565910 PIK3C2BO00750 1634 aa0.02□□□□□ -2.41
ETFA-220ENST00000565910 CCL22O00626 93 aa0.01□□□□□ -2.41
ETFA-220ENST00000565910 NSD1Q96L73 2696 aaPredicted RBP0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms