RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CSNK1G2-AS1Q8NCQ2 148 aa14.06□□□□□ -0.16
MAP1LC3B-206ENST00000564844 TRAV10A0A0B4J240 114 aa14.06□□□□□ -0.16
MAP1LC3B-206ENST00000564844 F8P00451 2351 aa14.05□□□□□ -0.16
MAP1LC3B-206ENST00000564844 LINC00482Q8N8I6 264 aa14.05□□□□□ -0.16
MAP1LC3B-206ENST00000564844 UNQ6190/PRO20217Q6UXQ8 127 aa14.05□□□□□ -0.16
MAP1LC3B-206ENST00000564844 ZNF843Q8N446 348 aa14.05□□□□□ -0.16
MAP1LC3B-206ENST00000564844 LINC01006Q8NI28 216 aa14.05□□□□□ -0.16
MAP1LC3B-206ENST00000564844 RBM3P98179 157 aaKnown RBP14.04□□□□□ -0.16
MAP1LC3B-206ENST00000564844 Q8IZM0 81 aa14.04□□□□□ -0.16
MAP1LC3B-206ENST00000564844 CHCHD10Q8WYQ3 142 aaPredicted RBP14.04□□□□□ -0.16
MAP1LC3B-206ENST00000564844 PKD1L1Q8TDX9 2849 aa14.03□□□□□ -0.16
MAP1LC3B-206ENST00000564844 Q6ZQY7 126 aa14.02□□□□□ -0.16
MAP1LC3B-206ENST00000564844 Q5XG85 94 aa14.02□□□□□ -0.17
MAP1LC3B-206ENST00000564844 XAGE1AQ9HD64 81 aa14.02□□□□□ -0.17
MAP1LC3B-206ENST00000564844 C19orf73Q9NVV2 129 aa14.02□□□□□ -0.17
MAP1LC3B-206ENST00000564844 RMI2Q96E14 147 aa14.01□□□□□ -0.17
MAP1LC3B-206ENST00000564844 KIAA0087Q14695 138 aa14.01□□□□□ -0.17
MAP1LC3B-206ENST00000564844 SMR3AQ99954 134 aa13.99□□□□□ -0.17
MAP1LC3B-206ENST00000564844 LINC01547P58512 204 aaPredicted RBP13.98□□□□□ -0.17
MAP1LC3B-206ENST00000564844 REG3AQ06141 175 aa13.98□□□□□ -0.17
MAP1LC3B-206ENST00000564844 LINC00575Q6W349 94 aa13.98□□□□□ -0.17
MAP1LC3B-206ENST00000564844 Q6ZQT0 140 aa13.97□□□□□ -0.17
MAP1LC3B-206ENST00000564844 FAM236DA0A1B0GTK5 79 aa13.96□□□□□ -0.17
MAP1LC3B-206ENST00000564844 FAM236CP0DP71 79 aa13.96□□□□□ -0.17
MAP1LC3B-206ENST00000564844 LINC00167Q96N53 147 aa13.96□□□□□ -0.17
MAP1LC3B-206ENST00000564844 Q6ZVQ6 151 aa13.96□□□□□ -0.18
MAP1LC3B-206ENST00000564844 TRRAPQ9Y4A5 3859 aa13.95□□□□□ -0.18
MAP1LC3B-206ENST00000564844 PRO0628Q9UI54 55 aa13.95□□□□□ -0.18
MAP1LC3B-206ENST00000564844 DEFB135Q30KP9 77 aa13.95□□□□□ -0.18
MAP1LC3B-206ENST00000564844 IGLV1-51P01701 117 aa13.94□□□□□ -0.18
MAP1LC3B-206ENST00000564844 LINC00336Q6ZUF6 198 aa13.94□□□□□ -0.18
MAP1LC3B-206ENST00000564844 Q8N9L7 120 aa13.94□□□□□ -0.18
MAP1LC3B-206ENST00000564844 CD164L2Q6UWJ8 174 aa13.94□□□□□ -0.18
MAP1LC3B-206ENST00000564844 V9GYY9 64 aa13.93□□□□□ -0.18
MAP1LC3B-206ENST00000564844 PRO0255Q9UI72 69 aa13.92□□□□□ -0.18
MAP1LC3B-206ENST00000564844 SPAG11BQ08648 103 aa13.92□□□□□ -0.18
MAP1LC3B-206ENST00000564844 CYSRT1A8MQ03 144 aa13.91□□□□□ -0.18
MAP1LC3B-206ENST00000564844 H7BZZ5 65 aa13.91□□□□□ -0.18
MAP1LC3B-206ENST00000564844 NDUFC2O95298 119 aa13.91□□□□□ -0.18
MAP1LC3B-206ENST00000564844 A0A1B0GUV1 79 aa13.91□□□□□ -0.18
MAP1LC3B-206ENST00000564844 F8WEM9 126 aa13.91□□□□□ -0.18
MAP1LC3B-206ENST00000564844 ATP5EP2Q5VTU8 51 aa13.91□□□□□ -0.18
MAP1LC3B-206ENST00000564844 TM2D3Q9BRN9 247 aa13.9□□□□□ -0.18
MAP1LC3B-206ENST00000564844 OTOGQ6ZRI0 2925 aa13.9□□□□□ -0.18
MAP1LC3B-206ENST00000564844 TRBV10-3A0A0K0K1G6 114 aa13.9□□□□□ -0.18
MAP1LC3B-206ENST00000564844 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
MAP1LC3B-206ENST00000564844 BAHCC1Q9P281 2608 aa13.89□□□□□ -0.19
MAP1LC3B-206ENST00000564844 ZNF561-AS1K7EIQ3 104 aa13.89□□□□□ -0.19
MAP1LC3B-206ENST00000564844 LYPD5Q6UWN5 251 aa13.89□□□□□ -0.19
MAP1LC3B-206ENST00000564844 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.88□□□□□ -0.19
MAP1LC3B-206ENST00000564844 KRTAP1-3Q8IUG1 177 aa13.86□□□□□ -0.19
MAP1LC3B-206ENST00000564844 TRAV7A0A075B6U4 112 aa13.85□□□□□ -0.19
MAP1LC3B-206ENST00000564844 A0A0U1RQV1 116 aa13.85□□□□□ -0.19
MAP1LC3B-206ENST00000564844 LINC00474Q9P2X8 69 aa13.84□□□□□ -0.19
MAP1LC3B-206ENST00000564844 X6R8D5 127 aa13.84□□□□□ -0.19
MAP1LC3B-206ENST00000564844 NOTCH1P46531 2555 aa13.84□□□□□ -0.19
MAP1LC3B-206ENST00000564844 COX17Q14061 63 aa13.84□□□□□ -0.19
MAP1LC3B-206ENST00000564844 HIGD2BQ4VC39 106 aa13.84□□□□□ -0.19
MAP1LC3B-206ENST00000564844 MUC7Q8TAX7 377 aa13.83□□□□□ -0.2
MAP1LC3B-206ENST00000564844 CMC4P56277 68 aaPredicted RBP13.82□□□□□ -0.2
MAP1LC3B-206ENST00000564844 DAD1P61803 113 aa13.81□□□□□ -0.2
MAP1LC3B-206ENST00000564844 CELA1Q9UNI1 258 aa13.79□□□□□ -0.2
MAP1LC3B-206ENST00000564844 FLNBO75369 2602 aaKnown RBP13.79□□□□□ -0.2
MAP1LC3B-206ENST00000564844 IGHV4-28A0A0C4DH34 117 aa13.78□□□□□ -0.2
MAP1LC3B-206ENST00000564844 DEFB105AQ8NG35 78 aa13.77□□□□□ -0.21
MAP1LC3B-206ENST00000564844 DIRC1Q969H9 104 aa13.77□□□□□ -0.21
MAP1LC3B-206ENST00000564844 MAST4O15021 2626 aa13.77□□□□□ -0.21
MAP1LC3B-206ENST00000564844 LOC110117498A0A087WWA1 95 aa13.77□□□□□ -0.21
MAP1LC3B-206ENST00000564844 C3orf84H3BNL1 204 aa13.76□□□□□ -0.21
MAP1LC3B-206ENST00000564844 IGLV6-57P01721 117 aa13.76□□□□□ -0.21
MAP1LC3B-206ENST00000564844 NDUFC2-KCTD14E9PQ53 114 aa13.76□□□□□ -0.21
MAP1LC3B-206ENST00000564844 C1orf195Q5TG92 126 aa13.76□□□□□ -0.21
MAP1LC3B-206ENST00000564844 C6orf48Q9UBA6 75 aa13.75□□□□□ -0.21
MAP1LC3B-206ENST00000564844 FBN1P35555 2871 aaKnown RBP13.75□□□□□ -0.21
MAP1LC3B-206ENST00000564844 ZNF73O43830 326 aaPredicted RBP13.75□□□□□ -0.21
MAP1LC3B-206ENST00000564844 SERP1Q9Y6X1 66 aa13.75□□□□□ -0.21
MAP1LC3B-206ENST00000564844 BPY2O14599 106 aa13.75□□□□□ -0.21
MAP1LC3B-206ENST00000564844 MPLKIPQ8TAP9 179 aa13.74□□□□□ -0.21
MAP1LC3B-206ENST00000564844 NBEAL1Q6ZS30 2694 aa13.74□□□□□ -0.21
MAP1LC3B-206ENST00000564844 KRTAP10-3P60369 221 aa13.73□□□□□ -0.21
MAP1LC3B-206ENST00000564844 FP248Q71RG6 208 aaPredicted RBP13.73□□□□□ -0.21
MAP1LC3B-206ENST00000564844 COX7BP24311 80 aa13.72□□□□□ -0.21
MAP1LC3B-206ENST00000564844 STAB1Q9NY15 2570 aa13.71□□□□□ -0.21
MAP1LC3B-206ENST00000564844 KLKP1Q107X0 134 aa13.71□□□□□ -0.21
MAP1LC3B-206ENST00000564844 LINC00612Q8N6U2 182 aa13.71□□□□□ -0.22
MAP1LC3B-206ENST00000564844 NREPQ16612 68 aa13.7□□□□□ -0.22
MAP1LC3B-206ENST00000564844 ANK3Q12955 4377 aaKnown RBP13.69□□□□□ -0.22
MAP1LC3B-206ENST00000564844 TENM3Q9P273 2699 aa13.69□□□□□ -0.22
MAP1LC3B-206ENST00000564844 TRBV7-6A0A0J9YX20 115 aa13.69□□□□□ -0.22
MAP1LC3B-206ENST00000564844 MIFP14174 115 aa13.69□□□□□ -0.22
MAP1LC3B-206ENST00000564844 NSD1Q96L73 2696 aaPredicted RBP13.67□□□□□ -0.22
MAP1LC3B-206ENST00000564844 COL6A5A8TX70 2615 aa13.67□□□□□ -0.22
MAP1LC3B-206ENST00000564844 BRK1Q8WUW1 75 aa13.67□□□□□ -0.22
MAP1LC3B-206ENST00000564844 CAMK2N2Q96S95 79 aa13.67□□□□□ -0.22
MAP1LC3B-206ENST00000564844 CXCL6P80162 114 aa13.66□□□□□ -0.22
MAP1LC3B-206ENST00000564844 LRCOL1A6NCL2 159 aa13.65□□□□□ -0.22
MAP1LC3B-206ENST00000564844 FAM229BQ4G0N7 80 aa13.65□□□□□ -0.22
MAP1LC3B-206ENST00000564844 A0A0J9YWU9 116 aa13.65□□□□□ -0.22
MAP1LC3B-206ENST00000564844 IGHV4-30-4P0DP06 118 aa13.65□□□□□ -0.22
MAP1LC3B-206ENST00000564844 TMEM254Q8TBM7 123 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1556.5 ms